Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30n18
         (692 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81593-5|CAB04743.1|  332|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z81041-6|CAB02788.1|  336|Caenorhabditis elegans Hypothetical pr...    29   4.2  
AC024759-7|AAP13762.1|  483|Caenorhabditis elegans Hypothetical ...    28   5.5  
Z37092-11|CAA85461.2|  334|Caenorhabditis elegans Hypothetical p...    28   7.3  
AL110477-1|CAB54325.1|  331|Caenorhabditis elegans Hypothetical ...    28   7.3  
Z83220-1|CAB05700.2|  440|Caenorhabditis elegans Hypothetical pr...    27   9.6  
Z74043-9|CAA98540.1|  524|Caenorhabditis elegans Hypothetical pr...    27   9.6  
Z50874-9|CAA90769.1|  202|Caenorhabditis elegans Hypothetical pr...    27   9.6  
AL032624-2|CAA21520.2|  447|Caenorhabditis elegans Hypothetical ...    27   9.6  
AF100663-1|AAC68979.2|  173|Caenorhabditis elegans Hypothetical ...    27   9.6  
AF040997-1|AAB97173.1|  524|Caenorhabditis elegans importin alph...    27   9.6  

>Z81593-5|CAB04743.1|  332|Caenorhabditis elegans Hypothetical
           protein T20B3.5 protein.
          Length = 332

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +3

Query: 213 IPQRFNIFRYFLLEVSKRYFCYISVVFVTCTSHCTVYSF 329
           +P   ++ R F L ++KRYF     VF+ CT    V+ F
Sbjct: 175 VPPYVDLERVFYLIITKRYFLITCAVFI-CTMFAEVWFF 212


>Z81041-6|CAB02788.1|  336|Caenorhabditis elegans Hypothetical
           protein C27A7.7 protein.
          Length = 336

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +1

Query: 148 GGVFCIFVYHFPFS*LIDL 204
           G  FC+FV H PFS  +DL
Sbjct: 70  GNTFCVFVTHGPFSNYLDL 88


>AC024759-7|AAP13762.1|  483|Caenorhabditis elegans Hypothetical
           protein Y37E11AR.7 protein.
          Length = 483

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = +3

Query: 195 YRPPVFIPQRFN-IFRYFLLEVSKRYFCYISVVFVTCTSHCTV 320
           Y+   +  +  N +FR F LE    YFCY S   +  T H  V
Sbjct: 406 YKDRAYFDEETNLVFRKFALEDDDEYFCYSSNNILLGTFHMRV 448


>Z37092-11|CAA85461.2|  334|Caenorhabditis elegans Hypothetical
           protein F44F4.13 protein.
          Length = 334

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
 Frame = +2

Query: 125 ICYTKVHVAGYSVSLYTISLFLDL--*TSSVHTTAF 226
           +C +  H+  YS  LYT +LFL+L   T+S+  T F
Sbjct: 7   VCASDAHMEMYSSKLYTSALFLNLIIATTSMILTGF 42


>AL110477-1|CAB54325.1|  331|Caenorhabditis elegans Hypothetical
           protein Y113G7B.2 protein.
          Length = 331

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +3

Query: 213 IPQRFNIFRYFLLEVSKRYFCYISVVFVTCTSHCTVYSF 329
           IP    I R F L + KRYF     VF+ C +   V+ F
Sbjct: 175 IPPYVEIDRMFYLTMKKRYFLITCAVFI-CITFAEVWLF 212


>Z83220-1|CAB05700.2|  440|Caenorhabditis elegans Hypothetical
           protein C34B7.1 protein.
          Length = 440

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
 Frame = +1

Query: 103 CLELASLNL--LYQGTCGGVFCIFVYH----FPFS*LIDLQCSYHSVLTFSDIFCWKSVN 264
           C E +++N      GTC G FC FV       P    +   C+  S+L+F D   + ++N
Sbjct: 321 CTECSAVNSDDCSGGTCQGRFCTFVRSKNQLDPTKSTVKKSCATTSILSFPDNSAYTNIN 380


>Z74043-9|CAA98540.1|  524|Caenorhabditis elegans Hypothetical
           protein T19B10.7 protein.
          Length = 524

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
 Frame = -1

Query: 599 CFKLDSHCSIFTAECYAIYTALLYINNVNSSDFLILTDSKSSLLALESDPFRFNMNYIIY 420
           C KLD  CS    E   +   +   N + S+D ++ TD+ SS  +L   P  ++    + 
Sbjct: 225 CEKLD-RCSPHVDEIAPLLEIIS--NGIQSTDAMVQTDAASSCASLAEWPPIYHYMSDLK 281

Query: 419 RIKEILANL-NERG 381
              +++ANL N++G
Sbjct: 282 LCSKLVANLRNDKG 295


>Z50874-9|CAA90769.1|  202|Caenorhabditis elegans Hypothetical
           protein R10E4.9 protein.
          Length = 202

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 5/36 (13%)
 Frame = +3

Query: 123 KFVIPRYMW-----RGILYLCIPFPFFLTYRPPVFI 215
           +F  P  MW       + YL IPF FFLT   PV +
Sbjct: 35  EFKYPEIMWFLLFITSLQYLDIPFSFFLTKSNPVAV 70


>AL032624-2|CAA21520.2|  447|Caenorhabditis elegans Hypothetical
           protein Y49A10A.1 protein.
          Length = 447

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 22/100 (22%), Positives = 41/100 (41%), Gaps = 6/100 (6%)
 Frame = -1

Query: 629 YYDPQLKKSRCFKLDSHCSIFTAECYAIYTALLYINNVNSSDFLILTDSKSSLLALESDP 450
           +  P + K RC  +D+   ++       Y     I N+N       TD +  L  +++  
Sbjct: 347 FNSPSILKFRCTMVDAPSVLYGLHFLLYYDVNRRIVNINEEGRKTWTDGRVFLKDVDAST 406

Query: 449 F---RFNMNYIIYRIK---EILANLNERGKNVQFKWVPAH 348
           F   +F    I+   K    ++ +  E GK +++K  P H
Sbjct: 407 FSENQFAPGRILQFFKWRFNLVQSSGETGKYLRWKQTPIH 446


>AF100663-1|AAC68979.2|  173|Caenorhabditis elegans Hypothetical
           protein K08B4.2 protein.
          Length = 173

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 9/36 (25%), Positives = 21/36 (58%)
 Frame = +3

Query: 270 FCYISVVFVTCTSHCTVYSFIAKNTTMSRYPFKLDI 377
           FC+++++F+T + + + + F   + T   + F  DI
Sbjct: 3   FCFVAILFLTVSQYGSAFEFQVLDYTPVEFSFNQDI 38


>AF040997-1|AAB97173.1|  524|Caenorhabditis elegans importin alpha 1
           protein.
          Length = 524

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
 Frame = -1

Query: 599 CFKLDSHCSIFTAECYAIYTALLYINNVNSSDFLILTDSKSSLLALESDPFRFNMNYIIY 420
           C KLD  CS    E   +   +   N + S+D ++ TD+ SS  +L   P  ++    + 
Sbjct: 225 CEKLD-RCSPHVDEIAPLLEIIS--NGIQSTDAMVQTDAASSCASLAEWPPIYHYMSDLK 281

Query: 419 RIKEILANL-NERG 381
              +++ANL N++G
Sbjct: 282 LCSKLVANLRNDKG 295


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,165,035
Number of Sequences: 27780
Number of extensions: 324292
Number of successful extensions: 874
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 874
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)