Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30m13
         (697 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0027 - 195879-196093,196242-196278,196985-197041,197519-19...    77   2e-14
10_06_0035 - 9896289-9896390,9897394-9897503,9897587-9897715,989...    28   8.1  
04_01_0069 - 697811-697876,697956-698166,698265-698359,698448-69...    28   8.1  

>07_01_0027 -
           195879-196093,196242-196278,196985-197041,197519-197680,
           198653-198760
          Length = 192

 Score = 76.6 bits (180), Expect = 2e-14
 Identities = 35/64 (54%), Positives = 48/64 (75%)
 Frame = +2

Query: 506 IGYIKTQKVVLLEDLAAHFKLKTQAAIDRITELQASGELTGVIDDRGKFIYISQSELESI 685
           + YIK QK V LEDLAA F+++TQ  I+RI  L+    L+GV+DDRGKFIYIS  E++++
Sbjct: 86  VEYIKNQKCVPLEDLAAEFRMRTQDCINRIITLEGMDRLSGVMDDRGKFIYISTEEMKAV 145

Query: 686 AKFI 697
           A +I
Sbjct: 146 ADYI 149


>10_06_0035 -
           9896289-9896390,9897394-9897503,9897587-9897715,
           9898734-9898800,9898888-9898970,9899878-9899959,
           9900049-9900125,9900206-9900289,9900368-9900437,
           9900580-9900668,9900921-9901613,9902833-9903142
          Length = 631

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 4/42 (9%)
 Frame = +1

Query: 4   SCCQTKG---C-CPKGWRTRSSTSC*ESKGADESECCSAPSC 117
           S CQ  G   C CP G+R      C +     E + C  P C
Sbjct: 493 SACQESGNGKCQCPAGFRGDGVKKCEDINECKEKKACQCPEC 534


>04_01_0069 -
           697811-697876,697956-698166,698265-698359,698448-698513,
           698595-698643,698720-698770,698856-698908,699263-699331,
           699874-699928,700011-700099,700217-700302,700376-700432,
           700575-700716,701637-702032
          Length = 494

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +2

Query: 587 DRITELQASGELTGVIDDRGKFIYISQSELESIAKF 694
           D I E Q       V +DR K +Y+S+ ++ +I +F
Sbjct: 313 DEIMEAQEKLNALRVDEDRRKLLYVSKEDINAIPRF 348


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,017,029
Number of Sequences: 37544
Number of extensions: 143406
Number of successful extensions: 313
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 313
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)