Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30l17
         (638 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089452-1|AAL90190.1|  708|Drosophila melanogaster AT26759p pro...    30   3.0  
AY060948-1|AAL28496.1|  784|Drosophila melanogaster GM08606p pro...    30   3.0  
AE013599-3826|AAF47171.1|  784|Drosophila melanogaster CG4065-PA...    30   3.0  
AE013599-3825|AAX52681.1|  783|Drosophila melanogaster CG4065-PB...    30   3.0  
AE014298-3209|ABI31002.1|  854|Drosophila melanogaster CG41480-P...    29   5.3  

>AY089452-1|AAL90190.1|  708|Drosophila melanogaster AT26759p
           protein.
          Length = 708

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
 Frame = -3

Query: 141 VKHSTYH---LLY---AGALKFLLKQFITEIIDIYSFIILYNYVLEYLIG 10
           +KHST+    +LY      L FL+  F  E+  ++ F+ +Y Y  E+LIG
Sbjct: 532 LKHSTHFSTWVLYNCFRAMLIFLMSGFELELYAVHEFLYIYWYPYEFLIG 581


>AY060948-1|AAL28496.1|  784|Drosophila melanogaster GM08606p
           protein.
          Length = 784

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
 Frame = -3

Query: 141 VKHSTYH---LLY---AGALKFLLKQFITEIIDIYSFIILYNYVLEYLIG 10
           +KHST+    +LY      L FL+  F  E+  ++ F+ +Y Y  E+LIG
Sbjct: 533 LKHSTHFSTWVLYNCFRAMLIFLMSGFELELYAVHEFLYIYWYPYEFLIG 582


>AE013599-3826|AAF47171.1|  784|Drosophila melanogaster CG4065-PA,
           isoform A protein.
          Length = 784

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
 Frame = -3

Query: 141 VKHSTYH---LLY---AGALKFLLKQFITEIIDIYSFIILYNYVLEYLIG 10
           +KHST+    +LY      L FL+  F  E+  ++ F+ +Y Y  E+LIG
Sbjct: 533 LKHSTHFSTWVLYNCFRAMLIFLMSGFELELYAVHEFLYIYWYPYEFLIG 582


>AE013599-3825|AAX52681.1|  783|Drosophila melanogaster CG4065-PB,
           isoform B protein.
          Length = 783

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
 Frame = -3

Query: 141 VKHSTYH---LLY---AGALKFLLKQFITEIIDIYSFIILYNYVLEYLIG 10
           +KHST+    +LY      L FL+  F  E+  ++ F+ +Y Y  E+LIG
Sbjct: 532 LKHSTHFSTWVLYNCFRAMLIFLMSGFELELYAVHEFLYIYWYPYEFLIG 581


>AE014298-3209|ABI31002.1|  854|Drosophila melanogaster CG41480-PA
           protein.
          Length = 854

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 528 LRHC*KGYKWNEIIKSIYVH 587
           LRHC K Y W     S+Y+H
Sbjct: 472 LRHCEKAYGWKRSSHSLYIH 491


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,652,026
Number of Sequences: 53049
Number of extensions: 573019
Number of successful extensions: 1329
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1329
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)