Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30l24
         (651 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48809-2|CAA88747.1|  406|Caenorhabditis elegans Hypothetical pr...    31   0.54 
AF025452-3|AAB70939.2|  198|Caenorhabditis elegans Hypothetical ...    29   3.8  
U58734-6|AAB52505.3|  383|Caenorhabditis elegans Hypothetical pr...    28   6.6  

>Z48809-2|CAA88747.1|  406|Caenorhabditis elegans Hypothetical
           protein T01E8.4 protein.
          Length = 406

 Score = 31.5 bits (68), Expect = 0.54
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
 Frame = +2

Query: 443 TAPVGILSPVLINMLHLPTTERFLRALILCCQYYLQIA--DEMANRIIELEAKVRTPDCE 616
           T  + + S +L ++       + +  + L C+ +  I   D+  +R I  E KVR PDCE
Sbjct: 7   TELISLPSELLCHLFTYLPQRQLITEIPLVCRRFNTILNDDKFWSRRIRTEQKVRLPDCE 66

Query: 617 IIENEY 634
           +   EY
Sbjct: 67  LKHPEY 72


>AF025452-3|AAB70939.2|  198|Caenorhabditis elegans Hypothetical
           protein B0454.5 protein.
          Length = 198

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +2

Query: 338 DLIEQIRFRRRYQRKLQ-PGQADVITLQDVKDIAIFTAPVGILSPVLINML 487
           D IE  R RRRYQRK + P  +D   L+D    + F  P G +  VL+N+L
Sbjct: 96  DAIE--RLRRRYQRKRESPLPSDDGELRDATGRSGFPYPCGYIH-VLLNIL 143


>U58734-6|AAB52505.3|  383|Caenorhabditis elegans Hypothetical
           protein T27A10.7 protein.
          Length = 383

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -3

Query: 325 KLYGSSGRFC*YLNSFHWLWR 263
           K+YG SG++      FHWLWR
Sbjct: 304 KMYGESGKY------FHWLWR 318


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,443,238
Number of Sequences: 27780
Number of extensions: 302504
Number of successful extensions: 700
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 700
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)