Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30l23
         (683 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016452-11|AAB66012.1|  443|Caenorhabditis elegans Hypothetical...   176   1e-44
J05274-1|AAA27984.1|  360|Caenorhabditis elegans protein ( C.ele...    32   0.33 
AF067211-13|AAC16993.1|  360|Caenorhabditis elegans Protein kina...    32   0.33 
AC006607-6|AAF60370.2|  496|Caenorhabditis elegans Hypothetical ...    30   1.3  
AL021497-8|CAA16409.1|  334|Caenorhabditis elegans Hypothetical ...    29   2.3  
AC024799-9|AAK72312.1|  293|Caenorhabditis elegans Hypothetical ...    29   3.1  
Z71186-4|CAA94916.1|  867|Caenorhabditis elegans Hypothetical pr...    28   5.4  
AL132949-35|CAI70419.1|  466|Caenorhabditis elegans Hypothetical...    28   5.4  
AL132949-34|CAB61101.3|  574|Caenorhabditis elegans Hypothetical...    28   5.4  
Z83119-5|CAB05582.3| 1364|Caenorhabditis elegans Hypothetical pr...    27   9.4  

>AF016452-11|AAB66012.1|  443|Caenorhabditis elegans Hypothetical
           protein T05H4.6 protein.
          Length = 443

 Score =  176 bits (429), Expect = 1e-44
 Identities = 81/98 (82%), Positives = 94/98 (95%)
 Frame = +1

Query: 388 ESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKS 567
           + +ADRNVE+WKIK+LIKSLE+ARGNGTSMISLIIPPKDQ++R+ +MLA+E+GTASNIKS
Sbjct: 13  DDAADRNVEMWKIKRLIKSLELARGNGTSMISLIIPPKDQVARIQRMLAEEYGTASNIKS 72

Query: 568 RVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVT 681
           RVNRLSVLGAITSVQ RLKLY KVPPNGLV+YCGTI+T
Sbjct: 73  RVNRLSVLGAITSVQGRLKLYNKVPPNGLVVYCGTIMT 110


>J05274-1|AAA27984.1|  360|Caenorhabditis elegans protein (
           C.elegans casein kinaseII-alpha gene, complete cds. ).
          Length = 360

 Score = 32.3 bits (70), Expect = 0.33
 Identities = 22/55 (40%), Positives = 31/55 (56%)
 Frame = +1

Query: 421 KIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSRVNRLS 585
           KIK+ IK LE  RG GT++I+L+   KD ISR   ++ +     S+ K     LS
Sbjct: 76  KIKREIKILENLRG-GTNIITLLDVVKDPISRTPALIFEHVNN-SDFKQLYQTLS 128


>AF067211-13|AAC16993.1|  360|Caenorhabditis elegans Protein kinase
           protein 3 protein.
          Length = 360

 Score = 32.3 bits (70), Expect = 0.33
 Identities = 22/55 (40%), Positives = 31/55 (56%)
 Frame = +1

Query: 421 KIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSRVNRLS 585
           KIK+ IK LE  RG GT++I+L+   KD ISR   ++ +     S+ K     LS
Sbjct: 76  KIKREIKILENLRG-GTNIITLLDVVKDPISRTPALIFEHVNN-SDFKQLYQTLS 128


>AC006607-6|AAF60370.2|  496|Caenorhabditis elegans Hypothetical
           protein C09E7.5 protein.
          Length = 496

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 22/80 (27%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
 Frame = +1

Query: 361 NKKRNKMSEESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADE 540
           NKKR++ S+++   +N EI  +KK + SL  ++    +M S I     +++   K L + 
Sbjct: 124 NKKRDEASKKTLNSKNEEIEHLKKRVISLSNSQSENETMKSKI----SKLTESEKKLKET 179

Query: 541 FGTASNIKSRVN-RLSVLGA 597
            G  +  +++++ R+S L A
Sbjct: 180 NGKVTKSRNQLSERVSELEA 199


>AL021497-8|CAA16409.1|  334|Caenorhabditis elegans Hypothetical
           protein Y51A2D.12 protein.
          Length = 334

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
 Frame = +1

Query: 4   FIFPSDGEAFVRSFVQRHLLFL*CLNFVFHMLRG----NRNKKKSKNPRT 141
           +I  + G + +  F+   L+FL C N VF++L G    N  KK  K P T
Sbjct: 171 YIDTTYGRSNIYYFLMPALIFLTCFNIVFNVLAGIRLYNMKKKGVKVPET 220


>AC024799-9|AAK72312.1|  293|Caenorhabditis elegans Hypothetical
           protein Y49C4A.1 protein.
          Length = 293

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -3

Query: 189 HFLVYIYVCGCSDFSSCAGILGFFLI 112
           HFL+      CS+ ++C  I+ FF++
Sbjct: 79  HFLIVYLALPCSNIAACRSIIAFFIV 104


>Z71186-4|CAA94916.1|  867|Caenorhabditis elegans Hypothetical
           protein F23D12.5 protein.
          Length = 867

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +3

Query: 417 MEDKETYKEFGNGQRKWNIDDIPDHST*GSNLESIKDVG 533
           M DK T +  GN    ++ + +        N ES+KD+G
Sbjct: 476 MNDKNTVQRLGNAWAVFDFEGVTQLRDFAKNYESLKDIG 514


>AL132949-35|CAI70419.1|  466|Caenorhabditis elegans Hypothetical
           protein Y53F4B.27b protein.
          Length = 466

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 10/24 (41%), Positives = 19/24 (79%)
 Frame = +1

Query: 91  HMLRGNRNKKKSKNPRTRRKVRAT 162
           H ++GN  KK++K+ +TR+K R++
Sbjct: 84  HEVQGNVTKKRTKHSKTRQKARSS 107


>AL132949-34|CAB61101.3|  574|Caenorhabditis elegans Hypothetical
           protein Y53F4B.27a protein.
          Length = 574

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 10/24 (41%), Positives = 19/24 (79%)
 Frame = +1

Query: 91  HMLRGNRNKKKSKNPRTRRKVRAT 162
           H ++GN  KK++K+ +TR+K R++
Sbjct: 192 HEVQGNVTKKRTKHSKTRQKARSS 215


>Z83119-5|CAB05582.3| 1364|Caenorhabditis elegans Hypothetical
           protein R05H10.6 protein.
          Length = 1364

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
 Frame = +1

Query: 472 SMISLIIPPKDQISRVSKMLADEFG-TASNIKSRVNRLSVLGAITSV----QHRLKLYTK 636
           +MI++ I P+ + + V     + +  TA NI S +  +    A   V    + R+ LY K
Sbjct: 310 AMINVKIVPEVEKNVVFGFEKESYDITAENINSILGNIKAKSASPVVYRITEGRIDLY-K 368

Query: 637 VPPNGLVIYCGTIV 678
           V PNG ++Y G +V
Sbjct: 369 VEPNGDLVYTGKMV 382


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,938,905
Number of Sequences: 27780
Number of extensions: 328127
Number of successful extensions: 893
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 893
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)