Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30m11
(774 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41012-7|AAM75375.1| 639|Caenorhabditis elegans Hypothetical pr... 31 1.2
U41012-6|AAM75376.1| 642|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z81530-1|CAB04312.1| 290|Caenorhabditis elegans Hypothetical pr... 29 3.7
AF039710-7|AAB96687.1| 123|Caenorhabditis elegans Hypothetical ... 29 4.9
Z81042-7|CAE46660.1| 371|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z73976-9|CAA98280.2| 371|Caenorhabditis elegans Hypothetical pr... 28 6.4
U61235-1|AAB17540.1| 485|Caenorhabditis elegans ZK protein. 28 6.4
U21308-4|AAB93321.1| 484|Caenorhabditis elegans Warthog (hedgeh... 28 6.4
Z82278-9|CAE17877.1| 323|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z82070-8|CAE17980.1| 323|Caenorhabditis elegans Hypothetical pr... 28 8.5
AL022272-3|CAA18353.1| 322|Caenorhabditis elegans Hypothetical ... 28 8.5
>U41012-7|AAM75375.1| 639|Caenorhabditis elegans Hypothetical
protein C06A6.2a protein.
Length = 639
Score = 30.7 bits (66), Expect = 1.2
Identities = 10/39 (25%), Positives = 21/39 (53%)
Frame = +2
Query: 110 MNLKLVKFIESRPYMWNPKDPLYTSISAKDQAYSDFASK 226
M + L+ I+ +P +W P ++ A++Q + DF +
Sbjct: 246 MYMALIDMIQDKPELWQSNHPQKDNLQAQEQLFEDFGKQ 284
>U41012-6|AAM75376.1| 642|Caenorhabditis elegans Hypothetical
protein C06A6.2b protein.
Length = 642
Score = 30.7 bits (66), Expect = 1.2
Identities = 10/39 (25%), Positives = 21/39 (53%)
Frame = +2
Query: 110 MNLKLVKFIESRPYMWNPKDPLYTSISAKDQAYSDFASK 226
M + L+ I+ +P +W P ++ A++Q + DF +
Sbjct: 246 MYMALIDMIQDKPELWQSNHPQKDNLQAQEQLFEDFGKQ 284
>Z81530-1|CAB04312.1| 290|Caenorhabditis elegans Hypothetical
protein F36D1.1 protein.
Length = 290
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/102 (20%), Positives = 45/102 (44%), Gaps = 7/102 (6%)
Frame = +2
Query: 98 WTRKMNLKLVKFIESRPYMWNPK---DPLYTSI--SAKDQAYSDFASKY--GDEFSWQAV 256
WT L+ I +RP +W+ + Y ++ S + S+ S + +F+ + V
Sbjct: 4 WTDPSRQCLINAIRNRPVIWDKNYFGESNYRTLKTSCLREVTSELNSMFQMPIKFTCEDV 63
Query: 257 KERWTNIRSTYNNYLRKIKASRTKRDGEIYKVNWHLWTACSF 382
+ +W N++ T+ LR + + D + + W + +F
Sbjct: 64 RSQWKNLKDTFVRKLRWVHEGKYMEDA-MKEPTWKFYRMLTF 104
>AF039710-7|AAB96687.1| 123|Caenorhabditis elegans Hypothetical
protein C46E10.2 protein.
Length = 123
Score = 28.7 bits (61), Expect = 4.9
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = -1
Query: 168 SLGFHI*GRLSINLTNFRFIFLVQNTFSLAKSAVIVDTH*CLVKNIVYIL*VMLLF 1
+L F I +L + L+NF++ FLV N FS V TH +V+ + V ++F
Sbjct: 29 TLIFLIFQKLPVFLSNFKY-FLVNNAFSQLALVVFAFTHSAVVQGSGMAILVTIVF 83
>Z81042-7|CAE46660.1| 371|Caenorhabditis elegans Hypothetical
protein T07C12.11 protein.
Length = 371
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +2
Query: 116 LKLVKFIESRPYMWNPKDPLYTSISAKDQAYSDFASKYGDEFSWQAVKERWTNIRSTYNN 295
L L+ ++ P ++N DPL+ K + + + + G + ++ +W ++R Y
Sbjct: 20 LALIDSVQRNPCVYNRYDPLHKVTDYKHEIWKLISIEIGYDGQPVELERKWKHMRDKYVR 79
Query: 296 YLRKIKASRTKRDGEIYKVN-WH 361
LRK + K+ I K N W+
Sbjct: 80 -LRK----QDKQKAPIKKTNKWY 97
>Z73976-9|CAA98280.2| 371|Caenorhabditis elegans Hypothetical
protein T07C12.11 protein.
Length = 371
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +2
Query: 116 LKLVKFIESRPYMWNPKDPLYTSISAKDQAYSDFASKYGDEFSWQAVKERWTNIRSTYNN 295
L L+ ++ P ++N DPL+ K + + + + G + ++ +W ++R Y
Sbjct: 20 LALIDSVQRNPCVYNRYDPLHKVTDYKHEIWKLISIEIGYDGQPVELERKWKHMRDKYVR 79
Query: 296 YLRKIKASRTKRDGEIYKVN-WH 361
LRK + K+ I K N W+
Sbjct: 80 -LRK----QDKQKAPIKKTNKWY 97
>U61235-1|AAB17540.1| 485|Caenorhabditis elegans ZK protein.
Length = 485
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = -3
Query: 172 WIFRIPHIRAAFDKLNQLQ--IHFSSPEHFLF 83
W+ R+P +AAF KL Q I +P+HF++
Sbjct: 332 WLHRLPDTKAAFIKLTTEQGAIIDMTPQHFIY 363
>U21308-4|AAB93321.1| 484|Caenorhabditis elegans Warthog
(hedgehog-like family)protein 1 protein.
Length = 484
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = -3
Query: 172 WIFRIPHIRAAFDKLNQLQ--IHFSSPEHFLF 83
W+ R+P +AAF KL Q I +P+HF++
Sbjct: 331 WLHRLPDTKAAFIKLTTEQGAIIDMTPQHFIY 362
>Z82278-9|CAE17877.1| 323|Caenorhabditis elegans Hypothetical
protein W04E12.9 protein.
Length = 323
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 452 VYFHHFHSKIVSIHYCFLYLILIRNYRQSRD 360
++F HF S I S ++ L L+R+YR++ D
Sbjct: 67 IWFTHFDSLISSFNFTLLIGNLLRSYRKTYD 97
>Z82070-8|CAE17980.1| 323|Caenorhabditis elegans Hypothetical
protein W04E12.9 protein.
Length = 323
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 452 VYFHHFHSKIVSIHYCFLYLILIRNYRQSRD 360
++F HF S I S ++ L L+R+YR++ D
Sbjct: 67 IWFTHFDSLISSFNFTLLIGNLLRSYRKTYD 97
>AL022272-3|CAA18353.1| 322|Caenorhabditis elegans Hypothetical
protein H12C20.5 protein.
Length = 322
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = -2
Query: 476 VLLSGLCSVYFHHFHSKIVSIHYCFLYLILIRNYR 372
V ++ C+++F +SKI S+ + + LILI YR
Sbjct: 107 VAVNRFCALFFPTKYSKIFSVSHTTIILILIYFYR 141
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,634,007
Number of Sequences: 27780
Number of extensions: 302336
Number of successful extensions: 943
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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