Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30m13
         (697 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    23   2.1  
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    23   3.7  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   4.8  
AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein pro...    22   4.8  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   6.4  

>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +1

Query: 7   CCQTKGCCPKGWRTRSSTSC*ESKGADE 90
           CC+T+    + W TR S  C  S    E
Sbjct: 344 CCKTRIIGRRSWVTRESQICNNSSSDKE 371


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 629 VIDDRGKFIYISQSELESIAKFI 697
           ++   GKF ++SQ+  E  AK +
Sbjct: 1   MVQFEGKFQFVSQNNFEEFAKVL 23


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -1

Query: 106 PSSIRSHPRPLIPNSLYSTGSSIPLDNSPWSGSS 5
           P    S P P  P+S +S+ S   L +  ++G S
Sbjct: 84  PGGGSSSPSPSSPSSFFSSVSPTSLGSENYTGIS 117


>AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein
           protein.
          Length = 105

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 644 GKFIYISQSELESIAKFI 697
           GKF ++SQ+  E  AK +
Sbjct: 4   GKFQFVSQNNFEEFAKVL 21


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 13/52 (25%), Positives = 24/52 (46%)
 Frame = +2

Query: 542 EDLAAHFKLKTQAAIDRITELQASGELTGVIDDRGKFIYISQSELESIAKFI 697
           +D  +H+ L T     R  ++   G  T  I ++     + QSE E+++  I
Sbjct: 456 KDSISHYHLYTNLTALRKRDVLKKGNFTIEILNKTVLAVVRQSEEEAVSLLI 507


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,980
Number of Sequences: 438
Number of extensions: 1341
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)