Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30l17
         (638 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067945-13|AAC17676.2|  308|Caenorhabditis elegans Serpentine r...    30   1.2  
U70870-1|AAB51198.1| 1404|Caenorhabditis elegans CELF35-1 protein.     27   8.6  
U40934-5|AAA81683.2| 1404|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>AF067945-13|AAC17676.2|  308|Caenorhabditis elegans Serpentine
           receptor, class x protein59 protein.
          Length = 308

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = -3

Query: 135 HSTYHLLYAGALKFLLKQFITEIIDIYSFIILYNYVLEYLI 13
           HST+ +LY   +     +F+TE  +   FI+L++Y L   I
Sbjct: 55  HSTFFMLYFCPMVITGSEFLTEYSEHCGFILLFSYELSVQI 95


>U70870-1|AAB51198.1| 1404|Caenorhabditis elegans CELF35-1 protein.
          Length = 1404

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 294 YEAACVHRTSNCTHALMATL 353
           YE  C H +S CT  +M TL
Sbjct: 400 YEKTCSHASSECTELIMETL 419


>U40934-5|AAA81683.2| 1404|Caenorhabditis elegans Hypothetical
           protein F35H10.10 protein.
          Length = 1404

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 294 YEAACVHRTSNCTHALMATL 353
           YE  C H +S CT  +M TL
Sbjct: 400 YEKTCSHASSECTELIMETL 419


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,721,777
Number of Sequences: 27780
Number of extensions: 312114
Number of successful extensions: 776
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)