Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30m14
(764 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69792-4|CAA93665.1| 212|Caenorhabditis elegans Hypothetical pr... 114 7e-26
U38377-1|AAA79747.2| 283|Caenorhabditis elegans Sox (mammalian ... 111 7e-25
U80032-3|AAM15556.1| 404|Caenorhabditis elegans Sox (mammalian ... 109 3e-24
U64608-9|AAX88815.1| 319|Caenorhabditis elegans Egg laying defe... 95 4e-20
U64608-8|AAO91671.1| 316|Caenorhabditis elegans Egg laying defe... 95 4e-20
U64608-7|AAX88814.1| 422|Caenorhabditis elegans Egg laying defe... 95 4e-20
U64608-6|AAB04597.2| 470|Caenorhabditis elegans Egg laying defe... 95 4e-20
AF097319-1|AAD12252.1| 470|Caenorhabditis elegans Sox domain pr... 95 4e-20
U51998-8|AAA96081.2| 241|Caenorhabditis elegans Hypothetical pr... 84 1e-16
U38377-2|AAN72421.1| 199|Caenorhabditis elegans Sox (mammalian ... 78 6e-15
Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical pr... 73 2e-13
Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical p... 73 2e-13
Z50797-9|CAL36516.1| 640|Caenorhabditis elegans Hypothetical pr... 73 2e-13
AF043703-1|AAK21504.1| 437|Caenorhabditis elegans Posterior pha... 63 2e-10
U37532-1|AAC05308.1| 438|Caenorhabditis elegans HMG-box protein... 62 6e-10
Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical p... 44 1e-04
Z72503-5|CAI79155.1| 513|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U22831-3|AAK67237.1| 234|Caenorhabditis elegans Hmg protein 1.2... 41 8e-04
U22831-2|AAK67238.1| 233|Caenorhabditis elegans Hmg protein 1.2... 41 8e-04
U22831-1|AAK20071.1| 235|Caenorhabditis elegans Hmg protein 1.2... 41 8e-04
AF056577-1|AAC78599.1| 235|Caenorhabditis elegans high mobility... 41 8e-04
Z81137-2|CAB03465.1| 386|Caenorhabditis elegans Hypothetical pr... 38 0.006
AC024859-13|AAK29965.2| 338|Caenorhabditis elegans Hypothetical... 38 0.008
AF000195-3|AAC24268.1| 689|Caenorhabditis elegans Hmg protein 3... 34 0.096
S47168-2|AAB23866.2| 919|Caenorhabditis elegans UNC-5 protein. 33 0.22
S47168-1|AAB23867.2| 947|Caenorhabditis elegans UNC-5 protein. 33 0.22
AF036698-5|AAB88356.2| 567|Caenorhabditis elegans Uncoordinated... 33 0.22
AF036698-4|AAB88355.1| 919|Caenorhabditis elegans Uncoordinated... 33 0.22
Z73102-17|CAA97418.2| 375|Caenorhabditis elegans Hypothetical p... 30 1.6
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein. 29 2.7
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso... 29 2.7
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 29 2.7
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 29 2.7
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 29 2.7
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein. 29 2.7
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 29 3.6
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 29 3.6
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 29 3.6
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 29 3.6
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 29 3.6
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 29 4.8
AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical ... 29 4.8
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 29 4.8
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 29 4.8
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 29 4.8
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 29 4.8
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 29 4.8
Z30423-12|CAA83006.2| 486|Caenorhabditis elegans Hypothetical p... 28 6.3
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr... 28 6.3
AL022593-1|CAA18634.1| 129|Caenorhabditis elegans Hypothetical ... 28 6.3
AF040652-7|AAB95017.1| 210|Caenorhabditis elegans Hypothetical ... 28 6.3
AF031935-1|AAB87066.1| 486|Caenorhabditis elegans UNC-47 protein. 28 6.3
AC024751-6|AAK21506.1| 270|Caenorhabditis elegans Hypothetical ... 28 6.3
Z75711-6|CAB00037.3| 387|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z73899-9|CAA98072.2| 905|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z11576-1|CAA77663.1| 625|Caenorhabditis elegans aromatic-L-amin... 28 8.4
U97592-1|AAB52871.3| 638|Caenorhabditis elegans Temporarily ass... 28 8.4
>Z69792-4|CAA93665.1| 212|Caenorhabditis elegans Hypothetical
protein F40E10.2 protein.
Length = 212
Score = 114 bits (274), Expect = 7e-26
Identities = 48/88 (54%), Positives = 65/88 (73%)
Frame = +3
Query: 276 HVKRPMNAFMVFAQAMRRRLSAERPSLHNAELSKSLGSMWKNLSEEEKLPFIKEADKLRT 455
HVKRPMNAFMV+++ RR+++ + P +HN+E+SK LG+ WK LSE+EK PFI EA +LR
Sbjct: 47 HVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKQLSEQEKRPFIDEAKRLRA 106
Query: 456 QHKKQHPDYKYQPRRRKPPLASASTPRV 539
H K+HPDYKY+PRR+ PR+
Sbjct: 107 LHMKEHPDYKYRPRRKPKSSNLKQQPRL 134
>U38377-1|AAA79747.2| 283|Caenorhabditis elegans Sox (mammalian sry
box) familyprotein 2, isoform a protein.
Length = 283
Score = 111 bits (266), Expect = 7e-25
Identities = 48/89 (53%), Positives = 64/89 (71%)
Frame = +3
Query: 237 PQPTKGGGCMRRPHVKRPMNAFMVFAQAMRRRLSAERPSLHNAELSKSLGSMWKNLSEEE 416
P T G VKRPMNAFMV+++ R++++ E P +HN+E+SK LG+ WK LSE+E
Sbjct: 46 PDSTGKDGKKNDDRVKRPMNAFMVWSRGQRKKMALENPKMHNSEISKRLGTEWKMLSEQE 105
Query: 417 KLPFIKEADKLRTQHKKQHPDYKYQPRRR 503
K PFI EA +LR H K+HPDYKY+PRR+
Sbjct: 106 KRPFIDEAKRLRAIHMKEHPDYKYRPRRK 134
>U80032-3|AAM15556.1| 404|Caenorhabditis elegans Sox (mammalian sry
box) familyprotein 1 protein.
Length = 404
Score = 109 bits (261), Expect = 3e-24
Identities = 42/76 (55%), Positives = 63/76 (82%)
Frame = +3
Query: 276 HVKRPMNAFMVFAQAMRRRLSAERPSLHNAELSKSLGSMWKNLSEEEKLPFIKEADKLRT 455
H+KRPMNAFMV++Q RR++ +P +HNAE+SK LGS W++L++EEK PF+ EA++LR
Sbjct: 92 HIKRPMNAFMVWSQMERRKICEHQPDMHNAEISKQLGSRWRSLTDEEKAPFVAEAERLRV 151
Query: 456 QHKKQHPDYKYQPRRR 503
H +++PDYKY+PR++
Sbjct: 152 CHMQEYPDYKYKPRKK 167
>U64608-9|AAX88815.1| 319|Caenorhabditis elegans Egg laying
defective protein 13,isoform d protein.
Length = 319
Score = 95.5 bits (227), Expect = 4e-20
Identities = 40/88 (45%), Positives = 58/88 (65%)
Frame = +3
Query: 276 HVKRPMNAFMVFAQAMRRRLSAERPSLHNAELSKSLGSMWKNLSEEEKLPFIKEADKLRT 455
H+KRPMNAFMV+A+ RR++ P +HN+ +SK LGS WK +S EK P+ +E +L
Sbjct: 177 HIKRPMNAFMVWARDERRKILKAYPDMHNSNISKILGSRWKGMSNSEKQPYYEEQSRLSK 236
Query: 456 QHKKQHPDYKYQPRRRKPPLASASTPRV 539
H +QHPDY+Y+PR ++ + RV
Sbjct: 237 LHMEQHPDYRYRPRPKRTCVIDGKKVRV 264
>U64608-8|AAO91671.1| 316|Caenorhabditis elegans Egg laying
defective protein 13,isoform b protein.
Length = 316
Score = 95.5 bits (227), Expect = 4e-20
Identities = 40/88 (45%), Positives = 58/88 (65%)
Frame = +3
Query: 276 HVKRPMNAFMVFAQAMRRRLSAERPSLHNAELSKSLGSMWKNLSEEEKLPFIKEADKLRT 455
H+KRPMNAFMV+A+ RR++ P +HN+ +SK LGS WK +S EK P+ +E +L
Sbjct: 174 HIKRPMNAFMVWARDERRKILKAYPDMHNSNISKILGSRWKGMSNSEKQPYYEEQSRLSK 233
Query: 456 QHKKQHPDYKYQPRRRKPPLASASTPRV 539
H +QHPDY+Y+PR ++ + RV
Sbjct: 234 LHMEQHPDYRYRPRPKRTCVIDGKKVRV 261
>U64608-7|AAX88814.1| 422|Caenorhabditis elegans Egg laying
defective protein 13,isoform c protein.
Length = 422
Score = 95.5 bits (227), Expect = 4e-20
Identities = 40/88 (45%), Positives = 58/88 (65%)
Frame = +3
Query: 276 HVKRPMNAFMVFAQAMRRRLSAERPSLHNAELSKSLGSMWKNLSEEEKLPFIKEADKLRT 455
H+KRPMNAFMV+A+ RR++ P +HN+ +SK LGS WK +S EK P+ +E +L
Sbjct: 280 HIKRPMNAFMVWARDERRKILKAYPDMHNSNISKILGSRWKGMSNSEKQPYYEEQSRLSK 339
Query: 456 QHKKQHPDYKYQPRRRKPPLASASTPRV 539
H +QHPDY+Y+PR ++ + RV
Sbjct: 340 LHMEQHPDYRYRPRPKRTCVIDGKKVRV 367
>U64608-6|AAB04597.2| 470|Caenorhabditis elegans Egg laying
defective protein 13,isoform a protein.
Length = 470
Score = 95.5 bits (227), Expect = 4e-20
Identities = 40/88 (45%), Positives = 58/88 (65%)
Frame = +3
Query: 276 HVKRPMNAFMVFAQAMRRRLSAERPSLHNAELSKSLGSMWKNLSEEEKLPFIKEADKLRT 455
H+KRPMNAFMV+A+ RR++ P +HN+ +SK LGS WK +S EK P+ +E +L
Sbjct: 328 HIKRPMNAFMVWARDERRKILKAYPDMHNSNISKILGSRWKGMSNSEKQPYYEEQSRLSK 387
Query: 456 QHKKQHPDYKYQPRRRKPPLASASTPRV 539
H +QHPDY+Y+PR ++ + RV
Sbjct: 388 LHMEQHPDYRYRPRPKRTCVIDGKKVRV 415
>AF097319-1|AAD12252.1| 470|Caenorhabditis elegans Sox domain
protein COG-2 protein.
Length = 470
Score = 95.5 bits (227), Expect = 4e-20
Identities = 40/88 (45%), Positives = 58/88 (65%)
Frame = +3
Query: 276 HVKRPMNAFMVFAQAMRRRLSAERPSLHNAELSKSLGSMWKNLSEEEKLPFIKEADKLRT 455
H+KRPMNAFMV+A+ RR++ P +HN+ +SK LGS WK +S EK P+ +E +L
Sbjct: 328 HIKRPMNAFMVWARDERRKILKAYPDMHNSNISKILGSRWKGMSNSEKQPYYEEQSRLSK 387
Query: 456 QHKKQHPDYKYQPRRRKPPLASASTPRV 539
H +QHPDY+Y+PR ++ + RV
Sbjct: 388 LHMEQHPDYRYRPRPKRTCVIDGKKVRV 415
>U51998-8|AAA96081.2| 241|Caenorhabditis elegans Hypothetical
protein C12D12.5 protein.
Length = 241
Score = 83.8 bits (198), Expect = 1e-16
Identities = 42/105 (40%), Positives = 62/105 (59%), Gaps = 17/105 (16%)
Frame = +3
Query: 267 RRPHVKRPMNAFMV-----------------FAQAMRRRLSAERPSLHNAELSKSLGSMW 395
R P +KRPMNAFMV ++Q R++++A HN+++SK LG+ W
Sbjct: 81 REPRIKRPMNAFMVINVQTWKIRKSNDYIKVWSQQRRQQIAATGQKFHNSDISKMLGAEW 140
Query: 396 KNLSEEEKLPFIKEADKLRTQHKKQHPDYKYQPRRRKPPLASAST 530
+ + E EK+PF++ A +LR +H HPDY Y+PRRRK SA +
Sbjct: 141 RKMEEHEKVPFVERAKQLREEHFNAHPDYVYRPRRRKRVEKSAGS 185
>U38377-2|AAN72421.1| 199|Caenorhabditis elegans Sox (mammalian sry
box) familyprotein 2, isoform b protein.
Length = 199
Score = 78.2 bits (184), Expect = 6e-15
Identities = 32/50 (64%), Positives = 41/50 (82%)
Frame = +3
Query: 354 LHNAELSKSLGSMWKNLSEEEKLPFIKEADKLRTQHKKQHPDYKYQPRRR 503
+HN+E+SK LG+ WK LSE+EK PFI EA +LR H K+HPDYKY+PRR+
Sbjct: 1 MHNSEISKRLGTEWKMLSEQEKRPFIDEAKRLRAIHMKEHPDYKYRPRRK 50
>Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical protein
T22H6.6a protein.
Length = 1405
Score = 72.9 bits (171), Expect = 2e-13
Identities = 33/89 (37%), Positives = 54/89 (60%)
Frame = +3
Query: 273 PHVKRPMNAFMVFAQAMRRRLSAERPSLHNAELSKSLGSMWKNLSEEEKLPFIKEADKLR 452
PHV+RPMNAFM+F++ R + + P+ N +SK LG W +L+ ++K + K A +++
Sbjct: 841 PHVRRPMNAFMIFSKRHRPLVHQQYPNKDNRTVSKILGEWWYSLAADQKAEYHKLATQVK 900
Query: 453 TQHKKQHPDYKYQPRRRKPPLASASTPRV 539
H K HPD+K+ + +K S +T V
Sbjct: 901 EAHFKAHPDWKWSTKEKKIKSESLNTTPV 929
>Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical
protein T22H6.6a protein.
Length = 1405
Score = 72.9 bits (171), Expect = 2e-13
Identities = 33/89 (37%), Positives = 54/89 (60%)
Frame = +3
Query: 273 PHVKRPMNAFMVFAQAMRRRLSAERPSLHNAELSKSLGSMWKNLSEEEKLPFIKEADKLR 452
PHV+RPMNAFM+F++ R + + P+ N +SK LG W +L+ ++K + K A +++
Sbjct: 841 PHVRRPMNAFMIFSKRHRPLVHQQYPNKDNRTVSKILGEWWYSLAADQKAEYHKLATQVK 900
Query: 453 TQHKKQHPDYKYQPRRRKPPLASASTPRV 539
H K HPD+K+ + +K S +T V
Sbjct: 901 EAHFKAHPDWKWSTKEKKIKSESLNTTPV 929
>Z50797-9|CAL36516.1| 640|Caenorhabditis elegans Hypothetical
protein T22H6.6b protein.
Length = 640
Score = 72.9 bits (171), Expect = 2e-13
Identities = 33/89 (37%), Positives = 54/89 (60%)
Frame = +3
Query: 273 PHVKRPMNAFMVFAQAMRRRLSAERPSLHNAELSKSLGSMWKNLSEEEKLPFIKEADKLR 452
PHV+RPMNAFM+F++ R + + P+ N +SK LG W +L+ ++K + K A +++
Sbjct: 76 PHVRRPMNAFMIFSKRHRPLVHQQYPNKDNRTVSKILGEWWYSLAADQKAEYHKLATQVK 135
Query: 453 TQHKKQHPDYKYQPRRRKPPLASASTPRV 539
H K HPD+K+ + +K S +T V
Sbjct: 136 EAHFKAHPDWKWSTKEKKIKSESLNTTPV 164
>AF043703-1|AAK21504.1| 437|Caenorhabditis elegans Posterior
pharynx defect protein 1 protein.
Length = 437
Score = 63.3 bits (147), Expect = 2e-10
Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Frame = +3
Query: 252 GGGCMRRPHVKRPMNAFMVFAQAMRRRLSAE--RPSLHNAELSKSLGSMWKNLSEEEKLP 425
GG + HVK+P+NAFM F + R+ L E +AEL+K LG W +LS+EE+
Sbjct: 182 GGKAKKDDHVKKPLNAFMWFMKENRKALLEEIGNNEKQSAELNKELGKRWHDLSKEEQAK 241
Query: 426 FIKEADKLRTQHKKQHPDYKYQPRRRKPPLASASTPRVKRESSPDRNH 569
+ + A K + HK+++P++ R + T + + +S P N+
Sbjct: 242 YFEMAKKDKETHKERYPEWS---ARENYAVNKKKTKKRRDKSIPSENN 286
>U37532-1|AAC05308.1| 438|Caenorhabditis elegans HMG-box protein
protein.
Length = 438
Score = 61.7 bits (143), Expect = 6e-10
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Frame = +3
Query: 252 GGGCMRRPHVKRPMNAFMVFAQAMRRRLSAE--RPSLHNAELSKSLGSMWKNLSEEEKLP 425
GG + HVK+P+NAF+ F + R+ L E +AEL+K LG W +LS+EE+
Sbjct: 183 GGKAKKDDHVKKPLNAFVWFMKENRKALLEEIGNNEKQSAELNKELGKRWHDLSKEEQAK 242
Query: 426 FIKEADKLRTQHKKQHPDYKYQPRRRKPPLASASTPRVKRESSPDRNH 569
+ + A K + HK+++P++ R + T + + +S P N+
Sbjct: 243 YFEMAKKDKETHKERYPEWS---ARENYAVNKKKTKKRRDKSIPSENN 287
>Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical protein
C26C6.1a protein.
Length = 1883
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/66 (30%), Positives = 36/66 (54%)
Frame = +3
Query: 273 PHVKRPMNAFMVFAQAMRRRLSAERPSLHNAELSKSLGSMWKNLSEEEKLPFIKEADKLR 452
P + + +++F+ +R+R+ E P E+SK +G WK LSEE+K + A+ +
Sbjct: 1447 PKAVKSKSGYILFSAEVRKRIMHENPDAGFGEVSKIVGIEWKKLSEEQKKHYEMRAEVVA 1506
Query: 453 TQHKKQ 470
+ KQ
Sbjct: 1507 VEKAKQ 1512
>Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical
protein C26C6.1a protein.
Length = 1883
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/66 (30%), Positives = 36/66 (54%)
Frame = +3
Query: 273 PHVKRPMNAFMVFAQAMRRRLSAERPSLHNAELSKSLGSMWKNLSEEEKLPFIKEADKLR 452
P + + +++F+ +R+R+ E P E+SK +G WK LSEE+K + A+ +
Sbjct: 1447 PKAVKSKSGYILFSAEVRKRIMHENPDAGFGEVSKIVGIEWKKLSEEQKKHYEMRAEVVA 1506
Query: 453 TQHKKQ 470
+ KQ
Sbjct: 1507 VEKAKQ 1512
>Z72503-5|CAI79155.1| 513|Caenorhabditis elegans Hypothetical
protein C26C6.1b protein.
Length = 513
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/66 (30%), Positives = 36/66 (54%)
Frame = +3
Query: 273 PHVKRPMNAFMVFAQAMRRRLSAERPSLHNAELSKSLGSMWKNLSEEEKLPFIKEADKLR 452
P + + +++F+ +R+R+ E P E+SK +G WK LSEE+K + A+ +
Sbjct: 77 PKAVKSKSGYILFSAEVRKRIMHENPDAGFGEVSKIVGIEWKKLSEEQKKHYEMRAEVVA 136
Query: 453 TQHKKQ 470
+ KQ
Sbjct: 137 VEKAKQ 142
>U22831-3|AAK67237.1| 234|Caenorhabditis elegans Hmg protein 1.2,
isoform b protein.
Length = 234
Score = 41.1 bits (92), Expect = 8e-04
Identities = 20/77 (25%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +3
Query: 273 PHV-KRPMNAFMVFAQAMRRRLSAERPSLHNAELSKSLGSMWKNLSEEEKLPFIKEADKL 449
PH KR ++AF ++Q R + A P ++++ LG MWK + +E K + ++A
Sbjct: 131 PHAPKRALSAFFFYSQDKRPEIQAGHPDWKVGQVAQELGKMWKLVPQETKDMYEQKAQAD 190
Query: 450 RTQHKKQHPDYKYQPRR 500
+ ++ + +YK + ++
Sbjct: 191 KDRYADEMRNYKAEMQK 207
>U22831-2|AAK67238.1| 233|Caenorhabditis elegans Hmg protein 1.2,
isoform c protein.
Length = 233
Score = 41.1 bits (92), Expect = 8e-04
Identities = 20/77 (25%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +3
Query: 273 PHV-KRPMNAFMVFAQAMRRRLSAERPSLHNAELSKSLGSMWKNLSEEEKLPFIKEADKL 449
PH KR ++AF ++Q R + A P ++++ LG MWK + +E K + ++A
Sbjct: 130 PHAPKRALSAFFFYSQDKRPEIQAGHPDWKVGQVAQELGKMWKLVPQETKDMYEQKAQAD 189
Query: 450 RTQHKKQHPDYKYQPRR 500
+ ++ + +YK + ++
Sbjct: 190 KDRYADEMRNYKAEMQK 206
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/99 (22%), Positives = 40/99 (40%), Gaps = 2/99 (2%)
Frame = +3
Query: 264 MRRPHVKRPMNAFMVFAQAMRRRLSAERPS--LHNAELSKSLGSMWKNLSEEEKLPFIKE 437
M +P V+ + + F + + P+ + E+SK WK + ++EK F +
Sbjct: 40 MGKPPVRGKTSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMVDDEKRRFYEL 99
Query: 438 ADKLRTQHKKQHPDYKYQPRRRKPPLASASTPRVKRESS 554
A K +++ + Y + RK A KR S
Sbjct: 100 AQKDAERYQAEVAAYGGEDAMRKRKRAKKDPHAPKRALS 138
>U22831-1|AAK20071.1| 235|Caenorhabditis elegans Hmg protein 1.2,
isoform a protein.
Length = 235
Score = 41.1 bits (92), Expect = 8e-04
Identities = 20/77 (25%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +3
Query: 273 PHV-KRPMNAFMVFAQAMRRRLSAERPSLHNAELSKSLGSMWKNLSEEEKLPFIKEADKL 449
PH KR ++AF ++Q R + A P ++++ LG MWK + +E K + ++A
Sbjct: 132 PHAPKRALSAFFFYSQDKRPEIQAGHPDWKVGQVAQELGKMWKLVPQETKDMYEQKAQAD 191
Query: 450 RTQHKKQHPDYKYQPRR 500
+ ++ + +YK + ++
Sbjct: 192 KDRYADEMRNYKAEMQK 208
>AF056577-1|AAC78599.1| 235|Caenorhabditis elegans high mobility
group protein 1.2 protein.
Length = 235
Score = 41.1 bits (92), Expect = 8e-04
Identities = 20/77 (25%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +3
Query: 273 PHV-KRPMNAFMVFAQAMRRRLSAERPSLHNAELSKSLGSMWKNLSEEEKLPFIKEADKL 449
PH KR ++AF ++Q R + A P ++++ LG MWK + +E K + ++A
Sbjct: 132 PHAPKRALSAFFFYSQDKRPEIQAGHPDWKVGQVAQELGKMWKLVPQETKDMYEQKAQAD 191
Query: 450 RTQHKKQHPDYKYQPRR 500
+ ++ + +YK + ++
Sbjct: 192 KDRYADEMRNYKAEMQK 208
>Z81137-2|CAB03465.1| 386|Caenorhabditis elegans Hypothetical
protein W02D9.3 protein.
Length = 386
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/68 (27%), Positives = 39/68 (57%)
Frame = +3
Query: 282 KRPMNAFMVFAQAMRRRLSAERPSLHNAELSKSLGSMWKNLSEEEKLPFIKEADKLRTQH 461
KR + ++ F + RR S + + E++ SL + W+ L+ EE++PF + AD+ + ++
Sbjct: 128 KRNRSGYVHFI--IHRRASYSKAVMSQREINISLAADWQKLTAEERIPFQQRADEEKVKY 185
Query: 462 KKQHPDYK 485
+ +YK
Sbjct: 186 LELMEEYK 193
>AC024859-13|AAK29965.2| 338|Caenorhabditis elegans Hypothetical
protein Y71H2AM.17 protein.
Length = 338
Score = 37.9 bits (84), Expect = 0.008
Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +3
Query: 267 RRPHV-KRPMNAFMVFAQAMRRRLSAERPSLHNAELSKSLGSMWKNLSEEEKLPFIKEAD 443
R P V +RP+ +M +++ M ++ AE P ++ K +G W +L + EK + E +
Sbjct: 21 RGPKVPERPLQPYMRYSRKMWPKVRAENPEAQLWDIGKMIGKYWLDLPDGEKSHYQHEYE 80
Query: 444 KLRTQHKKQ 470
+ ++KQ
Sbjct: 81 LEKADYEKQ 89
>AF000195-3|AAC24268.1| 689|Caenorhabditis elegans Hmg protein 3
protein.
Length = 689
Score = 34.3 bits (75), Expect = 0.096
Identities = 20/90 (22%), Positives = 47/90 (52%)
Frame = +3
Query: 282 KRPMNAFMVFAQAMRRRLSAERPSLHNAELSKSLGSMWKNLSEEEKLPFIKEADKLRTQH 461
KR A++++ A R + + +L +++K G+ WK++S ++K + +A + + ++
Sbjct: 562 KRATTAYIIWFNANRNSMKEDGDTL--GDVAKKAGAKWKSMSADDKKEWNDKAAQDKARY 619
Query: 462 KKQHPDYKYQPRRRKPPLASASTPRVKRES 551
+ + +YK + + AS P K+ S
Sbjct: 620 EAEMKEYK----KNGGGVEKASGPSTKKSS 645
>S47168-2|AAB23866.2| 919|Caenorhabditis elegans UNC-5 protein.
Length = 919
Score = 33.1 bits (72), Expect = 0.22
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Frame = +1
Query: 229 QYCRNQRKVVGVCVVHTSRDR*MHSWCSRKRCAAVC-RPNDPPCTTPNSANH*DPC 393
+YC+ + ++ C V D SW C++ C R CT P N PC
Sbjct: 255 EYCKGEEEMTRSCKVPCKLDGGWSSWSDWSACSSSCHRYRTRACTVPPPMNGGQPC 310
>S47168-1|AAB23867.2| 947|Caenorhabditis elegans UNC-5 protein.
Length = 947
Score = 33.1 bits (72), Expect = 0.22
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Frame = +1
Query: 229 QYCRNQRKVVGVCVVHTSRDR*MHSWCSRKRCAAVC-RPNDPPCTTPNSANH*DPC 393
+YC+ + ++ C V D SW C++ C R CT P N PC
Sbjct: 283 EYCKGEEEMTRSCKVPCKLDGGWSSWSDWSACSSSCHRYRTRACTVPPPMNGGQPC 338
>AF036698-5|AAB88356.2| 567|Caenorhabditis elegans Uncoordinated
protein 5, isoform b protein.
Length = 567
Score = 33.1 bits (72), Expect = 0.22
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Frame = +1
Query: 229 QYCRNQRKVVGVCVVHTSRDR*MHSWCSRKRCAAVC-RPNDPPCTTPNSANH*DPC 393
+YC+ + ++ C V D SW C++ C R CT P N PC
Sbjct: 255 EYCKGEEEMTRSCKVPCKLDGGWSSWSDWSACSSSCHRYRTRACTVPPPMNGGQPC 310
>AF036698-4|AAB88355.1| 919|Caenorhabditis elegans Uncoordinated
protein 5, isoform a protein.
Length = 919
Score = 33.1 bits (72), Expect = 0.22
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Frame = +1
Query: 229 QYCRNQRKVVGVCVVHTSRDR*MHSWCSRKRCAAVC-RPNDPPCTTPNSANH*DPC 393
+YC+ + ++ C V D SW C++ C R CT P N PC
Sbjct: 255 EYCKGEEEMTRSCKVPCKLDGGWSSWSDWSACSSSCHRYRTRACTVPPPMNGGQPC 310
>Z73102-17|CAA97418.2| 375|Caenorhabditis elegans Hypothetical
protein B0035.16 protein.
Length = 375
Score = 30.3 bits (65), Expect = 1.6
Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 6/145 (4%)
Frame = +3
Query: 300 FMVFAQAMRRRLSAERPSL-HNAELSKSLGSMWKNLSEEEKLPFIKEADKLRTQHKKQHP 476
F VF + R + +A+ + H A + + G +N + +++ D L+ Q
Sbjct: 105 FDVFHKIAREKFNADFIATGHYA--TTNFGDFQQNAKDSDEIRLFSGKDPLKDQTFFLCT 162
Query: 477 DYKYQPRRRKPPLASASTPRVKRESSPDRNHIDFSGMPEISAALLMDGPPDGTE-LDQYL 653
+ Q +R PL S VKR + ++ + + PE + ++ LD+Y+
Sbjct: 163 VNQEQLKRAMFPLGSLQKSEVKRIAE-EQGFQEVAKKPESMGICFIGKKKRFSDFLDEYI 221
Query: 654 EPRP----VPNYHELQPRYGTHTLT 716
EP+P + N E+ +G H T
Sbjct: 222 EPKPGRILLKNGSEIGNHHGIHQFT 246
>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
Length = 4250
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 513 LASASTPRVKRESSPDRNHIDFSGMPEISAALLMDGPPDGTELDQ-YLEPRPVP 671
+A PR RE +PD +H G P+ ++AL GPP+ E Q +LE + P
Sbjct: 2924 IAEIEAPRPAREDAPDADH----GPPKFTSALA--GPPELQEGQQAHLECQVTP 2971
>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform b protein.
Length = 4203
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 513 LASASTPRVKRESSPDRNHIDFSGMPEISAALLMDGPPDGTELDQ-YLEPRPVP 671
+A PR RE +PD +H G P+ ++AL GPP+ E Q +LE + P
Sbjct: 2841 IAEIEAPRPAREDAPDADH----GPPKFTSALA--GPPELQEGQQAHLECQVTP 2888
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform a protein.
Length = 4488
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 513 LASASTPRVKRESSPDRNHIDFSGMPEISAALLMDGPPDGTELDQ-YLEPRPVP 671
+A PR RE +PD +H G P+ ++AL GPP+ E Q +LE + P
Sbjct: 3162 IAEIEAPRPAREDAPDADH----GPPKFTSALA--GPPELQEGQQAHLECQVTP 3209
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform d protein.
Length = 4369
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 513 LASASTPRVKRESSPDRNHIDFSGMPEISAALLMDGPPDGTELDQ-YLEPRPVP 671
+A PR RE +PD +H G P+ ++AL GPP+ E Q +LE + P
Sbjct: 3162 IAEIEAPRPAREDAPDADH----GPPKFTSALA--GPPELQEGQQAHLECQVTP 3209
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform c protein.
Length = 4447
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 513 LASASTPRVKRESSPDRNHIDFSGMPEISAALLMDGPPDGTELDQ-YLEPRPVP 671
+A PR RE +PD +H G P+ ++AL GPP+ E Q +LE + P
Sbjct: 3162 IAEIEAPRPAREDAPDADH----GPPKFTSALA--GPPELQEGQQAHLECQVTP 3209
>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
Length = 4219
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 513 LASASTPRVKRESSPDRNHIDFSGMPEISAALLMDGPPDGTELDQ-YLEPRPVP 671
+A PR RE +PD +H G P+ ++AL GPP+ E Q +LE + P
Sbjct: 2857 IAEIEAPRPAREDAPDADH----GPPKFTSALA--GPPELQEGQQAHLECQVTP 2904
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 492 PRRRKPPLASASTPRVKRESSPDRN 566
PRRR+ P AS S P +R SP ++
Sbjct: 302 PRRRRSPSASKSPPPARRRRSPSQS 326
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 29.1 bits (62), Expect = 3.6
Identities = 9/36 (25%), Positives = 21/36 (58%)
Frame = -2
Query: 655 SRYWSNSVPSGGPSISKAADISGMPEKSMWFRSGDD 548
+++ + + G S++ A + G PE+ +W R+G +
Sbjct: 6446 TKHLGGEIVNNGESVTFEARVQGTPEEVLWMRNGQE 6481
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 29.1 bits (62), Expect = 3.6
Identities = 9/36 (25%), Positives = 21/36 (58%)
Frame = -2
Query: 655 SRYWSNSVPSGGPSISKAADISGMPEKSMWFRSGDD 548
+++ + + G S++ A + G PE+ +W R+G +
Sbjct: 6975 TKHLGGEIVNNGESVTFEARVQGTPEEVLWMRNGQE 7010
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 29.1 bits (62), Expect = 3.6
Identities = 9/36 (25%), Positives = 21/36 (58%)
Frame = -2
Query: 655 SRYWSNSVPSGGPSISKAADISGMPEKSMWFRSGDD 548
+++ + + G S++ A + G PE+ +W R+G +
Sbjct: 6656 TKHLGGEIVNNGESVTFEARVQGTPEEVLWMRNGQE 6691
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 29.1 bits (62), Expect = 3.6
Identities = 9/36 (25%), Positives = 21/36 (58%)
Frame = -2
Query: 655 SRYWSNSVPSGGPSISKAADISGMPEKSMWFRSGDD 548
+++ + + G S++ A + G PE+ +W R+G +
Sbjct: 6446 TKHLGGEIVNNGESVTFEARVQGTPEEVLWMRNGQE 6481
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 29.1 bits (62), Expect = 3.6
Identities = 9/36 (25%), Positives = 21/36 (58%)
Frame = -2
Query: 655 SRYWSNSVPSGGPSISKAADISGMPEKSMWFRSGDD 548
+++ + + G S++ A + G PE+ +W R+G +
Sbjct: 6975 TKHLGGEIVNNGESVTFEARVQGTPEEVLWMRNGQE 7010
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 29.1 bits (62), Expect = 3.6
Identities = 9/36 (25%), Positives = 21/36 (58%)
Frame = -2
Query: 655 SRYWSNSVPSGGPSISKAADISGMPEKSMWFRSGDD 548
+++ + + G S++ A + G PE+ +W R+G +
Sbjct: 6656 TKHLGGEIVNNGESVTFEARVQGTPEEVLWMRNGQE 6691
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 29.1 bits (62), Expect = 3.6
Identities = 9/36 (25%), Positives = 21/36 (58%)
Frame = -2
Query: 655 SRYWSNSVPSGGPSISKAADISGMPEKSMWFRSGDD 548
+++ + + G S++ A + G PE+ +W R+G +
Sbjct: 5865 TKHLGGEIVNNGESVTFEARVQGTPEEVLWMRNGQE 5900
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -2
Query: 637 SVPSGGPSISKAADISGMPEKSMWFRSGDD 548
SVP G P + + +I G P+ W+++GD+
Sbjct: 4222 SVPKGTPLVLEV-EIEGKPKDVKWYKNGDE 4250
>AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical
protein C17F3.3 protein.
Length = 253
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 2/89 (2%)
Frame = +3
Query: 408 EEEKLPFIKEADKLRTQHKKQHPDYKYQPRR--RKPPLASASTPRVKRESSPDRNHIDFS 581
E+EK KE K + K + D K ++ +KP VK+E+ + +
Sbjct: 125 EDEKKEESKEKSKDEEKKKDEVKDKKEDEKKDDKKPGEKEEKKEEVKKETKKEEKKEEKK 184
Query: 582 GMPEISAALLMDGPPDGTELDQYLEPRPV 668
P+ S A +G P G + L P+
Sbjct: 185 EEPKKSEAPKKEGEPKGEVKNNALVENPI 213
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -2
Query: 637 SVPSGGPSISKAADISGMPEKSMWFRSGDD 548
SVP G P + + +I G P+ W+++GD+
Sbjct: 3582 SVPKGTPLVLEV-EIEGKPKDVKWYKNGDE 3610
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -2
Query: 637 SVPSGGPSISKAADISGMPEKSMWFRSGDD 548
SVP G P + + +I G P+ W+++GD+
Sbjct: 4222 SVPKGTPLVLEV-EIEGKPKDVKWYKNGDE 4250
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -2
Query: 637 SVPSGGPSISKAADISGMPEKSMWFRSGDD 548
SVP G P + + +I G P+ W+++GD+
Sbjct: 4222 SVPKGTPLVLEV-EIEGKPKDVKWYKNGDE 4250
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -2
Query: 637 SVPSGGPSISKAADISGMPEKSMWFRSGDD 548
SVP G P + + +I G P+ W+++GD+
Sbjct: 3582 SVPKGTPLVLEV-EIEGKPKDVKWYKNGDE 3610
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -2
Query: 637 SVPSGGPSISKAADISGMPEKSMWFRSGDD 548
SVP G P + + +I G P+ W+++GD+
Sbjct: 4222 SVPKGTPLVLEV-EIEGKPKDVKWYKNGDE 4250
>Z30423-12|CAA83006.2| 486|Caenorhabditis elegans Hypothetical
protein T20G5.6 protein.
Length = 486
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -2
Query: 262 HPPPFVGCGSIVS*SNIFTSFPTASFISSLSPDLS-RSW 149
+P PF ++ +N+F +P F S SPD S R W
Sbjct: 356 YPLPFYAAVQLLK-NNLFLGYPQTPFTSCYSPDKSLREW 393
>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
B0207.5 protein.
Length = 3279
Score = 28.3 bits (60), Expect = 6.3
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
Frame = +3
Query: 306 VFAQAMRRRLSAERPSL--HNAELSKSLGSMWKNLSEEEK--LPFIKEADKLRTQHKKQH 473
+F A + + +PS+ N+E K GS + +EK + D R + K ++
Sbjct: 2491 IFRWAHKPGRKSAKPSITERNSEFYKIGGSHEEENHRKEKNQKKWKNREDTFRRRRKPEY 2550
Query: 474 PDYKYQPRRRKPPLASASTPRVKRESSPDR 563
+ + RRKP S ++ S PDR
Sbjct: 2551 EEESEELGRRKPRFGEESEEFERKGSRPDR 2580
>AL022593-1|CAA18634.1| 129|Caenorhabditis elegans Hypothetical
protein C49G9.1 protein.
Length = 129
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +3
Query: 501 RKPPLASASTPRVKRESSPDRNHIDFSGMPEISAALLMDGPPDGTELDQYLEP 659
R+P S + V + P+ I + P + ++++ PP+ E DQY+ P
Sbjct: 64 REPKPTSEAAQEVP--NGPELPQISEAPPPMLPVVIVLENPPEYAENDQYMPP 114
>AF040652-7|AAB95017.1| 210|Caenorhabditis elegans Hypothetical
protein T05A8.6 protein.
Length = 210
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/63 (30%), Positives = 25/63 (39%)
Frame = +2
Query: 575 FLGHAGNIRCFTNGRPTGRYRIRPVPRAQTGAKLPRATTSIRNAYTNAPRTATSIRSGTV 754
FL +C T G T R++PV GA TT+ T AP T+ T
Sbjct: 47 FLYETSQKKCTTCGTTTKPVRVKPVLTTTPGA--TTVTTTTAPTTTKAPDCTTTTAPTTT 104
Query: 755 PSP 763
+P
Sbjct: 105 KAP 107
>AF031935-1|AAB87066.1| 486|Caenorhabditis elegans UNC-47 protein.
Length = 486
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -2
Query: 262 HPPPFVGCGSIVS*SNIFTSFPTASFISSLSPDLS-RSW 149
+P PF ++ +N+F +P F S SPD S R W
Sbjct: 356 YPLPFYAAVQLLK-NNLFLGYPQTPFTSCYSPDKSLREW 393
>AC024751-6|AAK21506.1| 270|Caenorhabditis elegans Hypothetical
protein Y18H1A.2 protein.
Length = 270
Score = 28.3 bits (60), Expect = 6.3
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 7/82 (8%)
Frame = +3
Query: 324 RRRLSAERPSLHNAELSKSLGSMWKNLSEEEKLPFIKEADKLRTQHKKQHPDYKYQ---- 491
RR+ P L EL + ++ EEK + DK + + K +H D +
Sbjct: 140 RRKARDALPCLKRKELEEERKRKREDSDSEEKAKKRHKKDKKKKKKKHRHRDSSEERQLE 199
Query: 492 ---PRRRKPPLASASTPRVKRE 548
R R+ LAS R+KRE
Sbjct: 200 EEYDRERRQKLASMRDERLKRE 221
>Z75711-6|CAB00037.3| 387|Caenorhabditis elegans Hypothetical
protein K02B12.8 protein.
Length = 387
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/43 (25%), Positives = 23/43 (53%)
Frame = -2
Query: 463 LCCVRNLSASLMKGSFSSSLKFFHMDPNDLLSSALCREGRSAD 335
L C +N+ + G+ SS +K + DP +++ +L + + D
Sbjct: 40 LICKKNVRLVRLDGNISSGIKIYFADPIKMVADSLAKIQKKID 82
>Z73899-9|CAA98072.2| 905|Caenorhabditis elegans Hypothetical
protein ZK829.2 protein.
Length = 905
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/59 (20%), Positives = 29/59 (49%)
Frame = +3
Query: 195 VGKLVKIFDYDTILPQPTKGGGCMRRPHVKRPMNAFMVFAQAMRRRLSAERPSLHNAEL 371
+G+++ + + P+ ++GGGCM+R + + M RR+ L ++++
Sbjct: 464 LGEMMALPKEFLLFPEASRGGGCMQRSDTESNFLVLVAARTDMIRRMKQRDKRLRSSDI 522
>Z11576-1|CAA77663.1| 625|Caenorhabditis elegans aromatic-L-amino
acid decarboxylaseprotein.
Length = 625
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/59 (20%), Positives = 29/59 (49%)
Frame = +3
Query: 195 VGKLVKIFDYDTILPQPTKGGGCMRRPHVKRPMNAFMVFAQAMRRRLSAERPSLHNAEL 371
+G+++ + + P+ ++GGGCM+R + + M RR+ L ++++
Sbjct: 184 LGEMMALPKEFLLFPEASRGGGCMQRSDTESNFLVLVAARTDMIRRMKQRDKRLRSSDI 242
>U97592-1|AAB52871.3| 638|Caenorhabditis elegans Temporarily
assigned gene nameprotein 150, isoform b protein.
Length = 638
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = +3
Query: 501 RKPPLASASTPRVKRESSPDRNHIDFSGMPEISAALLMDGPPDGTELDQYLEPRPVPN 674
+KPP TP K + + +N +D +P S + P GT L E R V N
Sbjct: 192 QKPPPVQVVTPEKKSKKNSSKNELDSKDVPSCSG----ESTPAGT-LSPRRETREVTN 244
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,157,935
Number of Sequences: 27780
Number of extensions: 511169
Number of successful extensions: 1824
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 1609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1821
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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