Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30m18
         (711 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    30   0.025
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    23   2.9  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    23   2.9  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    23   2.9  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   3.8  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   3.8  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          23   3.8  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    22   6.6  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   8.7  

>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 29.9 bits (64), Expect = 0.025
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = -1

Query: 702 NDLCAETFSFPSPFRQTHSYQSNRNSKRLLRKPPSYRTHWRPFLLTHIGNLQDKLLFVI 526
           + + A TF FPS   +     SN N   LLR  P++   W   L TH+  +++++  ++
Sbjct: 3   DQMMAATFDFPSLSFEDSDEGSNWNWNTLLR--PNFLDGWYQTLQTHMKKVREQMAGIL 59


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -1

Query: 702 NDLCAETFSFPSPFRQTHSYQSNRNSKRLLRKPPSYRTHW 583
           + + A TF FPS   +     SN N   LLR  P++   W
Sbjct: 47  DQMMAATFDFPSLSFEDSDEGSNWNWNTLLR--PNFLDGW 84


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -1

Query: 702 NDLCAETFSFPSPFRQTHSYQSNRNSKRLLRKPPSYRTHW 583
           + + A TF FPS   +     SN N   LLR  P++   W
Sbjct: 47  DQMMAATFDFPSLSFEDSDEGSNWNWNTLLR--PNFLDGW 84


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -1

Query: 702 NDLCAETFSFPSPFRQTHSYQSNRNSKRLLRKPPSYRTHW 583
           + + A TF FPS   +     SN N   LLR  P++   W
Sbjct: 47  DQMMAATFDFPSLSFEDSDEGSNWNWNTLLR--PNFLDGW 84


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = -1

Query: 675 FPSPFRQTHSYQSNRNSKRLLRKPPSYRTHWRPFLLTHIGNLQDK 541
           F S      S QS+  +K  + K   YR + +PF   HI    DK
Sbjct: 465 FESMLNNGVSIQSHAKAKNTMIKARQYRLNHKPFTY-HIVVNSDK 508


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = -1

Query: 675 FPSPFRQTHSYQSNRNSKRLLRKPPSYRTHWRPFLLTHIGNLQDK 541
           F S      S QS+  +K  + K   YR + +PF   HI    DK
Sbjct: 465 FESMLNNGVSIQSHAKAKNTMIKARQYRLNHKPFTY-HIVVNSDK 508


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = -1

Query: 675 FPSPFRQTHSYQSNRNSKRLLRKPPSYRTHWRPFLLTHIGNLQDK 541
           F S      S QS+  +K  + K   YR + +PF   HI    DK
Sbjct: 91  FESMLNNGVSIQSHAKAKNTMIKARQYRLNHKPFTY-HIVVNSDK 134


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +1

Query: 277 HEMRILNNKNKLYHRKT 327
           HEM I N+   LYH KT
Sbjct: 103 HEMSIPNHYLWLYHDKT 119


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 230 IIISLRNGGGNSGL 271
           I++   NGGG  GL
Sbjct: 39  IVVGANNGGGGGGL 52


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,988
Number of Sequences: 438
Number of extensions: 3924
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)