Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30n19
         (673 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    25   0.87 
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    24   1.1  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    24   1.1  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    23   2.6  
AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    22   6.1  
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    22   6.1  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    21   8.1  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    21   8.1  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      21   8.1  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 575 NPAVGNFGDFIPALNRARQSGLKVTL 652
           +P  G   DF   + RA+  GLKV L
Sbjct: 93  DPVYGTLADFDRLVRRAKSLGLKVIL 118


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 6/46 (13%)
 Frame = -2

Query: 660 PQCSVTLSPDCLALFKAGIKSPKFP------TAGLPLNSIPTTVSG 541
           PQ  + + PD  +L   G  SP  P      TAG   N + T+ SG
Sbjct: 44  PQSPLDMKPDTASLINPGNFSPSGPNSPGSFTAGCHSNLLSTSPSG 89


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 6/46 (13%)
 Frame = -2

Query: 660 PQCSVTLSPDCLALFKAGIKSPKFP------TAGLPLNSIPTTVSG 541
           PQ  + + PD  +L   G  SP  P      TAG   N + T+ SG
Sbjct: 44  PQSPLDMKPDTASLINPGNFSPSGPNSPGSFTAGCHSNLLSTSPSG 89


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 415 PYNTINILLLCYVLCVTWST 356
           P N IN++LL  ++ + W T
Sbjct: 76  PVNNINLILLQNIIDICWIT 95



 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -3

Query: 248 ILGNILINFLYLQ 210
           ILG+IL+ F Y+Q
Sbjct: 373 ILGSILVPFFYVQ 385


>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 6/14 (42%), Positives = 13/14 (92%)
 Frame = +3

Query: 3   FLKNAKLLLIESFL 44
           F+KNA+++L+E ++
Sbjct: 92  FVKNARMILLEEYI 105


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 6/14 (42%), Positives = 13/14 (92%)
 Frame = +3

Query: 3   FLKNAKLLLIESFL 44
           F+KNA+++L+E ++
Sbjct: 66  FVKNARMILLEEYI 79


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = -3

Query: 671 CILLHNAVLL*VQIVLLYSKLV*NLQN 591
           CI +   V+  + I+L YS+L+ +++N
Sbjct: 223 CIFIWAYVIPLIFIILFYSRLLSSIRN 249


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = -3

Query: 671 CILLHNAVLL*VQIVLLYSKLV*NLQN 591
           CI +   V+  + I+L YS+L+ +++N
Sbjct: 223 CIFIWAYVIPLIFIILFYSRLLSSIRN 249


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = -3

Query: 407 YYQYIASLLCTVCHVEYFSAQYNNTH 330
           ++Q + S +C +CH  + +    N H
Sbjct: 395 HFQPLNSAVCALCHKVFRTLNSLNNH 420


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,406
Number of Sequences: 438
Number of extensions: 4025
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)