Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30l22
(678 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78410-10|CAB01640.2| 337|Caenorhabditis elegans Hypothetical p... 29 3.0
Z49907-1|CAA90090.1| 417|Caenorhabditis elegans Hypothetical pr... 28 5.3
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 27 9.3
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 27 9.3
AF067945-8|ABQ13060.1| 255|Caenorhabditis elegans Mechanosensor... 27 9.3
AF067945-7|ABQ13059.1| 954|Caenorhabditis elegans Mechanosensor... 27 9.3
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 27 9.3
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 27 9.3
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 27 9.3
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 27 9.3
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 27 9.3
>Z78410-10|CAB01640.2| 337|Caenorhabditis elegans Hypothetical
protein C51E3.3 protein.
Length = 337
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -3
Query: 190 KRSNNP*H*SITVTCQSDSCHIASLAPF 107
KR +P + ITVTC +D+ HI+ PF
Sbjct: 38 KRFRSPCYILITVTCVADAIHISGQFPF 65
>Z49907-1|CAA90090.1| 417|Caenorhabditis elegans Hypothetical
protein B0491.1 protein.
Length = 417
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = -2
Query: 536 KRLFCLSDILEILQESHLKFKIWKKYLNEKKSSS 435
K LFC+ DIL + L FKI +K LNE KS +
Sbjct: 92 KILFCIFDILVAI----LYFKIMEKDLNETKSET 121
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 134 LSHCESGSVCMQGLRCMGRCKS*QC 60
L+ C++G+VC RC+ S QC
Sbjct: 14 LNECDNGAVCGPNARCVNEIGSFQC 38
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 134 LSHCESGSVCMQGLRCMGRCKS*QC 60
L+ C++G+VC RC+ S QC
Sbjct: 150 LNECDNGAVCGPNARCVNEIGSFQC 174
>AF067945-8|ABQ13060.1| 255|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform j protein.
Length = 255
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 134 LSHCESGSVCMQGLRCMGRCKS*QC 60
L+ C++G+VC RC+ S QC
Sbjct: 191 LNECDNGAVCGPNARCVNEIGSFQC 215
>AF067945-7|ABQ13059.1| 954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform i protein.
Length = 954
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 134 LSHCESGSVCMQGLRCMGRCKS*QC 60
L+ C++G+VC RC+ S QC
Sbjct: 199 LNECDNGAVCGPNARCVNEIGSFQC 223
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 134 LSHCESGSVCMQGLRCMGRCKS*QC 60
L+ C++G+VC RC+ S QC
Sbjct: 199 LNECDNGAVCGPNARCVNEIGSFQC 223
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 134 LSHCESGSVCMQGLRCMGRCKS*QC 60
L+ C++G+VC RC+ S QC
Sbjct: 199 LNECDNGAVCGPNARCVNEIGSFQC 223
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 134 LSHCESGSVCMQGLRCMGRCKS*QC 60
L+ C++G+VC RC+ S QC
Sbjct: 191 LNECDNGAVCGPNARCVNEIGSFQC 215
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 134 LSHCESGSVCMQGLRCMGRCKS*QC 60
L+ C++G+VC RC+ S QC
Sbjct: 203 LNECDNGAVCGPNARCVNEIGSFQC 227
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 134 LSHCESGSVCMQGLRCMGRCKS*QC 60
L+ C++G+VC RC+ S QC
Sbjct: 203 LNECDNGAVCGPNARCVNEIGSFQC 227
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,347,893
Number of Sequences: 27780
Number of extensions: 281699
Number of successful extensions: 627
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 627
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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