Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30n10
(673 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0824 + 27980191-27980243,27980633-27980671,27980974-279820... 44 8e-05
07_03_1557 - 27699675-27699972,27700546-27700630,27700741-277008... 43 2e-04
10_08_0956 + 21796707-21797497,21799603-21799861,21799969-21800142 43 3e-04
03_05_0845 - 28155065-28155374,28156201-28156342,28156375-281565... 41 8e-04
11_01_0278 - 2068800-2068826,2070001-2070442,2070702-2072047 40 0.002
12_01_0273 - 1989058-1989349,1989730-1989837,1990315-1990508,199... 40 0.002
11_01_0272 - 2042490-2042781,2043146-2043203,2043385-2043401,204... 40 0.002
09_04_0367 - 16978069-16978085,16978514-16978611,16979069-169792... 37 0.013
08_02_0965 + 23078568-23079430,23079527-23079755,23079854-23080018 37 0.017
02_05_1265 - 35326506-35326773,35326944-35327109,35327194-353273... 33 0.21
02_05_1025 + 33588053-33589998,33590357-33590630,33591031-33591354 30 1.9
05_01_0084 + 562119-562411,562854-562902,563151-563162,563194-56... 28 7.8
>03_05_0824 +
27980191-27980243,27980633-27980671,27980974-27982023,
27983097-27983262,27983439-27983549,27983637-27983688,
27984691-27984859,27985604-27985883
Length = 639
Score = 44.4 bits (100), Expect = 8e-05
Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Frame = +2
Query: 230 GDTYDGYFEAKKKDRSVKMHGPGVYITAEGDSYKGVWENDRLGANDEVIIHFSDDARYEG 409
GD Y G F+ + HGPG Y+ +G Y G W+ ++ +I + A YEG
Sbjct: 38 GDIYVGSFDG------LVPHGPGKYMWTDGALYDGEWDKSKMTGRG--LIQWPSGASYEG 89
Query: 410 QLKDWSFWGPGKYYYPDGSVVRCDF--NDNCPVGNMVLSD 523
+ G G + DGSV + + N +G MV S+
Sbjct: 90 DFRGGFIDGAGTFKGVDGSVYKGSWRMNKKHGMGTMVYSN 129
Score = 38.7 bits (86), Expect = 0.004
Identities = 30/119 (25%), Positives = 49/119 (41%), Gaps = 1/119 (0%)
Frame = +2
Query: 209 GLFKHDTGDTYDGYFEAKKKDRSVKMHGPGVYITAEGDSYKGVWENDRLGANDEVIIH-F 385
G FK G Y G + KK HG G + + D+Y+G W G DE + +
Sbjct: 100 GTFKGVDGSVYKGSWRMNKK------HGMGTMVYSNSDTYEGFWNE---GLPDEFGKYTW 150
Query: 386 SDDARYEGQLKDWSFWGPGKYYYPDGSVVRCDFNDNCPVGNMVLSDPNGHVWLGKAELG 562
+D Y G+ K G G + +G + C++ + G +G ++G + G
Sbjct: 151 ADGNVYIGRWKSGKMNGSGVMQWINGDTLDCNWLNGLAHGKGYCKYASGACYIGTWDRG 209
>07_03_1557 -
27699675-27699972,27700546-27700630,27700741-27700847,
27700942-27701135,27701252-27701368,27701466-27701631,
27701723-27701887,27702185-27703428
Length = 791
Score = 43.2 bits (97), Expect = 2e-04
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 1/120 (0%)
Frame = +2
Query: 209 GLFKHDTGDTYDGYFEAKKKDRSVKMHGPGVYITAEGDSYKGVWE-NDRLGANDEVIIHF 385
G F +G TY+G F R M G G Y A GD+Y+G W N + G + +
Sbjct: 109 GRFSWPSGATYEGEF------RDGFMDGAGTYTGAAGDTYRGSWSMNLKHGHGKK---SY 159
Query: 386 SDDARYEGQLKDWSFWGPGKYYYPDGSVVRCDFNDNCPVGNMVLSDPNGHVWLGKAELGC 565
++ Y+G+ + G G+Y + +G+ + G L NG+ + G E GC
Sbjct: 160 ANGDHYDGEWRSGLQDGAGRYIWRNGTEYTGQWRGGLIHGRGALVWSNGNRYDGGWEDGC 219
Score = 40.7 bits (91), Expect = 0.001
Identities = 30/113 (26%), Positives = 43/113 (38%)
Frame = +2
Query: 209 GLFKHDTGDTYDGYFEAKKKDRSVKMHGPGVYITAEGDSYKGVWENDRLGANDEVIIHFS 388
G + GDTY G + K HG G A GD Y G W + I +
Sbjct: 132 GTYTGAAGDTYRGSWSMNLK------HGHGKKSYANGDHYDGEWRSGLQDGAGRYI--WR 183
Query: 389 DDARYEGQLKDWSFWGPGKYYYPDGSVVRCDFNDNCPVGNMVLSDPNGHVWLG 547
+ Y GQ + G G + +G+ + D CP G +G V++G
Sbjct: 184 NGTEYTGQWRGGLIHGRGALVWSNGNRYDGGWEDGCPRGQGTFRWADGSVYVG 236
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/92 (28%), Positives = 39/92 (42%)
Frame = +2
Query: 287 HGPGVYITAEGDSYKGVWENDRLGANDEVIIHFSDDARYEGQLKDWSFWGPGKYYYPDGS 466
HG G Y+ +G Y+G W + + A + A YEG+ +D G G Y G
Sbjct: 83 HGAGKYLWTDGCMYEGEWRHGK--ATGRGRFSWPSGATYEGEFRDGFMDGAGTYTGAAGD 140
Query: 467 VVRCDFNDNCPVGNMVLSDPNGHVWLGKAELG 562
R ++ N G+ S NG + G+ G
Sbjct: 141 TYRGSWSMNLKHGHGKKSYANGDHYDGEWRSG 172
Score = 31.9 bits (69), Expect = 0.48
Identities = 18/77 (23%), Positives = 31/77 (40%)
Frame = +2
Query: 317 GDSYKGVWENDRLGANDEVIIHFSDDARYEGQLKDWSFWGPGKYYYPDGSVVRCDFNDNC 496
GD Y G W + + ++D YEG+ + G G++ +P G+ +F D
Sbjct: 70 GDFYTGQWRGGAPHGAGKYL--WTDGCMYEGEWRHGKATGRGRFSWPSGATYEGEFRDGF 127
Query: 497 PVGNMVLSDPNGHVWLG 547
G + G + G
Sbjct: 128 MDGAGTYTGAAGDTYRG 144
>10_08_0956 + 21796707-21797497,21799603-21799861,21799969-21800142
Length = 407
Score = 42.7 bits (96), Expect = 3e-04
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +2
Query: 287 HGPGVYITAEGDSYKGVWENDRLGANDEVIIHFSDD-ARYEGQLKDWSFWGPGKYYYPDG 463
HG GVY GD Y G W N G + +H +D +RY G+ K G G Y++ +G
Sbjct: 210 HGHGVYRFYTGDVYAGEWSN---GQSHGYGVHTCEDGSRYIGEFKRGVKHGLGHYHFRNG 266
Query: 464 SVVRCDFNDNCPVGNMVLSDPNGHVWLG 547
++ + G V S NGH + G
Sbjct: 267 DTYAGEYFADRMHGFGVYSFANGHRYEG 294
Score = 35.5 bits (78), Expect = 0.039
Identities = 21/48 (43%), Positives = 24/48 (50%)
Frame = +2
Query: 209 GLFKHDTGDTYDGYFEAKKKDRSVKMHGPGVYITAEGDSYKGVWENDR 352
G + GDTY G + A DR MHG GVY A G Y+G W R
Sbjct: 259 GHYHFRNGDTYAGEYFA---DR---MHGFGVYSFANGHRYEGAWHEGR 300
>03_05_0845 -
28155065-28155374,28156201-28156342,28156375-28156505,
28156591-28156784,28156859-28156969,28157234-28157399,
28157501-28157668,28157766-28158787
Length = 747
Score = 41.1 bits (92), Expect = 8e-04
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 3/121 (2%)
Frame = +2
Query: 209 GLFKHDTGDTYDGYFEAKKKDRSVKMHGPGVYITAEGDSYKGVWENDR---LGANDEVII 379
G F +G T++G F R ++ G GV++ +G +Y+G W DR +GA
Sbjct: 77 GRFSWPSGATFEGEF------RGGRIEGQGVFVGPDGATYRGAWAADRRHGVGAKS---- 126
Query: 380 HFSDDARYEGQLKDWSFWGPGKYYYPDGSVVRCDFNDNCPVGNMVLSDPNGHVWLGKAEL 559
+++ YEGQ + G G+Y + +G+ ++ G VL NG + G E
Sbjct: 127 -YANGDYYEGQWRRNLQDGHGRYVWANGNQYVGEWRAGVISGRGVLIWANGSRYDGVWEN 185
Query: 560 G 562
G
Sbjct: 186 G 186
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +2
Query: 287 HGPGVYITAEGDSYKGVWENDRLGANDEVIIHFSDDARYEGQLKDWSFWGPGKYYYPDGS 466
HG G Y+ A+G Y+G W + A+ + + A +EG+ + G G + PDG+
Sbjct: 51 HGKGKYVWADGCMYEGEWRRGK--ASGKGRFSWPSGATFEGEFRGGRIEGQGVFVGPDGA 108
Query: 467 VVR 475
R
Sbjct: 109 TYR 111
Score = 38.7 bits (86), Expect = 0.004
Identities = 24/86 (27%), Positives = 41/86 (47%)
Frame = +2
Query: 209 GLFKHDTGDTYDGYFEAKKKDRSVKMHGPGVYITAEGDSYKGVWENDRLGANDEVIIHFS 388
G + GD Y+G + +D G G Y+ A G+ Y G W + +I ++
Sbjct: 123 GAKSYANGDYYEGQWRRNLQD------GHGRYVWANGNQYVGEWRAGVISGRGVLI--WA 174
Query: 389 DDARYEGQLKDWSFWGPGKYYYPDGS 466
+ +RY+G ++ G G + +PDGS
Sbjct: 175 NGSRYDGVWENGVPRGTGVFTWPDGS 200
Score = 31.5 bits (68), Expect = 0.63
Identities = 18/77 (23%), Positives = 33/77 (42%)
Frame = +2
Query: 317 GDSYKGVWENDRLGANDEVIIHFSDDARYEGQLKDWSFWGPGKYYYPDGSVVRCDFNDNC 496
GD Y+G + + + ++D YEG+ + G G++ +P G+ +F
Sbjct: 38 GDVYRGGFAGGAPHGKGKYV--WADGCMYEGEWRRGKASGKGRFSWPSGATFEGEFRGGR 95
Query: 497 PVGNMVLSDPNGHVWLG 547
G V P+G + G
Sbjct: 96 IEGQGVFVGPDGATYRG 112
>11_01_0278 - 2068800-2068826,2070001-2070442,2070702-2072047
Length = 604
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/80 (31%), Positives = 37/80 (46%)
Frame = +2
Query: 230 GDTYDGYFEAKKKDRSVKMHGPGVYITAEGDSYKGVWENDRLGANDEVIIHFSDDARYEG 409
GD YDG++ +D G G YI G Y G W+ + VI ++D RY+G
Sbjct: 202 GDVYDGHWRDGLQD------GHGQYIWRGGHEYIGTWKAGEMHGRGTVI--WADGDRYDG 253
Query: 410 QLKDWSFWGPGKYYYPDGSV 469
+D G G + + DG +
Sbjct: 254 AWEDAKPKGQGTFRWSDGGM 273
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +2
Query: 281 KMHGPGVYITAEGDSYKGVWENDRLGANDEVIIHFSDDARYEGQ--LKDWSFWGPGKYYY 454
+MHG G I A+GD Y G WE+ + + +SD Y G + G G YY
Sbjct: 236 EMHGRGTVIWADGDRYDGAWEDAK--PKGQGTFRWSDGGMYIGLWCQESGETQGKGVYYP 293
Query: 455 PDG 463
P G
Sbjct: 294 PSG 296
Score = 37.5 bits (83), Expect = 0.010
Identities = 25/87 (28%), Positives = 34/87 (39%)
Frame = +2
Query: 287 HGPGVYITAEGDSYKGVWENDRLGANDEVIIHFSDDARYEGQLKDWSFWGPGKYYYPDGS 466
HG G Y+ +G Y+G W R + +S A YEG L G G Y G
Sbjct: 123 HGAGKYLWTDGSMYEGSWRGGRAAGRGK--FSWSSGAIYEGDLAGGYMHGQGTYIGELGD 180
Query: 467 VVRCDFNDNCPVGNMVLSDPNGHVWLG 547
+ +N G + NG V+ G
Sbjct: 181 TFAGLWANNLRHGRGTQAYVNGDVYDG 207
Score = 36.7 bits (81), Expect = 0.017
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 284 MHGPGVYITAEGDSYKGVWEND-RLGANDEVIIHFSDDARYEGQLKDWSFWGPGKYYYPD 460
MHG G YI GD++ G+W N+ R G + + + D Y+G +D G G+Y +
Sbjct: 168 MHGQGTYIGELGDTFAGLWANNLRHGRGTQAYV--NGDV-YDGHWRDGLQDGHGQYIWRG 224
Query: 461 G 463
G
Sbjct: 225 G 225
>12_01_0273 -
1989058-1989349,1989730-1989837,1990315-1990508,
1990601-1990717,1990801-1990966,1991323-1991490,
1991734-1993052
Length = 787
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/80 (31%), Positives = 37/80 (46%)
Frame = +2
Query: 230 GDTYDGYFEAKKKDRSVKMHGPGVYITAEGDSYKGVWENDRLGANDEVIIHFSDDARYEG 409
GD YDG++ +D G G YI G Y G W+ + VI ++D RY+G
Sbjct: 199 GDVYDGHWRDGLQD------GHGRYIWRGGHEYIGTWKAGEMHGRGTVI--WADGDRYDG 250
Query: 410 QLKDWSFWGPGKYYYPDGSV 469
+D G G + + DG +
Sbjct: 251 AWEDAKPKGQGTFRWSDGGM 270
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +2
Query: 281 KMHGPGVYITAEGDSYKGVWENDRLGANDEVIIHFSDDARYEGQ--LKDWSFWGPGKYYY 454
+MHG G I A+GD Y G WE+ + + +SD Y G + G G YY
Sbjct: 233 EMHGRGTVIWADGDRYDGAWEDAK--PKGQGTFRWSDGGMYIGLWCQESGETQGKGVYYP 290
Query: 455 PDG 463
P G
Sbjct: 291 PSG 293
Score = 37.5 bits (83), Expect = 0.010
Identities = 25/87 (28%), Positives = 34/87 (39%)
Frame = +2
Query: 287 HGPGVYITAEGDSYKGVWENDRLGANDEVIIHFSDDARYEGQLKDWSFWGPGKYYYPDGS 466
HG G Y+ +G Y+G W R + +S A YEG L G G Y G
Sbjct: 120 HGAGKYLWTDGSMYEGSWRGGRAAGRGK--FSWSSGAIYEGDLAGGYMHGQGTYIGELGD 177
Query: 467 VVRCDFNDNCPVGNMVLSDPNGHVWLG 547
+ +N G + NG V+ G
Sbjct: 178 TFAGLWANNLRHGRGTQAYVNGDVYDG 204
Score = 37.1 bits (82), Expect = 0.013
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 284 MHGPGVYITAEGDSYKGVWEND-RLGANDEVIIHFSDDARYEGQLKDWSFWGPGKYYYPD 460
MHG G YI GD++ G+W N+ R G + + + D Y+G +D G G+Y +
Sbjct: 165 MHGQGTYIGELGDTFAGLWANNLRHGRGTQAYV--NGDV-YDGHWRDGLQDGHGRYIWRG 221
Query: 461 G 463
G
Sbjct: 222 G 222
>11_01_0272 -
2042490-2042781,2043146-2043203,2043385-2043401,
2043572-2043765,2043858-2043974,2044059-2044224,
2044430-2044597,2044741-2046047
Length = 772
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/80 (31%), Positives = 37/80 (46%)
Frame = +2
Query: 230 GDTYDGYFEAKKKDRSVKMHGPGVYITAEGDSYKGVWENDRLGANDEVIIHFSDDARYEG 409
GD YDG++ +D G G YI G Y G W+ + VI ++D RY+G
Sbjct: 200 GDVYDGHWRDGLQD------GHGRYIWRGGHEYIGTWKAGEMHGRGTVI--WADGDRYDG 251
Query: 410 QLKDWSFWGPGKYYYPDGSV 469
+D G G + + DG +
Sbjct: 252 AWEDAKPKGQGTFRWSDGGM 271
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +2
Query: 281 KMHGPGVYITAEGDSYKGVWENDRLGANDEVIIHFSDDARYEGQ--LKDWSFWGPGKYYY 454
+MHG G I A+GD Y G WE+ + + +SD Y G + G G YY
Sbjct: 234 EMHGRGTVIWADGDRYDGAWEDAK--PKGQGTFRWSDGGMYIGLWCQESGETQGKGVYYP 291
Query: 455 PDG 463
P G
Sbjct: 292 PSG 294
Score = 37.5 bits (83), Expect = 0.010
Identities = 25/87 (28%), Positives = 34/87 (39%)
Frame = +2
Query: 287 HGPGVYITAEGDSYKGVWENDRLGANDEVIIHFSDDARYEGQLKDWSFWGPGKYYYPDGS 466
HG G Y+ +G Y+G W R + +S A YEG L G G Y G
Sbjct: 121 HGAGKYLWTDGSMYEGSWRGGRAAGRGK--FSWSSGAIYEGDLAGGYMHGQGTYIGELGD 178
Query: 467 VVRCDFNDNCPVGNMVLSDPNGHVWLG 547
+ +N G + NG V+ G
Sbjct: 179 TFAGLWANNLRHGRGTQAYVNGDVYDG 205
Score = 37.1 bits (82), Expect = 0.013
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 284 MHGPGVYITAEGDSYKGVWEND-RLGANDEVIIHFSDDARYEGQLKDWSFWGPGKYYYPD 460
MHG G YI GD++ G+W N+ R G + + + D Y+G +D G G+Y +
Sbjct: 166 MHGQGTYIGELGDTFAGLWANNLRHGRGTQAYV--NGDV-YDGHWRDGLQDGHGRYIWRG 222
Query: 461 G 463
G
Sbjct: 223 G 223
>09_04_0367 -
16978069-16978085,16978514-16978611,16979069-16979229,
16979320-16979548,16979731-16980593
Length = 455
Score = 37.1 bits (82), Expect = 0.013
Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Frame = +2
Query: 287 HGPGVYITAEGDSYKGVW---ENDRLGANDEVIIHFSDDARYEGQLKDWSFWGPGKYYYP 457
HG GVY GD Y G W ++ +GA SD + Y G+ K G G Y++
Sbjct: 234 HGHGVYRFYSGDCYAGEWAGGQSHGIGAQT-----CSDGSSYVGEFKCGVKHGLGSYHFR 288
Query: 458 DGSVVRCDFNDNCPVGNMVLSDPNGHVWLG 547
+G ++ + G V S NGH + G
Sbjct: 289 NGDRYAGEYFGDKIHGFGVYSFANGHCYEG 318
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +2
Query: 209 GLFKHDTGDTYDGYFEAKKKDRSVKMHGPGVYITAEGDSYKGVWENDR 352
G + GD Y G + K +HG GVY A G Y+G W +
Sbjct: 283 GSYHFRNGDRYAGEYFGDK------IHGFGVYSFANGHCYEGSWHEGK 324
>08_02_0965 + 23078568-23079430,23079527-23079755,23079854-23080018
Length = 418
Score = 36.7 bits (81), Expect = 0.017
Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Frame = +2
Query: 287 HGPGVYITAEGDSYKGVW---ENDRLGANDEVIIHFSDDARYEGQLKDWSFWGPGKYYYP 457
HG GVY GD Y G W ++ +GA SD + Y G+ K G G Y++
Sbjct: 234 HGHGVYRFYSGDCYAGEWAAGQSHGIGAQT-----CSDGSSYAGEFKGGVKHGLGCYHFR 288
Query: 458 DGSVVRCDFNDNCPVGNMVLSDPNGHVWLG 547
+G ++ + G V S NGH + G
Sbjct: 289 NGDRYSGEYFADRIHGFGVYSFANGHCYEG 318
Score = 31.1 bits (67), Expect = 0.84
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +2
Query: 209 GLFKHDTGDTYDGYFEAKKKDRSVKMHGPGVYITAEGDSYKGVWENDR 352
G + GD Y G + A DR +HG GVY A G Y+G W +
Sbjct: 283 GCYHFRNGDRYSGEYFA---DR---IHGFGVYSFANGHCYEGSWHEGK 324
>02_05_1265 -
35326506-35326773,35326944-35327109,35327194-35327351,
35327779-35327966,35328046-35328156,35328311-35328476,
35328718-35328885,35329374-35330623
Length = 824
Score = 33.1 bits (72), Expect = 0.21
Identities = 22/86 (25%), Positives = 36/86 (41%)
Frame = +2
Query: 290 GPGVYITAEGDSYKGVWENDRLGANDEVIIHFSDDARYEGQLKDWSFWGPGKYYYPDGSV 469
G G Y+ ++G +Y G W + + + A YEG+ +G G Y D V
Sbjct: 77 GSGRYVWSDGCTYDGEWRRGMRHGQGKTM--WPSGATYEGEYSGGYIYGEGTYTGSDNIV 134
Query: 470 VRCDFNDNCPVGNMVLSDPNGHVWLG 547
+ + N G + PNG ++ G
Sbjct: 135 YKGRWKLNRKHGLGCQTYPNGDMFDG 160
Score = 27.9 bits (59), Expect = 7.8
Identities = 24/108 (22%), Positives = 45/108 (41%), Gaps = 1/108 (0%)
Frame = +2
Query: 227 TGDTYDGYFEAKKKDRSVKMHGPGVYITAEGDSYKGVWE-NDRLGANDEVIIHFSDDARY 403
+G TY+G + ++G G Y ++ YKG W+ N + G + + + +
Sbjct: 108 SGATYEGEYSGGY------IYGEGTYTGSDNIVYKGRWKLNRKHGLGCQT---YPNGDMF 158
Query: 404 EGQLKDWSFWGPGKYYYPDGSVVRCDFNDNCPVGNMVLSDPNGHVWLG 547
+G G GKY + +G+ + + G L+ NG + G
Sbjct: 159 DGSWIQGEIEGHGKYTWANGNTYVGNMKNGKMSGKGTLTWKNGDSYEG 206
>02_05_1025 + 33588053-33589998,33590357-33590630,33591031-33591354
Length = 847
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Frame = +2
Query: 455 PDGSVVRCDFNDNCPVGNMVLSDPNGHVWL----GKAELGCGWFGP 580
P+GS+ + N+ V N + DP V++ GK ELG WF P
Sbjct: 590 PEGSIDKAPSNEVISVLNRLCEDPKNRVFIVSGRGKDELG-RWFAP 634
>05_01_0084 +
562119-562411,562854-562902,563151-563162,563194-563327,
563716-566278
Length = 1016
Score = 27.9 bits (59), Expect = 7.8
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = -3
Query: 614 VFSPTSHKNDSLARTIHSLAPLSQARHVRLDHLIPYSQLDSCR*NHNEQHFHPDS-NTFQ 438
+ PTS N A T+ P SQ + + + P SQL S N N++ P S F
Sbjct: 280 MMQPTSQLNIMNANTMQ---PTSQLNTMNANTMQPTSQLSSLNPNQNQRFAAPASGGVFG 336
Query: 437 DPRNS 423
P N+
Sbjct: 337 PPGNA 341
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,224,360
Number of Sequences: 37544
Number of extensions: 402151
Number of successful extensions: 972
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1703141568
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -