Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30n21
(689 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB209289-1|BAD92526.1| 369|Homo sapiens beta isoform of regulat... 35 0.31
BC115026-1|AAI15027.1| 1339|Homo sapiens claspin homolog (Xenopu... 32 2.2
BC115025-1|AAI15026.1| 1275|Homo sapiens CLSPN protein protein. 31 2.9
BC113116-1|AAI13117.1| 1339|Homo sapiens claspin protein. 31 2.9
AL354864-2|CAH73807.1| 1331|Homo sapiens claspin homolog (Xenopu... 31 2.9
AF297866-1|AAG24515.1| 1332|Homo sapiens Hu-Claspin protein. 31 2.9
BC113474-1|AAI13475.1| 262|Homo sapiens cerebellar degeneration... 30 8.9
BC113472-1|AAI13473.1| 262|Homo sapiens cerebellar degeneration... 30 8.9
BC078171-1|AAH78171.1| 399|Homo sapiens telomeric repeat bindin... 30 8.9
BC041560-1|AAH41560.1| 859|Homo sapiens ABCC4 protein protein. 30 8.9
BC022428-1|AAH22428.1| 399|Homo sapiens telomeric repeat bindin... 30 8.9
BC016739-1|AAH16739.1| 339|Homo sapiens TERF2IP protein protein. 30 8.9
BC005841-1|AAH05841.1| 399|Homo sapiens telomeric repeat bindin... 30 8.9
BC004465-1|AAH04465.1| 399|Homo sapiens telomeric repeat bindin... 30 8.9
AY207008-1|AAO37649.1| 1325|Homo sapiens ATP-binding cassette tr... 30 8.9
AY081219-1|AAL88745.1| 1325|Homo sapiens multidrug resistance-as... 30 8.9
AL356257-1|CAI16722.1| 1325|Homo sapiens ATP-binding cassette, s... 30 8.9
AL157818-1|CAC36037.2| 1325|Homo sapiens ATP-binding cassette, s... 30 8.9
AL139381-1|CAI16589.1| 1325|Homo sapiens ATP-binding cassette, s... 30 8.9
AL078639-1|CAI42370.1| 262|Homo sapiens cerebellar degeneration... 30 8.9
AF541977-1|AAN17334.1| 1278|Homo sapiens ATP-binding cassette pr... 30 8.9
AF262988-1|AAF72711.1| 399|Homo sapiens TRF2-interacting telome... 30 8.9
AF250393-1|AAQ14259.1| 399|Homo sapiens dopamine receptor inter... 30 8.9
AF071203-1|AAC27077.1| 893|Homo sapiens ABC transporter MOAT-B ... 30 8.9
AF071202-1|AAC27076.1| 1325|Homo sapiens ABC transporter MOAT-B ... 30 8.9
AB208973-1|BAD92210.1| 776|Homo sapiens ABCC4 protein variant p... 30 8.9
>AB209289-1|BAD92526.1| 369|Homo sapiens beta isoform of regulatory
subunit B56, protein phosphatase 2A variant protein.
Length = 369
Score = 34.7 bits (76), Expect = 0.31
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 117 PRAHDNR*ASERLPCRAPQQSTRVPPGSAHTS 212
PR +N SE LPCR T++PP S TS
Sbjct: 9 PRPRENPRGSESLPCRLTAMETKLPPASTPTS 40
>BC115026-1|AAI15027.1| 1339|Homo sapiens claspin homolog (Xenopus
laevis) protein.
Length = 1339
Score = 31.9 bits (69), Expect = 2.2
Identities = 19/82 (23%), Positives = 43/82 (52%)
Frame = +1
Query: 421 FKVQSSEFGDSESLSDKEHSAESQEDGVHKIDLEAFGRQLKLVLKKQEGLIKKDGLKVWK 600
FK+ + + + E ++E + ES+EDG K++ E +L+ +K+E ++ + +
Sbjct: 620 FKLDNEDGFEEEEQEEEEMTDESEEDGEEKVEKEEKEEELEEEEEKEEEEEEEGNQETAE 679
Query: 601 ALKNETQPHGVDYEEMITEDDE 666
L + + D +EM E+++
Sbjct: 680 FLLSSEEIETKDEKEMDKENND 701
>BC115025-1|AAI15026.1| 1275|Homo sapiens CLSPN protein protein.
Length = 1275
Score = 31.5 bits (68), Expect = 2.9
Identities = 19/82 (23%), Positives = 43/82 (52%)
Frame = +1
Query: 421 FKVQSSEFGDSESLSDKEHSAESQEDGVHKIDLEAFGRQLKLVLKKQEGLIKKDGLKVWK 600
FK+ + + + E ++E + ES+EDG K++ E +L+ +K+E ++ + +
Sbjct: 556 FKLDNEDGFEEEEEEEEEMTDESEEDGEEKVEKEEKEEELEEEEEKEEEEEEEGNQETAE 615
Query: 601 ALKNETQPHGVDYEEMITEDDE 666
L + + D +EM E+++
Sbjct: 616 FLLSSEEIETKDEKEMDKENND 637
>BC113116-1|AAI13117.1| 1339|Homo sapiens claspin protein.
Length = 1339
Score = 31.5 bits (68), Expect = 2.9
Identities = 19/82 (23%), Positives = 43/82 (52%)
Frame = +1
Query: 421 FKVQSSEFGDSESLSDKEHSAESQEDGVHKIDLEAFGRQLKLVLKKQEGLIKKDGLKVWK 600
FK+ + + + E ++E + ES+EDG K++ E +L+ +K+E ++ + +
Sbjct: 620 FKLDNEDGFEEEEEEEEEMTDESEEDGEEKVEKEEKEEELEEEEEKEEEEEEEGNQETAE 679
Query: 601 ALKNETQPHGVDYEEMITEDDE 666
L + + D +EM E+++
Sbjct: 680 FLLSSEEIETKDEKEMDKENND 701
>AL354864-2|CAH73807.1| 1331|Homo sapiens claspin homolog (Xenopus
laevis) protein.
Length = 1331
Score = 31.5 bits (68), Expect = 2.9
Identities = 19/82 (23%), Positives = 43/82 (52%)
Frame = +1
Query: 421 FKVQSSEFGDSESLSDKEHSAESQEDGVHKIDLEAFGRQLKLVLKKQEGLIKKDGLKVWK 600
FK+ + + + E ++E + ES+EDG K++ E +L+ +K+E ++ + +
Sbjct: 619 FKLDNEDGFEEEEEEEEEMTDESEEDGEEKVEKEEKEEELEEEEEKEEEEEEEGNQETAE 678
Query: 601 ALKNETQPHGVDYEEMITEDDE 666
L + + D +EM E+++
Sbjct: 679 FLLSSEEIETKDEKEMDKENND 700
>AF297866-1|AAG24515.1| 1332|Homo sapiens Hu-Claspin protein.
Length = 1332
Score = 31.5 bits (68), Expect = 2.9
Identities = 19/82 (23%), Positives = 42/82 (51%)
Frame = +1
Query: 421 FKVQSSEFGDSESLSDKEHSAESQEDGVHKIDLEAFGRQLKLVLKKQEGLIKKDGLKVWK 600
FK+ + + + E ++E + ES+EDG K++ E +L+ K+E ++ + +
Sbjct: 620 FKLDNEDGSEEEEEEEEEMTDESEEDGEEKVEKEEKEEELEEEEGKEEEEEEEGNQETAE 679
Query: 601 ALKNETQPHGVDYEEMITEDDE 666
L + + D +EM E+++
Sbjct: 680 FLLSSEEIETKDEKEMDKENND 701
>BC113474-1|AAI13475.1| 262|Homo sapiens cerebellar
degeneration-related protein 1, 34kDa protein.
Length = 262
Score = 29.9 bits (64), Expect = 8.9
Identities = 16/58 (27%), Positives = 24/58 (41%)
Frame = +1
Query: 334 LNDEMFVEAKKRIEDVDIMGDPNSTVSVDFKVQSSEFGDSESLSDKEHSAESQEDGVH 507
L D +E +ED D + DP+ ++D + D +SL D E G H
Sbjct: 88 LEDMALLEDVDLLEDTDFLEDPDFLEAIDLREDKDFLEDMDSLEDLEAIGRCGFSGRH 145
>BC113472-1|AAI13473.1| 262|Homo sapiens cerebellar
degeneration-related protein 1, 34kDa protein.
Length = 262
Score = 29.9 bits (64), Expect = 8.9
Identities = 16/58 (27%), Positives = 24/58 (41%)
Frame = +1
Query: 334 LNDEMFVEAKKRIEDVDIMGDPNSTVSVDFKVQSSEFGDSESLSDKEHSAESQEDGVH 507
L D +E +ED D + DP+ ++D + D +SL D E G H
Sbjct: 88 LEDMALLEDVDLLEDTDFLEDPDFLEAIDLREDKDFLEDMDSLEDLEAIGRCGFSGRH 145
>BC078171-1|AAH78171.1| 399|Homo sapiens telomeric repeat binding
factor 2, interacting protein protein.
Length = 399
Score = 29.9 bits (64), Expect = 8.9
Identities = 28/144 (19%), Positives = 58/144 (40%), Gaps = 3/144 (2%)
Frame = +1
Query: 142 LRNVFHVEHHSRVPEYHLVQLTHHLARRNIPTSHPANSNSADSGKTPHLKTEKVTKGGYK 321
L+++ EH + + + + L R+ A+S + +TP L E+ K +
Sbjct: 185 LKHLRGQEHKYLLGDAPVSPSSQKLKRKAEEDPEAADSGEPQNKRTPDLPEEEYVKEEIQ 244
Query: 322 APSLLNDEMFVEAKKRIEDVDIMGDPNSTVSVDFKVQSSEFGDSESLSDKEHSA---ESQ 492
+M VEA + E+V + P DF++ + D +++ E +
Sbjct: 245 ENEEAVKKMLVEATREFEEVVVDESP-----PDFEIHITMCDDDPPTPEEDSETQPDEEE 299
Query: 493 EDGVHKIDLEAFGRQLKLVLKKQE 564
E+ K+ G +K++ + E
Sbjct: 300 EEEEEKVSQPEVGAAIKIIRQLME 323
>BC041560-1|AAH41560.1| 859|Homo sapiens ABCC4 protein protein.
Length = 859
Score = 29.9 bits (64), Expect = 8.9
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 535 QLKLVLKKQEGLIKKDGLKVWKALKNETQPHGVDYEEMITEDDEE 669
QL+ + + LI KDG V K E G+D+ ++ +D+EE
Sbjct: 593 QLQYLKAASQILILKDGKMVQKGTYTEFLKSGIDFGSLLKKDNEE 637
>BC022428-1|AAH22428.1| 399|Homo sapiens telomeric repeat binding
factor 2, interacting protein protein.
Length = 399
Score = 29.9 bits (64), Expect = 8.9
Identities = 28/144 (19%), Positives = 58/144 (40%), Gaps = 3/144 (2%)
Frame = +1
Query: 142 LRNVFHVEHHSRVPEYHLVQLTHHLARRNIPTSHPANSNSADSGKTPHLKTEKVTKGGYK 321
L+++ EH + + + + L R+ A+S + +TP L E+ K +
Sbjct: 185 LKHLRGQEHKYLLGDAPVSPSSQKLKRKAEEDPEAADSGEPQNKRTPDLPEEEYVKEEIQ 244
Query: 322 APSLLNDEMFVEAKKRIEDVDIMGDPNSTVSVDFKVQSSEFGDSESLSDKEHSA---ESQ 492
+M VEA + E+V + P DF++ + D +++ E +
Sbjct: 245 ENEEAVKKMLVEATREFEEVVVDESP-----PDFEIHITMCDDDPPTPEEDSETQPDEEE 299
Query: 493 EDGVHKIDLEAFGRQLKLVLKKQE 564
E+ K+ G +K++ + E
Sbjct: 300 EEEEEKVSQPEVGAAIKIIRQLME 323
>BC016739-1|AAH16739.1| 339|Homo sapiens TERF2IP protein protein.
Length = 339
Score = 29.9 bits (64), Expect = 8.9
Identities = 28/144 (19%), Positives = 58/144 (40%), Gaps = 3/144 (2%)
Frame = +1
Query: 142 LRNVFHVEHHSRVPEYHLVQLTHHLARRNIPTSHPANSNSADSGKTPHLKTEKVTKGGYK 321
L+++ EH + + + + L R+ A+S + +TP L E+ K +
Sbjct: 185 LKHLRGQEHKYLLGDAPVSPSSQKLKRKAEEDPEAADSGEPQNKRTPDLPEEEYVKEEIQ 244
Query: 322 APSLLNDEMFVEAKKRIEDVDIMGDPNSTVSVDFKVQSSEFGDSESLSDKEHSA---ESQ 492
+M VEA + E+V + P DF++ + D +++ E +
Sbjct: 245 ENEEAVKKMLVEATREFEEVVVDESP-----PDFEIHITMCDDDPPTPEEDSETQPDEEE 299
Query: 493 EDGVHKIDLEAFGRQLKLVLKKQE 564
E+ K+ G +K++ + E
Sbjct: 300 EEEEEKVSQPEVGAAIKIIRQLME 323
>BC005841-1|AAH05841.1| 399|Homo sapiens telomeric repeat binding
factor 2, interacting protein protein.
Length = 399
Score = 29.9 bits (64), Expect = 8.9
Identities = 28/144 (19%), Positives = 58/144 (40%), Gaps = 3/144 (2%)
Frame = +1
Query: 142 LRNVFHVEHHSRVPEYHLVQLTHHLARRNIPTSHPANSNSADSGKTPHLKTEKVTKGGYK 321
L+++ EH + + + + L R+ A+S + +TP L E+ K +
Sbjct: 185 LKHLRGQEHKYLLGDAPVSPSSQKLKRKAEEDPEAADSGEPQNKRTPDLPEEEYVKEEIQ 244
Query: 322 APSLLNDEMFVEAKKRIEDVDIMGDPNSTVSVDFKVQSSEFGDSESLSDKEHSA---ESQ 492
+M VEA + E+V + P DF++ + D +++ E +
Sbjct: 245 ENEEAVKKMLVEATREFEEVVVDESP-----PDFEIHITMCDDDPPTPEEDSETQPDEEE 299
Query: 493 EDGVHKIDLEAFGRQLKLVLKKQE 564
E+ K+ G +K++ + E
Sbjct: 300 EEEEEKVSQPEVGAAIKIIRQLME 323
>BC004465-1|AAH04465.1| 399|Homo sapiens telomeric repeat binding
factor 2, interacting protein protein.
Length = 399
Score = 29.9 bits (64), Expect = 8.9
Identities = 28/144 (19%), Positives = 58/144 (40%), Gaps = 3/144 (2%)
Frame = +1
Query: 142 LRNVFHVEHHSRVPEYHLVQLTHHLARRNIPTSHPANSNSADSGKTPHLKTEKVTKGGYK 321
L+++ EH + + + + L R+ A+S + +TP L E+ K +
Sbjct: 185 LKHLRGQEHKYLLGDAPVSPSSQKLKRKAEEDPEAADSGEPQNKRTPDLPEEEYVKEEIQ 244
Query: 322 APSLLNDEMFVEAKKRIEDVDIMGDPNSTVSVDFKVQSSEFGDSESLSDKEHSA---ESQ 492
+M VEA + E+V + P DF++ + D +++ E +
Sbjct: 245 ENEEAVKKMLVEATREFEEVVVDESP-----PDFEIHITMCDDDPPTPEEDSETQPDEEE 299
Query: 493 EDGVHKIDLEAFGRQLKLVLKKQE 564
E+ K+ G +K++ + E
Sbjct: 300 EEEEEKVSQPEVGAAIKIIRQLME 323
>AY207008-1|AAO37649.1| 1325|Homo sapiens ATP-binding cassette
transporter C4 protein.
Length = 1325
Score = 29.9 bits (64), Expect = 8.9
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 535 QLKLVLKKQEGLIKKDGLKVWKALKNETQPHGVDYEEMITEDDEE 669
QL+ + + LI KDG V K E G+D+ ++ +D+EE
Sbjct: 593 QLQYLKAASQILILKDGKMVQKGTYTEFLKSGIDFGSLLKKDNEE 637
>AY081219-1|AAL88745.1| 1325|Homo sapiens multidrug
resistance-associated protein protein.
Length = 1325
Score = 29.9 bits (64), Expect = 8.9
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 535 QLKLVLKKQEGLIKKDGLKVWKALKNETQPHGVDYEEMITEDDEE 669
QL+ + + LI KDG V K E G+D+ ++ +D+EE
Sbjct: 593 QLQYLKAASQILILKDGKMVQKGTYTEFLKSGIDFGSLLKKDNEE 637
>AL356257-1|CAI16722.1| 1325|Homo sapiens ATP-binding cassette,
sub-family C (CFTR/MRP), member 4 protein.
Length = 1325
Score = 29.9 bits (64), Expect = 8.9
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 535 QLKLVLKKQEGLIKKDGLKVWKALKNETQPHGVDYEEMITEDDEE 669
QL+ + + LI KDG V K E G+D+ ++ +D+EE
Sbjct: 593 QLQYLKAASQILILKDGKMVQKGTYTEFLKSGIDFGSLLKKDNEE 637
>AL157818-1|CAC36037.2| 1325|Homo sapiens ATP-binding cassette,
sub-family C (CFTR/MRP), member 4 protein.
Length = 1325
Score = 29.9 bits (64), Expect = 8.9
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 535 QLKLVLKKQEGLIKKDGLKVWKALKNETQPHGVDYEEMITEDDEE 669
QL+ + + LI KDG V K E G+D+ ++ +D+EE
Sbjct: 593 QLQYLKAASQILILKDGKMVQKGTYTEFLKSGIDFGSLLKKDNEE 637
>AL139381-1|CAI16589.1| 1325|Homo sapiens ATP-binding cassette,
sub-family C (CFTR/MRP), member 4 protein.
Length = 1325
Score = 29.9 bits (64), Expect = 8.9
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 535 QLKLVLKKQEGLIKKDGLKVWKALKNETQPHGVDYEEMITEDDEE 669
QL+ + + LI KDG V K E G+D+ ++ +D+EE
Sbjct: 593 QLQYLKAASQILILKDGKMVQKGTYTEFLKSGIDFGSLLKKDNEE 637
>AL078639-1|CAI42370.1| 262|Homo sapiens cerebellar
degeneration-related protein 1, 34kDa protein.
Length = 262
Score = 29.9 bits (64), Expect = 8.9
Identities = 16/58 (27%), Positives = 24/58 (41%)
Frame = +1
Query: 334 LNDEMFVEAKKRIEDVDIMGDPNSTVSVDFKVQSSEFGDSESLSDKEHSAESQEDGVH 507
L D +E +ED D + DP+ ++D + D +SL D E G H
Sbjct: 88 LEDMALLEDVDLLEDTDFLEDPDFLEAIDLREDKDFLEDMDSLEDLEAIGRCGFSGRH 145
>AF541977-1|AAN17334.1| 1278|Homo sapiens ATP-binding cassette
protein C4 splice variant A protein.
Length = 1278
Score = 29.9 bits (64), Expect = 8.9
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 535 QLKLVLKKQEGLIKKDGLKVWKALKNETQPHGVDYEEMITEDDEE 669
QL+ + + LI KDG V K E G+D+ ++ +D+EE
Sbjct: 593 QLQYLKAASQILILKDGKMVQKGTYTEFLKSGIDFGSLLKKDNEE 637
>AF262988-1|AAF72711.1| 399|Homo sapiens TRF2-interacting telomeric
RAP1 protein protein.
Length = 399
Score = 29.9 bits (64), Expect = 8.9
Identities = 28/144 (19%), Positives = 58/144 (40%), Gaps = 3/144 (2%)
Frame = +1
Query: 142 LRNVFHVEHHSRVPEYHLVQLTHHLARRNIPTSHPANSNSADSGKTPHLKTEKVTKGGYK 321
L+++ EH + + + + L R+ A+S + +TP L E+ K +
Sbjct: 185 LKHLRGQEHKYLLGDAPVSPSSQKLKRKAEEDPEAADSGEPQNKRTPDLPEEEYVKEEIQ 244
Query: 322 APSLLNDEMFVEAKKRIEDVDIMGDPNSTVSVDFKVQSSEFGDSESLSDKEHSA---ESQ 492
+M VEA + E+V + P DF++ + D +++ E +
Sbjct: 245 ENEEAVKKMLVEATREFEEVVVDESP-----PDFEIHITMCDDDPPTPEEDSETQPDEEE 299
Query: 493 EDGVHKIDLEAFGRQLKLVLKKQE 564
E+ K+ G +K++ + E
Sbjct: 300 EEEEEKVSQPEVGAAIKIIRQLME 323
>AF250393-1|AAQ14259.1| 399|Homo sapiens dopamine receptor
interacting protein 5 protein.
Length = 399
Score = 29.9 bits (64), Expect = 8.9
Identities = 28/144 (19%), Positives = 58/144 (40%), Gaps = 3/144 (2%)
Frame = +1
Query: 142 LRNVFHVEHHSRVPEYHLVQLTHHLARRNIPTSHPANSNSADSGKTPHLKTEKVTKGGYK 321
L+++ EH + + + + L R+ A+S + +TP L E+ K +
Sbjct: 185 LKHLRGQEHKYLLGDAPVSPSSQKLKRKAEEDPEAADSGEPQNKRTPDLPEEEYVKEEIQ 244
Query: 322 APSLLNDEMFVEAKKRIEDVDIMGDPNSTVSVDFKVQSSEFGDSESLSDKEHSA---ESQ 492
+M VEA + E+V + P DF++ + D +++ E +
Sbjct: 245 ENEEAVKKMLVEATREFEEVVVDESP-----PDFEIHITMCDDDPPTPEEDSETQPDEEE 299
Query: 493 EDGVHKIDLEAFGRQLKLVLKKQE 564
E+ K+ G +K++ + E
Sbjct: 300 EEEEEKVSQPEVGAAIKIIRQLME 323
>AF071203-1|AAC27077.1| 893|Homo sapiens ABC transporter MOAT-B
isoform protein.
Length = 893
Score = 29.9 bits (64), Expect = 8.9
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 535 QLKLVLKKQEGLIKKDGLKVWKALKNETQPHGVDYEEMITEDDEE 669
QL+ + + LI KDG V K E G+D+ ++ +D+EE
Sbjct: 183 QLQYLKAASQILILKDGKMVQKGTYTEFLKSGIDFGSLLKKDNEE 227
>AF071202-1|AAC27076.1| 1325|Homo sapiens ABC transporter MOAT-B
protein.
Length = 1325
Score = 29.9 bits (64), Expect = 8.9
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 535 QLKLVLKKQEGLIKKDGLKVWKALKNETQPHGVDYEEMITEDDEE 669
QL+ + + LI KDG V K E G+D+ ++ +D+EE
Sbjct: 593 QLQYLKAASQILILKDGKMVQKGTYTEFLKSGIDFGSLLKKDNEE 637
>AB208973-1|BAD92210.1| 776|Homo sapiens ABCC4 protein variant
protein.
Length = 776
Score = 29.9 bits (64), Expect = 8.9
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 535 QLKLVLKKQEGLIKKDGLKVWKALKNETQPHGVDYEEMITEDDEE 669
QL+ + + LI KDG V K E G+D+ ++ +D+EE
Sbjct: 510 QLQYLKAASQILILKDGKMVQKGTYTEFLKSGIDFGSLLKKDNEE 554
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.315 0.132 0.382
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,899,793
Number of Sequences: 237096
Number of extensions: 2208766
Number of successful extensions: 5183
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 4930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5183
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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