Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30l14
(696 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0638 - 30768546-30768779,30768908-30769017,30769301-307694... 125 6e-34
01_01_0336 + 2712412-2712576,2713663-2713738,2713840-2713898,271... 57 1e-08
08_02_1226 + 25394106-25394168,25394243-25394396,25394548-253946... 56 2e-08
04_04_0818 + 28309950-28311344 31 1.2
02_01_0317 - 2128660-2128776,2129281-2129364,2129463-2129543,213... 31 1.2
12_01_0798 + 7314885-7314953,7315324-7315387,7315489-7315677,731... 30 1.5
09_04_0341 + 16820890-16820993,16821082-16821269,16821412-16821416 30 1.5
04_04_0816 + 28288407-28289801 29 2.7
07_03_1569 - 27792739-27794175 29 4.7
06_01_0394 - 2835438-2835896,2836664-2836913,2837197-2837669,283... 28 6.2
04_03_0905 - 20722090-20722207,20722314-20722395,20722698-207228... 28 8.1
>01_06_0638 -
30768546-30768779,30768908-30769017,30769301-30769490,
30769842-30769914,30770007-30770063,30770147-30770211,
30770278-30770488,30770568-30770650,30771123-30771158,
30771611-30771713,30771813-30771899,30772210-30772403
Length = 480
Score = 125 bits (302), Expect(2) = 6e-34
Identities = 61/144 (42%), Positives = 93/144 (64%), Gaps = 1/144 (0%)
Frame = +1
Query: 139 VEKTILKLYKEFEKNSSIDPDLPL-LIKEVHSKLLKKCLINLPKSYECLDASRTWIIYWI 315
VE + ++Y+ N+ L L L +E H + L + L +L S+ LDA+R W+ YWI
Sbjct: 43 VEAKVGEIYRVLFGNAPNANSLMLELWREQHVEYLTRGLKHLGPSFHVLDANRPWLCYWI 102
Query: 316 LHSLWILNDMPDHETLSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDE 495
+H+L +L+++PD + +V FL +CQ +DGGYGGGP Q PHL TTYAAVN L IG++
Sbjct: 103 IHALALLDEIPD-DVEDDIVDFLSRCQDKDGGYGGGPGQLPHLATTYAAVNTLVTIGSER 161
Query: 496 AYDSIDRSSLQRFLWTVRDVDGSF 567
A S++R +L +F+ ++D G+F
Sbjct: 162 ALSSVNRDNLYKFMLRMKDTSGAF 185
Score = 36.7 bits (81), Expect(2) = 6e-34
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +1
Query: 571 LHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEWIVSCQT 696
+H GE D+R +Y AIS+A + N L +I CQT
Sbjct: 222 MHDGGEIDVRASYTAISVASLVNILDGELAKGVGNYITRCQT 263
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +1
Query: 349 DHETLSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSL 525
D E V ++ +CQ +GG G P H G T+ + + ++ D +D +SL
Sbjct: 247 DGELAKGVGNYITRCQTYEGGIAGEPYAEAHGGYTFCGLATMILL---NEVDKLDLASL 302
>01_01_0336 +
2712412-2712576,2713663-2713738,2713840-2713898,
2714009-2714148,2714690-2714745,2714832-2714908,
2715007-2715075
Length = 213
Score = 57.2 bits (132), Expect = 1e-08
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 25/193 (12%)
Frame = +1
Query: 193 DPDLPLLIKEVHSKLLKKCLINLPKSYECLDASRTWIIYWILHSLWILNDMPDHETLSAV 372
+P+ P +E H L+ LP Y + + + Y+ + L +L ++ D +
Sbjct: 3 EPEQPEFARERHVLFLEAMASELPADYASQEVNHLTLAYFAVAGLSLLREL-DSVNKDQI 61
Query: 373 VKFLDQCQ-H-------EDGGYGG--GPR--QYP------------HLGTTYAAVNALSI 480
K++ Q H ++G + G G R Q+P HL +TY+A+ L I
Sbjct: 62 AKWILSFQVHPKTDNELDNGQFYGFCGSRTTQFPSTNMKDPCHNGSHLASTYSALAILKI 121
Query: 481 IGTDEAYDSIDRSSLQRFLWTVRDVDGSFA-LHKDGEQDIRGAYCAISIAKMTNTYTEAL 657
+G D A +ID L + ++ DGSF H E D+R YCA +I M +T
Sbjct: 122 VGYDLA--NIDNKVLLSSMRNLQQPDGSFMPTHIGAETDLRFVYCAAAICSMLKDWTGMD 179
Query: 658 FDKTAEWIVSCQT 696
+K ++I+SCQ+
Sbjct: 180 KEKAKQYILSCQS 192
>08_02_1226 +
25394106-25394168,25394243-25394396,25394548-25394664,
25395541-25395607,25395701-25395828,25396327-25396460,
25396552-25396650,25396780-25396902
Length = 294
Score = 56.4 bits (130), Expect = 2e-08
Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 1/130 (0%)
Frame = +1
Query: 307 YWILHSLWILNDMPDHETLSAVVKFLDQCQH-EDGGYGGGPRQYPHLGTTYAAVNALSII 483
YW L +L +L+ + E V++++ C H E GG+GG H+ T +AV L +
Sbjct: 40 YWGLTTLDLLHKLRAVEA-DEVIEWIMSCYHPESGGFGGNVGHDAHVLYTLSAVQVLCLF 98
Query: 484 GTDEAYDSIDRSSLQRFLWTVRDVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFD 663
+ D++D + ++ +++ DGSF+ GE D R +Y AI + + +
Sbjct: 99 ---DRLDALDVDKVADYIAGLQNEDGSFSGDIWGEVDTRFSYIAICTLSLLHRLEKINVQ 155
Query: 664 KTAEWIVSCQ 693
K ++IVSC+
Sbjct: 156 KAVDYIVSCK 165
>04_04_0818 + 28309950-28311344
Length = 464
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +1
Query: 514 RSSLQRFLWTVRDVDGSFALHKDGEQDIRGAYCAISIAKMT 636
R S QRF+W +RD D GE + R A +K T
Sbjct: 296 RGSKQRFIWVMRDADRGNIFTDTGEGETRHAKLLSEFSKQT 336
>02_01_0317 -
2128660-2128776,2129281-2129364,2129463-2129543,
2130230-2130407,2130530-2130673,2130780-2130826,
2131149-2131205,2131989-2132087,2132301-2132423,
2132514-2132636,2132859-2132972,2133612-2133800,
2134408-2134574,2134707-2134791,2134891-2135085,
2135162-2135251,2135418-2135603,2135885-2135959,
2136757-2136957
Length = 784
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 3/99 (3%)
Frame = +1
Query: 397 HEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQRFLWTVRDVDGSFALH 576
H G YGG P L T AL+ A S + ++R+L+ ++ DG + LH
Sbjct: 139 HWPGDYGGPMFLMPGLIITLYVSGALNT-----ALSSEHQKEIRRYLYNHQNEDGGWGLH 193
Query: 577 KDGEQDIRGA---YCAISIAKMTNTYTEALFDKTAEWIV 684
+G + G+ Y ++ + + +K +WI+
Sbjct: 194 IEGHSTMFGSALTYVSLRLLGEGPDSGDGAMEKGRKWIL 232
>12_01_0798 + 7314885-7314953,7315324-7315387,7315489-7315677,
7316430-7316625,7316727-7316953,7317177-7318134,
7320104-7321307,7321517-7321876,7321965-7323195,
7323334-7323599,7323738-7326335
Length = 2453
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 178 KNSSIDPDLPLLIKEVHSKLLKKCLINLPKS 270
+N S+DP PL + E++S L CL +L KS
Sbjct: 1947 ENESVDPSNPLDLLELYSATLDDCLSDLIKS 1977
>09_04_0341 + 16820890-16820993,16821082-16821269,16821412-16821416
Length = 98
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 298 WIIYWILHSLWILNDMPDHETL 363
W++YWIL+SL L +M H+ L
Sbjct: 12 WLVYWILYSLITLMEMALHKVL 33
>04_04_0816 + 28288407-28289801
Length = 464
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +1
Query: 514 RSSLQRFLWTVRDVDGSFALHKDGEQDIRGAYCAISIAKMT 636
R S QRF+W +RD D GE + R A K T
Sbjct: 296 RGSKQRFIWVLRDADRGNIFAGSGESESRYAKLLSEFCKET 336
>07_03_1569 - 27792739-27794175
Length = 478
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 514 RSSLQRFLWTVRDVDGSFALHKDGEQDIRGAYCA 615
R S QRF+W +RD D + ++ E + GA A
Sbjct: 299 RGSGQRFIWALRDADRADMDTREAEAAVHGARLA 332
>06_01_0394 -
2835438-2835896,2836664-2836913,2837197-2837669,
2838941-2840608
Length = 949
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 397 HEDGGYGGGPRQYPHLGTTYAAVNA 471
+ED YGGG +PHL AV +
Sbjct: 168 YEDADYGGGAGVFPHLADALRAVGS 192
>04_03_0905 -
20722090-20722207,20722314-20722395,20722698-20722851,
20723026-20723089,20724282-20724404,20725326-20725452,
20725541-20726171
Length = 432
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Frame = +1
Query: 418 GGPRQYPHLGTT--YAAVNALSIIGTDEAYDSIDRSSLQRFLWTVRDVDGSFALHKDGEQ 591
GGP H+G YA V + IG D + + S + W V V G L G +
Sbjct: 309 GGPWSVDHIGVCFFYAFVKKIEEIGADYKFAFVFGSCVSLQFWLVAAVLGYPRLRAHGGK 368
Query: 592 D 594
D
Sbjct: 369 D 369
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,206,850
Number of Sequences: 37544
Number of extensions: 349408
Number of successful extensions: 923
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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