Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30n13
(761 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor p... 25 1.0
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 25 1.0
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 2.3
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 2.3
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 2.3
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 23 3.1
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 23 3.1
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 23 4.1
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 7.1
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 7.1
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 7.1
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 7.1
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 7.1
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 7.1
L10433-1|AAA27732.1| 149|Apis mellifera transposase protein. 21 9.4
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 9.4
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 9.4
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 21 9.4
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 9.4
>AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor
protein.
Length = 139
Score = 24.6 bits (51), Expect = 1.0
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -3
Query: 342 CNFSCLFCIFSILSTDVKSCFEQCI-SCFKKALT 244
CN + CI+++ S D + F+ I CF K T
Sbjct: 53 CNSAINPCIYALFSKDFRFAFKSIICKCFCKRRT 86
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 24.6 bits (51), Expect = 1.0
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -3
Query: 342 CNFSCLFCIFSILSTDVKSCFEQCI-SCFKKALT 244
CN + CI+++ S D + F+ I CF K T
Sbjct: 501 CNSAINPCIYALFSKDFRFAFKSIICKCFCKRRT 534
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.4 bits (48), Expect = 2.3
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3
Query: 705 SESVPLVDGRQSP*PSSGFGGVTGIHFLF 619
S+S+P +GR S PS GG +G H +F
Sbjct: 1777 SQSMPRQNGRYSRVPSQ--GGGSGTHNVF 1803
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.4 bits (48), Expect = 2.3
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +2
Query: 92 KCNKSVERQRARTFVTWYK 148
+C S Q F+TWYK
Sbjct: 351 RCEVSTHPQAGPHFITWYK 369
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.4 bits (48), Expect = 2.3
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +2
Query: 92 KCNKSVERQRARTFVTWYK 148
+C S Q F+TWYK
Sbjct: 351 RCEVSTHPQAGPHFITWYK 369
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = +1
Query: 343 QERRWNFSESSTFPRDKNRKARQKKAKFQLQP 438
+E WNF S F R ++ +++ L+P
Sbjct: 96 EEALWNFPMISVFSRQDIETIIRRNSRYPLRP 127
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 23.0 bits (47), Expect = 3.1
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = -1
Query: 746 LISATGHSMCHEICLNQFHLWMEDN 672
+I+A+ + +CH +C++ H + N
Sbjct: 284 MIAASVNLICHILCMSDLHWQLPHN 308
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 22.6 bits (46), Expect = 4.1
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +2
Query: 593 NGDGMGQKPKRKCIPVTPPNPE 658
N + QKPK + IP PN E
Sbjct: 141 NDEEEAQKPKEQYIPPELPNDE 162
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 7.1
Identities = 7/24 (29%), Positives = 16/24 (66%)
Frame = +1
Query: 358 NFSESSTFPRDKNRKARQKKAKFQ 429
++S + RD+NR+ R+K +++
Sbjct: 230 HYSRERSCSRDRNREYRKKDRRYE 253
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 7.1
Identities = 7/24 (29%), Positives = 16/24 (66%)
Frame = +1
Query: 358 NFSESSTFPRDKNRKARQKKAKFQ 429
++S + RD+NR+ R+K +++
Sbjct: 230 HYSRERSCSRDRNREYRKKDRRYE 253
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 7.1
Identities = 7/24 (29%), Positives = 16/24 (66%)
Frame = +1
Query: 358 NFSESSTFPRDKNRKARQKKAKFQ 429
++S + RD+NR+ R+K +++
Sbjct: 230 HYSRERSCSRDRNREYRKKDRRYE 253
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 7.1
Identities = 7/24 (29%), Positives = 16/24 (66%)
Frame = +1
Query: 358 NFSESSTFPRDKNRKARQKKAKFQ 429
++S + RD+NR+ R+K +++
Sbjct: 230 HYSRERSCSRDRNREYRKKDRRYE 253
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 7.1
Identities = 7/24 (29%), Positives = 16/24 (66%)
Frame = +1
Query: 358 NFSESSTFPRDKNRKARQKKAKFQ 429
++S + RD+NR+ R+K +++
Sbjct: 219 HYSRERSCSRDRNREYRKKDRRYE 242
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.8 bits (44), Expect = 7.1
Identities = 7/23 (30%), Positives = 15/23 (65%)
Frame = +1
Query: 361 FSESSTFPRDKNRKARQKKAKFQ 429
+S + RD+NR+ R+K +++
Sbjct: 231 YSRERSCSRDRNREYREKDRRYE 253
>L10433-1|AAA27732.1| 149|Apis mellifera transposase protein.
Length = 149
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -2
Query: 652 IWWCYWNTFSFWLLSHSITILTYINV 575
+WW Y F LLS + TI + + +
Sbjct: 70 VWWDYKGIVYFELLSPNRTINSVVYI 95
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 9.4
Identities = 7/23 (30%), Positives = 15/23 (65%)
Frame = +1
Query: 361 FSESSTFPRDKNRKARQKKAKFQ 429
+S + RD+NR+ R+K +++
Sbjct: 231 YSRERSCSRDRNREYRKKDRRYE 253
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.4 bits (43), Expect = 9.4
Identities = 7/23 (30%), Positives = 15/23 (65%)
Frame = +1
Query: 361 FSESSTFPRDKNRKARQKKAKFQ 429
+S + RD+NR+ R+K +++
Sbjct: 231 YSRERSCSRDRNREYRKKDRRYE 253
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.4 bits (43), Expect = 9.4
Identities = 7/23 (30%), Positives = 15/23 (65%)
Frame = +1
Query: 361 FSESSTFPRDKNRKARQKKAKFQ 429
+S + RD+NR+ R+K +++
Sbjct: 236 YSRERSCSRDRNREYRKKDRRYE 258
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.4 bits (43), Expect = 9.4
Identities = 7/23 (30%), Positives = 15/23 (65%)
Frame = +1
Query: 361 FSESSTFPRDKNRKARQKKAKFQ 429
+S + RD+NR+ R+K +++
Sbjct: 231 YSRERSCSRDRNREYRKKDRRYE 253
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,782
Number of Sequences: 438
Number of extensions: 4762
Number of successful extensions: 46
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -