Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30m18
(711 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 26 1.0
M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein. 26 1.3
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 24 4.1
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript... 24 5.4
AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein p... 24 5.4
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 23 7.2
AY028783-1|AAK32957.1| 499|Anopheles gambiae cytochrome P450 pr... 23 9.5
AF387862-1|AAL56547.1| 476|Anopheles gambiae gag polyprotein pr... 23 9.5
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 26.2 bits (55), Expect = 1.0
Identities = 25/98 (25%), Positives = 39/98 (39%)
Frame = +3
Query: 372 QQTDKEQTENLVSMMRSYDAKLYGEDDTSQPTSRAAPVIPVDAMRKKKKRKRSQITICLA 551
++ D+ +TE + + + SQPT A P P +A R + R+R +
Sbjct: 1101 REEDERRTEERRQLHNEANRAYRQRNRRSQPTPPAPPPTPREAARLEDGRRR----VARW 1156
Query: 552 NCRYESIRKVASAFGMREVSEEDAWNFYWTDMSVSVER 665
R IR +R + DAW+ D VER
Sbjct: 1157 RERQRMIRNGGIQM-LRALFGHDAWSSESDDEPDDVER 1193
Score = 25.4 bits (53), Expect = 1.8
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -1
Query: 693 CAETFSFPSPFRQTHSYQSNRNSKRLLRKPPSYRTHWRPF-LLTHIGNLQDKLL 535
C ET +FP+P+++ + KPP +RP +L +G + +KL+
Sbjct: 526 CLETATFPAPWKRQRLVLLPKPG-----KPPGSNGSYRPLCMLDALGKVLEKLI 574
Score = 23.4 bits (48), Expect = 7.2
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1
Query: 645 YQSNRNSKRLLRKPPSYR 592
Y RN+ R +R PP YR
Sbjct: 30 YMHGRNTLRQMRWPPCYR 47
>M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein.
Length = 613
Score = 25.8 bits (54), Expect = 1.3
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = +3
Query: 294 EQQKQTISSQNKPKKIKTRDEKISGDQQTDKEQTENLVSMMR 419
+QQ+Q + QN+ + + + ++ QQ +EQ E +++R
Sbjct: 274 QQQQQRVQQQNQQHQRQQQQQQQQRQQQQQQEQQELWTTVVR 315
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 24.2 bits (50), Expect = 4.1
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -1
Query: 633 RNSKRLLRKPPSYRTHWR 580
+ + RLL+KPPS + W+
Sbjct: 154 KTTVRLLKKPPSLDSEWK 171
>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
protein.
Length = 1209
Score = 23.8 bits (49), Expect = 5.4
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 249 FLRDIIISLGIAECKSLILH 190
F DI + GI +C+S+ LH
Sbjct: 737 FSNDIKMEFGIGKCRSIHLH 756
>AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein
protein.
Length = 541
Score = 23.8 bits (49), Expect = 5.4
Identities = 12/78 (15%), Positives = 35/78 (44%)
Frame = +3
Query: 300 QKQTISSQNKPKKIKTRDEKISGDQQTDKEQTENLVSMMRSYDAKLYGEDDTSQPTSRAA 479
Q++ ++ + +K+K + EK++ Q D+ +L++ + P R +
Sbjct: 129 QEEKEEAKRREEKLKAQMEKLAAAHQRDRNLLNSLLAAKVAGGQPSASSRQPPTPLPRRS 188
Query: 480 PVIPVDAMRKKKKRKRSQ 533
P +++++ ++ Q
Sbjct: 189 SAQPQQQQQQQQRNQQEQ 206
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 23.4 bits (48), Expect = 7.2
Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +3
Query: 495 DAMRKKKKRKRSQITICLANCRYESIRKVASAFGMREVSEEDAWNFYWTDMSVS-VERAK 671
+ + K ++ ++T YE++ +AS + EED+ NF + S E AK
Sbjct: 841 NTVNKVHRKLAMRVTSAYRTISYEAVCVIASMMPLCITLEEDSKNFRKSRAGESFTETAK 900
Query: 672 EMKR 683
+ R
Sbjct: 901 KASR 904
>AY028783-1|AAK32957.1| 499|Anopheles gambiae cytochrome P450
protein.
Length = 499
Score = 23.0 bits (47), Expect = 9.5
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -3
Query: 601 LIPNALATFLIDSYRQFARQI 539
L+P+ FL+ SYR AR++
Sbjct: 211 LLPSVWKLFLMTSYRSVARKL 231
>AF387862-1|AAL56547.1| 476|Anopheles gambiae gag polyprotein
protein.
Length = 476
Score = 23.0 bits (47), Expect = 9.5
Identities = 16/70 (22%), Positives = 33/70 (47%)
Frame = +3
Query: 468 SRAAPVIPVDAMRKKKKRKRSQITICLANCRYESIRKVASAFGMREVSEEDAWNFYWTDM 647
S AAP + ++ + R+ I + + +C++ IR +A G + ++ + T M
Sbjct: 37 STAAPESLTETWKEGDAKARATIALLVDDCQHPLIRDCKTAKGTWDALQK---HHQKTTM 93
Query: 648 SVSVERAKEM 677
S V K++
Sbjct: 94 STKVSLLKKL 103
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 680,190
Number of Sequences: 2352
Number of extensions: 13189
Number of successful extensions: 27
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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