Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30m18
(711 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL031630-14|CAA20993.1| 185|Caenorhabditis elegans Hypothetical... 37 0.012
Z81543-4|CAB04426.2| 125|Caenorhabditis elegans Hypothetical pr... 32 0.35
U41013-2|AAA82300.1| 557|Caenorhabditis elegans Hypothetical pr... 32 0.47
AF045641-4|AAO91715.1| 332|Caenorhabditis elegans Hypothetical ... 31 0.61
AF045641-3|AAO91716.1| 368|Caenorhabditis elegans Hypothetical ... 31 0.61
AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical ... 31 0.61
Z78417-10|CAB01688.2| 745|Caenorhabditis elegans Hypothetical p... 31 1.1
Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p... 30 1.9
Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr... 30 1.9
U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos... 30 1.9
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 29 3.3
L23646-3|AAK67236.1| 1283|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 29 4.3
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 29 4.3
AF039041-8|AAB94189.2| 448|Caenorhabditis elegans Hypothetical ... 29 4.3
U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical pr... 28 5.7
AL022288-2|CAA18370.1| 338|Caenorhabditis elegans Hypothetical ... 28 5.7
AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical... 28 5.7
AL110487-1|CAB54424.1| 610|Caenorhabditis elegans Hypothetical ... 28 7.6
>AL031630-14|CAA20993.1| 185|Caenorhabditis elegans Hypothetical
protein Y38H6C.15 protein.
Length = 185
Score = 37.1 bits (82), Expect = 0.012
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +3
Query: 276 SRDENLEQQKQTISSQNKPKK-IKTRDEKISGDQQTDKEQTENLVSMMRSYDAKLYGEDD 452
S+ + ++K T+SS++KP+K K +E+ +++ KE+T + S +R D D
Sbjct: 92 SKKSDKTKKKTTVSSEDKPEKPEKLTEEEKPKEKEKAKEKTVPVQSKLREGDKNAVVTDP 151
Query: 453 TSQPTSRAAPVIPVDAMRKKKKR 521
P + P + D +K +K+
Sbjct: 152 IVTPETDEYPTLEEDGDKKTEKK 174
>Z81543-4|CAB04426.2| 125|Caenorhabditis elegans Hypothetical
protein F49B2.4 protein.
Length = 125
Score = 32.3 bits (70), Expect = 0.35
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = +3
Query: 303 KQTISSQNKPKKIKTRDEKI--SGDQQTDKEQTENLVSMMRS-YDAKLYGEDDTSQPTSR 473
K T + KK + R +K+ G E+TE + +RS A +Y + + + T
Sbjct: 46 KATEGAVGSSKKGENRHDKLLAPGVPLAQDERTEK--NQLRSGKSAPIYVQVNKKKATKL 103
Query: 474 AAPVIPVDAMRKKKKRKRSQITI 542
A PV PV RKKKK+ RS++ +
Sbjct: 104 AQPV-PVAQDRKKKKKPRSELNM 125
>U41013-2|AAA82300.1| 557|Caenorhabditis elegans Hypothetical
protein T06C10.3 protein.
Length = 557
Score = 31.9 bits (69), Expect = 0.47
Identities = 27/113 (23%), Positives = 53/113 (46%)
Frame = +3
Query: 297 QQKQTISSQNKPKKIKTRDEKISGDQQTDKEQTENLVSMMRSYDAKLYGEDDTSQPTSRA 476
Q +++ + P K + EK D++ +E+ E S+ + K+ + +++Q T +
Sbjct: 37 QSAPAMNAASSPSKEPAKQEK-EDDKKEVEEKKEIEKSVEAKVEGKVKAKVESTQNTDNS 95
Query: 477 APVIPVDAMRKKKKRKRSQITICLANCRYESIRKVASAFGMREVSEEDAWNFY 635
+ + KKKK+K+S + I A+ SI F + E + +NFY
Sbjct: 96 QELKAPEEKPKKKKKKKSNL-IVSASVEKLSIVPEKEDFSILEKKLRE-FNFY 146
>AF045641-4|AAO91715.1| 332|Caenorhabditis elegans Hypothetical
protein F53H1.4b protein.
Length = 332
Score = 31.5 bits (68), Expect = 0.61
Identities = 17/74 (22%), Positives = 36/74 (48%)
Frame = +3
Query: 294 EQQKQTISSQNKPKKIKTRDEKISGDQQTDKEQTENLVSMMRSYDAKLYGEDDTSQPTSR 473
+++K+ + K KK+K ++EK+ ++ + E + D L + DT P+S+
Sbjct: 222 QEEKKQKKEEEKAKKLKEKEEKLKEKEEKAARKAEKKEKNNGTMDKFL--KKDTGSPSSK 279
Query: 474 AAPVIPVDAMRKKK 515
AP+ +K+
Sbjct: 280 NAPLFSPSKWGEKR 293
>AF045641-3|AAO91716.1| 368|Caenorhabditis elegans Hypothetical
protein F53H1.4c protein.
Length = 368
Score = 31.5 bits (68), Expect = 0.61
Identities = 17/74 (22%), Positives = 36/74 (48%)
Frame = +3
Query: 294 EQQKQTISSQNKPKKIKTRDEKISGDQQTDKEQTENLVSMMRSYDAKLYGEDDTSQPTSR 473
+++K+ + K KK+K ++EK+ ++ + E + D L + DT P+S+
Sbjct: 258 QEEKKQKKEEEKAKKLKEKEEKLKEKEEKAARKAEKKEKNNGTMDKFL--KKDTGSPSSK 315
Query: 474 AAPVIPVDAMRKKK 515
AP+ +K+
Sbjct: 316 NAPLFSPSKWGEKR 329
>AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical
protein F53H1.4a protein.
Length = 1370
Score = 31.5 bits (68), Expect = 0.61
Identities = 17/74 (22%), Positives = 36/74 (48%)
Frame = +3
Query: 294 EQQKQTISSQNKPKKIKTRDEKISGDQQTDKEQTENLVSMMRSYDAKLYGEDDTSQPTSR 473
+++K+ + K KK+K ++EK+ ++ + E + D L + DT P+S+
Sbjct: 258 QEEKKQKKEEEKAKKLKEKEEKLKEKEEKAARKAEKKEKNNGTMDKFL--KKDTGSPSSK 315
Query: 474 AAPVIPVDAMRKKK 515
AP+ +K+
Sbjct: 316 NAPLFSPSKWGEKR 329
>Z78417-10|CAB01688.2| 745|Caenorhabditis elegans Hypothetical
protein C35C5.2 protein.
Length = 745
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +3
Query: 288 NLEQQKQTISSQNKPKKIKTRDEKISGDQQTDKEQTENLVSMMRSYDAKLYGEDDTSQPT 467
N ++ + T+ ++N+ +KI+ I G Q+ DK V + YDA YG D + T
Sbjct: 322 NNQKLRVTVHAENEERKIQNIMGYIKGSQEPDK-----FVLVSNHYDAWTYGAVDPNSGT 376
Query: 468 S 470
S
Sbjct: 377 S 377
>Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical
protein F20G4.3 protein.
Length = 2003
Score = 29.9 bits (64), Expect = 1.9
Identities = 23/93 (24%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Frame = +3
Query: 267 DLFSR-DENLEQQKQTISSQNKPKKIKTRDEKISGDQQTDKEQTENLVSMMRSYDAKLYG 443
DL SR + +E+ KQ + ++ +++ +I+ + + +K+Q N + R+ + +L
Sbjct: 1020 DLSSRLIDEVERSKQLVKAK---ARLEATVAEINDELEKEKQQRHNAETARRAAETQLRE 1076
Query: 444 EDDTSQPTSRAAPVIPVDAMRKKKKRKRSQITI 542
E ++ +R A + MRK+ + SQI+I
Sbjct: 1077 EQESCLEKTRKAEELTNQLMRKES--ELSQISI 1107
>Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical protein
F20G4.3 protein.
Length = 2003
Score = 29.9 bits (64), Expect = 1.9
Identities = 23/93 (24%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Frame = +3
Query: 267 DLFSR-DENLEQQKQTISSQNKPKKIKTRDEKISGDQQTDKEQTENLVSMMRSYDAKLYG 443
DL SR + +E+ KQ + ++ +++ +I+ + + +K+Q N + R+ + +L
Sbjct: 1020 DLSSRLIDEVERSKQLVKAK---ARLEATVAEINDELEKEKQQRHNAETARRAAETQLRE 1076
Query: 444 EDDTSQPTSRAAPVIPVDAMRKKKKRKRSQITI 542
E ++ +R A + MRK+ + SQI+I
Sbjct: 1077 EQESCLEKTRKAEELTNQLMRKES--ELSQISI 1107
>U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin
heavy chain II protein.
Length = 2003
Score = 29.9 bits (64), Expect = 1.9
Identities = 23/93 (24%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Frame = +3
Query: 267 DLFSR-DENLEQQKQTISSQNKPKKIKTRDEKISGDQQTDKEQTENLVSMMRSYDAKLYG 443
DL SR + +E+ KQ + ++ +++ +I+ + + +K+Q N + R+ + +L
Sbjct: 1020 DLSSRLIDEVERSKQLVKAK---ARLEATVAEINDELEKEKQQRHNAETARRAAETQLRE 1076
Query: 444 EDDTSQPTSRAAPVIPVDAMRKKKKRKRSQITI 542
E ++ +R A + MRK+ + SQI+I
Sbjct: 1077 EQESCLEKTRKAEELTNQLMRKES--ELSQISI 1107
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 285 ENLEQQKQTISSQNKPKKIKTRDEKISGDQQTDKE 389
E + + I + KPK+++ D+K S +Q++KE
Sbjct: 602 EEEKDDGEVIEEEEKPKEVEAEDKKKSSKKQSEKE 636
>L23646-3|AAK67236.1| 1283|Caenorhabditis elegans Hypothetical protein
F44E2.4 protein.
Length = 1283
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +2
Query: 458 SAHVTSCTCYSGRRNAQKKEKEKITNNNLSCKLPI*VNKKGRQCVR 595
S V+SC +GR Q + K ++NLSC K QC+R
Sbjct: 883 SCVVSSCMVEAGRGICQLSDPAKAIDDNLSCLFGQAQEPKFAQCIR 928
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical
protein T10G3.5b protein.
Length = 1203
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/53 (24%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +3
Query: 276 SRDENLEQQKQTISSQNK-PKKIKTRDEKISGDQQTDKEQTENLVSMMRSYDA 431
+++ L + K ++ N +++K + EK+S + +++ ENL++ MR +A
Sbjct: 678 TKESELSELKGKLTESNSFIEELKVQVEKVSNEISEKQQEVENLMAEMRDKEA 730
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical
protein T10G3.5a protein.
Length = 1205
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/53 (24%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +3
Query: 276 SRDENLEQQKQTISSQNK-PKKIKTRDEKISGDQQTDKEQTENLVSMMRSYDA 431
+++ L + K ++ N +++K + EK+S + +++ ENL++ MR +A
Sbjct: 680 TKESELSELKGKLTESNSFIEELKVQVEKVSNEISEKQQEVENLMAEMRDKEA 732
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/53 (24%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +3
Query: 276 SRDENLEQQKQTISSQNK-PKKIKTRDEKISGDQQTDKEQTENLVSMMRSYDA 431
+++ L + K ++ N +++K + EK+S + +++ ENL++ MR +A
Sbjct: 680 TKESELSELKGKLTESNSFIEELKVQVEKVSNEISEKQQEVENLMAEMRDKEA 732
>AF039041-8|AAB94189.2| 448|Caenorhabditis elegans Hypothetical
protein W03F8.2 protein.
Length = 448
Score = 28.7 bits (61), Expect = 4.3
Identities = 26/97 (26%), Positives = 46/97 (47%)
Frame = +3
Query: 345 TRDEKISGDQQTDKEQTENLVSMMRSYDAKLYGEDDTSQPTSRAAPVIPVDAMRKKKKRK 524
T+ EK D++ +E+ EN + + K+ + + +Q T + + + KKKK+K
Sbjct: 88 TKQEK-EDDKKEVEEKKENEKPVDVKVEEKVMVKVEATQNTDNSQELKAPEEKPKKKKKK 146
Query: 525 RSQITICLANCRYESIRKVASAFGMREVSEEDAWNFY 635
+S I I A+ SI F + E + +NFY
Sbjct: 147 KSNI-IATASVEKISIVPEKEDFSILEKKLRE-FNFY 181
>U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical
protein ZK354.3 protein.
Length = 312
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/52 (23%), Positives = 29/52 (55%)
Frame = +3
Query: 279 RDENLEQQKQTISSQNKPKKIKTRDEKISGDQQTDKEQTENLVSMMRSYDAK 434
+DE +++K+ + K +K + + E+ +++ DK++ + S +S D K
Sbjct: 238 KDEKKDEKKEAKKEEKKEEKKEEKKEEKKEEKKDDKKEDDKEKSATKSEDKK 289
>AL022288-2|CAA18370.1| 338|Caenorhabditis elegans Hypothetical
protein ZK1025.3 protein.
Length = 338
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = -1
Query: 300 VVQDSHLVRISPEFPPPFLRDIIISLGIAECKSLIL 193
V++D + + + PF+R +I++G EC++ +L
Sbjct: 302 VLEDRRYIMLRSYYADPFIRTFMINVGDEECRNPLL 337
>AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical
protein F36H12.3 protein.
Length = 335
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/87 (19%), Positives = 39/87 (44%)
Frame = +3
Query: 282 DENLEQQKQTISSQNKPKKIKTRDEKISGDQQTDKEQTENLVSMMRSYDAKLYGEDDTSQ 461
DE E++K + + KK + ++EK ++ KE+ + + + E +
Sbjct: 163 DEKKEEKKDDKEEKKEEKKEEKKEEKKEEKKEEKKEEEKKEEKKEEKKEDEKKVEPKPGE 222
Query: 462 PTSRAAPVIPVDAMRKKKKRKRSQITI 542
P + P D M K ++++ ++T+
Sbjct: 223 PKPHISIEPPGDLMFKADQQEQKKLTL 249
>AL110487-1|CAB54424.1| 610|Caenorhabditis elegans Hypothetical
protein Y39E4B.1 protein.
Length = 610
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 509 KKEKEKITNNNLSCKLPI*VNKKGRQCV 592
+K++ K N L+CK VN++G+QC+
Sbjct: 23 EKDRCKPKNCGLACKRACPVNRQGKQCI 50
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,401,195
Number of Sequences: 27780
Number of extensions: 318084
Number of successful extensions: 1555
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1550
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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