Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30m09
(755 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK021889-1|BAB13927.1| 142|Homo sapiens protein ( Homo sapiens ... 34 0.48
BC132822-1|AAI32823.1| 622|Homo sapiens hypothetical protein FL... 30 7.8
BC041481-1|AAH41481.2| 368|Homo sapiens FLJ35848 protein protein. 30 7.8
BC035159-1|AAH35159.1| 622|Homo sapiens hypothetical protein FL... 30 7.8
BC002670-1|AAH02670.1| 236|Homo sapiens SERTA domain containing... 30 7.8
AY130860-1|AAM77800.1| 236|Homo sapiens SCDK4-binding protein p... 30 7.8
AK223011-1|BAD96731.1| 236|Homo sapiens SERTA domain containing... 30 7.8
AK222970-1|BAD96690.1| 236|Homo sapiens SERTA domain containing... 30 7.8
AK093167-1|BAC04083.1| 604|Homo sapiens protein ( Homo sapiens ... 30 7.8
AF366402-1|AAK52831.1| 236|Homo sapiens TRIP-Br1 protein. 30 7.8
AF117959-1|AAF08349.1| 236|Homo sapiens CDK4-binding protein p3... 30 7.8
>AK021889-1|BAB13927.1| 142|Homo sapiens protein ( Homo sapiens
cDNA FLJ11827 fis, clone HEMBA1006502. ).
Length = 142
Score = 34.3 bits (75), Expect = 0.48
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = -2
Query: 637 RLFMRSFNPPIEYLT*AAV--TLKNTKPSFSYNLISLTMSIVMLLGSNQHFPRPTKGITR 464
R FMR I LT A + +KN +P Y LI + ++ L S+ FP+P K + +
Sbjct: 53 RHFMRPLYSGIHCLTTADIHNAMKNGEPLLIYLLIMIPLTSSPLFPSSSLFPQPNKKLKQ 112
Query: 463 IFPFKSYVPSILIL 422
I F + +++L
Sbjct: 113 IHIFVLFFAYLVLL 126
>BC132822-1|AAI32823.1| 622|Homo sapiens hypothetical protein
FLJ35848 protein.
Length = 622
Score = 30.3 bits (65), Expect = 7.8
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -3
Query: 210 IVSVQHHENNHRTRGHFSSTFSRNPVE-FGNNQHLHD 103
++ Q H N+HRTRG +S +R V F NN + D
Sbjct: 434 LLESQGHSNSHRTRGGDNSRVNRTQVSCFSNNYMMGD 470
>BC041481-1|AAH41481.2| 368|Homo sapiens FLJ35848 protein protein.
Length = 368
Score = 30.3 bits (65), Expect = 7.8
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -3
Query: 210 IVSVQHHENNHRTRGHFSSTFSRNPVE-FGNNQHLHD 103
++ Q H N+HRTRG +S +R V F NN + D
Sbjct: 53 LLESQGHSNSHRTRGGDNSRVNRTQVSCFSNNYMMGD 89
>BC035159-1|AAH35159.1| 622|Homo sapiens hypothetical protein
FLJ35848 protein.
Length = 622
Score = 30.3 bits (65), Expect = 7.8
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -3
Query: 210 IVSVQHHENNHRTRGHFSSTFSRNPVE-FGNNQHLHD 103
++ Q H N+HRTRG +S +R V F NN + D
Sbjct: 434 LLESQGHSNSHRTRGGDNSRVNRTQVSCFSNNYMMGD 470
>BC002670-1|AAH02670.1| 236|Homo sapiens SERTA domain containing 1
protein.
Length = 236
Score = 30.3 bits (65), Expect = 7.8
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +3
Query: 636 LFDGIQSLEES--TNAYLNENWRPVSESLRP 722
L DG++ L E T+ Y NE W P SE L+P
Sbjct: 166 LDDGLEGLFEDIDTSMYDNELWAPASEGLKP 196
>AY130860-1|AAM77800.1| 236|Homo sapiens SCDK4-binding protein
p34SEI1 protein.
Length = 236
Score = 30.3 bits (65), Expect = 7.8
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +3
Query: 636 LFDGIQSLEES--TNAYLNENWRPVSESLRP 722
L DG++ L E T+ Y NE W P SE L+P
Sbjct: 166 LDDGLEGLFEDIDTSMYDNELWAPASEGLKP 196
>AK223011-1|BAD96731.1| 236|Homo sapiens SERTA domain containing 1
variant protein.
Length = 236
Score = 30.3 bits (65), Expect = 7.8
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +3
Query: 636 LFDGIQSLEES--TNAYLNENWRPVSESLRP 722
L DG++ L E T+ Y NE W P SE L+P
Sbjct: 166 LDDGLEGLFEDIDTSMYDNELWAPASEGLKP 196
>AK222970-1|BAD96690.1| 236|Homo sapiens SERTA domain containing 1
variant protein.
Length = 236
Score = 30.3 bits (65), Expect = 7.8
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +3
Query: 636 LFDGIQSLEES--TNAYLNENWRPVSESLRP 722
L DG++ L E T+ Y NE W P SE L+P
Sbjct: 166 LDDGLEGLFEDIDTSMYDNELWAPASEGLKP 196
>AK093167-1|BAC04083.1| 604|Homo sapiens protein ( Homo sapiens
cDNA FLJ35848 fis, clone TESTI2006894. ).
Length = 604
Score = 30.3 bits (65), Expect = 7.8
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -3
Query: 210 IVSVQHHENNHRTRGHFSSTFSRNPVE-FGNNQHLHD 103
++ Q H N+HRTRG +S +R V F NN + D
Sbjct: 471 LLESQGHSNSHRTRGGDNSRVNRTQVSCFSNNYMMGD 507
>AF366402-1|AAK52831.1| 236|Homo sapiens TRIP-Br1 protein.
Length = 236
Score = 30.3 bits (65), Expect = 7.8
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +3
Query: 636 LFDGIQSLEES--TNAYLNENWRPVSESLRP 722
L DG++ L E T+ Y NE W P SE L+P
Sbjct: 166 LDDGLEGLFEDIDTSMYDNELWAPASEGLKP 196
>AF117959-1|AAF08349.1| 236|Homo sapiens CDK4-binding protein
p34SEI1 protein.
Length = 236
Score = 30.3 bits (65), Expect = 7.8
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +3
Query: 636 LFDGIQSLEES--TNAYLNENWRPVSESLRP 722
L DG++ L E T+ Y NE W P SE L+P
Sbjct: 166 LDDGLEGLFEDIDTSMYDNELWAPASEGLKP 196
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,056,507
Number of Sequences: 237096
Number of extensions: 2135831
Number of successful extensions: 4996
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4996
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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