Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30m11
         (774 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    27   0.49 
DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.        26   1.1  
AJ419878-1|CAD12038.1|   77|Anopheles gambiae Sec61 protein prot...    25   2.6  
Z69978-1|CAA93818.1|  268|Anopheles gambiae serine protease prot...    24   4.5  

>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 27.5 bits (58), Expect = 0.49
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 693  QVMHKITEILLRYDQSNPINPNNI 764
            +V H+I   LL Y  S+P+N NN+
Sbjct: 968  EVFHEIRVELLGYGTSDPVNENNL 991


>DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.
          Length = 418

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 206 YSDFASKYGDEFSWQAVKE 262
           Y  FA  + D+F W  +KE
Sbjct: 37  YEPFAGPWNDDFDWSVIKE 55


>AJ419878-1|CAD12038.1|   77|Anopheles gambiae Sec61 protein
           protein.
          Length = 77

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 520 RITFYFNFIWIVLTMFSYLVCVLCTFTIF 434
           +I F    +W  +T+F +LVC  C   +F
Sbjct: 25  KIQFREKVLWTAITLFIFLVC--CQIPLF 51


>Z69978-1|CAA93818.1|  268|Anopheles gambiae serine protease
           protein.
          Length = 268

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +3

Query: 666 NEISSYEAAQVMHKITEILLRYDQSNPINPNNI 764
           ++ S Y+A     +I E+ +  D    + PN+I
Sbjct: 93  HDFSQYDAGVQRRRIAEMYVHEDYEGSVGPNDI 125


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 703,935
Number of Sequences: 2352
Number of extensions: 12123
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80665782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)