Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30l18
         (551 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z54342-16|CAA91156.1|  755|Caenorhabditis elegans Hypothetical p...    27   6.8  
Z47072-4|CAA87370.1|  755|Caenorhabditis elegans Hypothetical pr...    27   6.8  
U97407-4|AAB52482.3| 1272|Caenorhabditis elegans P-glycoprotein ...    27   6.8  
EF205592-1|ABM92304.1| 1272|Caenorhabditis elegans ABC transport...    27   6.8  
Z83232-1|CAB05755.3| 1764|Caenorhabditis elegans Hypothetical pr...    27   9.0  
AF024494-9|AAB70333.1|  336|Caenorhabditis elegans Serpentine re...    27   9.0  
AB162421-1|BAD36749.1| 1766|Caenorhabditis elegans plexin protein.     27   9.0  

>Z54342-16|CAA91156.1|  755|Caenorhabditis elegans Hypothetical
           protein F26C11.1 protein.
          Length = 755

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = +3

Query: 279 IVRMRVCVKYMNEVSYGTMRRRTLTGEKRP*RK 377
           +V+ R+C K   +++YGT R+R +  +KR  RK
Sbjct: 214 LVKARLCPKCSEKLNYGT-RKRQVVQKKRAVRK 245


>Z47072-4|CAA87370.1|  755|Caenorhabditis elegans Hypothetical
           protein F26C11.1 protein.
          Length = 755

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = +3

Query: 279 IVRMRVCVKYMNEVSYGTMRRRTLTGEKRP*RK 377
           +V+ R+C K   +++YGT R+R +  +KR  RK
Sbjct: 214 LVKARLCPKCSEKLNYGT-RKRQVVQKKRAVRK 245


>U97407-4|AAB52482.3| 1272|Caenorhabditis elegans P-glycoprotein
           related protein 2 protein.
          Length = 1272

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -1

Query: 248 FSIE*IKYCLSLLIFSYSIALAKFVIIVCVQTY 150
           F+ E +KYC+  L+    +    +V I C ++Y
Sbjct: 113 FNSEVVKYCIYYLVLGVLMFFTSYVQIACFESY 145


>EF205592-1|ABM92304.1| 1272|Caenorhabditis elegans ABC transporter
           PGP-2 protein.
          Length = 1272

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -1

Query: 248 FSIE*IKYCLSLLIFSYSIALAKFVIIVCVQTY 150
           F+ E +KYC+  L+    +    +V I C ++Y
Sbjct: 113 FNSEVVKYCIYYLVLGVLMFFTSYVQIACFESY 145


>Z83232-1|CAB05755.3| 1764|Caenorhabditis elegans Hypothetical protein
            K04B12.1 protein.
          Length = 1764

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = -3

Query: 168  SMCTNLQFQLIIVNFDYCETSSLDIIKSH 82
            SM  +L   +++ NF YC    +D++++H
Sbjct: 1258 SMLASLLISVLLRNFSYCTEVVVDLLRAH 1286


>AF024494-9|AAB70333.1|  336|Caenorhabditis elegans Serpentine
           receptor, class u protein27 protein.
          Length = 336

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = +2

Query: 407 KNNIFLLYNNIFYKS 451
           KNN FLL+NN+F+ S
Sbjct: 204 KNNYFLLFNNLFWLS 218


>AB162421-1|BAD36749.1| 1766|Caenorhabditis elegans plexin protein.
          Length = 1766

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = -3

Query: 168  SMCTNLQFQLIIVNFDYCETSSLDIIKSH 82
            SM  +L   +++ NF YC    +D++++H
Sbjct: 1260 SMLASLLISVLLRNFSYCTEVVVDLLRAH 1288


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,518,593
Number of Sequences: 27780
Number of extensions: 199399
Number of successful extensions: 328
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 328
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)