Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30l14
(696 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L10414-1|AAA86286.1| 387|Homo sapiens farnesyl-protein transfer... 194 3e-49
L00635-1|AAA35854.1| 437|Homo sapiens farnesyl-protein transfer... 194 3e-49
BC020232-1|AAH20232.1| 437|Homo sapiens farnesyltransferase, CA... 194 3e-49
Y08201-1|CAA69383.1| 331|Homo sapiens rab geranylgeranyl transf... 57 5e-08
X98001-1|CAA66638.1| 331|Homo sapiens geranylgeranyl transferas... 57 5e-08
CR456941-1|CAG33222.1| 331|Homo sapiens RABGGTB protein. 57 5e-08
BC020790-1|AAH20790.1| 331|Homo sapiens Rab geranylgeranyltrans... 57 5e-08
AL357314-5|CAI22393.1| 331|Homo sapiens Rab geranylgeranyltrans... 57 5e-08
AB209023-1|BAD92260.1| 320|Homo sapiens Rab geranylgeranyltrans... 57 5e-08
U49245-1|AAA91473.1| 331|Homo sapiens geranylgeranyl transferas... 57 7e-08
L25441-1|AAA35888.1| 377|Homo sapiens geranylgeranyltransferase... 44 5e-04
AY780790-1|AAV98360.1| 300|Homo sapiens geranylgeranyltransfera... 40 0.006
AL357314-4|CAI22392.1| 152|Homo sapiens Rab geranylgeranyltrans... 40 0.006
>L10414-1|AAA86286.1| 387|Homo sapiens farnesyl-protein transferase
beta-subunit protein.
Length = 387
Score = 194 bits (473), Expect = 3e-49
Identities = 93/185 (50%), Positives = 126/185 (68%)
Frame = +1
Query: 139 VEKTILKLYKEFEKNSSIDPDLPLLIKEVHSKLLKKCLINLPKSYECLDASRTWIIYWIL 318
VE+ I +++ ++ N + P L +L +E H LK+ L L +YECLDASR W+ YWIL
Sbjct: 1 VEEKIQEVFSSYKFNHLV-PRL-VLQREKHFHYLKRGLRQLTDAYECLDASRPWLCYWIL 58
Query: 319 HSLWILNDMPDHETLSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEA 498
HSL +L++ + V +FL+ CQ +GG+GGGP QYPHL TYAAVNAL IIGT+EA
Sbjct: 59 HSLELLDEPIPQIVATDVCQFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEA 118
Query: 499 YDSIDRSSLQRFLWTVRDVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEW 678
YD I+R L ++L++++ DGSF +H GE D+R AYCA S+A +TN T LF+ TAEW
Sbjct: 119 YDIINREKLLQYLYSLKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEW 178
Query: 679 IVSCQ 693
I CQ
Sbjct: 179 IARCQ 183
Score = 31.1 bits (67), Expect = 3.9
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 355 ETLSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSII 483
+ +++ +CQ+ +GG GG P H G T+ + AL I+
Sbjct: 170 DLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTFCGLAALVIL 212
>L00635-1|AAA35854.1| 437|Homo sapiens farnesyl-protein transferase
beta-subunit protein.
Length = 437
Score = 194 bits (473), Expect = 3e-49
Identities = 93/185 (50%), Positives = 126/185 (68%)
Frame = +1
Query: 139 VEKTILKLYKEFEKNSSIDPDLPLLIKEVHSKLLKKCLINLPKSYECLDASRTWIIYWIL 318
VE+ I +++ ++ N + P L +L +E H LK+ L L +YECLDASR W+ YWIL
Sbjct: 51 VEEKIQEVFSSYKFNHLV-PRL-VLQREKHFHYLKRGLRQLTDAYECLDASRPWLCYWIL 108
Query: 319 HSLWILNDMPDHETLSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEA 498
HSL +L++ + V +FL+ CQ +GG+GGGP QYPHL TYAAVNAL IIGT+EA
Sbjct: 109 HSLELLDEPIPQIVATDVCQFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEA 168
Query: 499 YDSIDRSSLQRFLWTVRDVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEW 678
YD I+R L ++L++++ DGSF +H GE D+R AYCA S+A +TN T LF+ TAEW
Sbjct: 169 YDIINREKLLQYLYSLKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEW 228
Query: 679 IVSCQ 693
I CQ
Sbjct: 229 IARCQ 233
Score = 31.1 bits (67), Expect = 3.9
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 355 ETLSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSII 483
+ +++ +CQ+ +GG GG P H G T+ + AL I+
Sbjct: 220 DLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTFCGLAALVIL 262
>BC020232-1|AAH20232.1| 437|Homo sapiens farnesyltransferase, CAAX
box, beta protein.
Length = 437
Score = 194 bits (473), Expect = 3e-49
Identities = 93/185 (50%), Positives = 126/185 (68%)
Frame = +1
Query: 139 VEKTILKLYKEFEKNSSIDPDLPLLIKEVHSKLLKKCLINLPKSYECLDASRTWIIYWIL 318
VE+ I +++ ++ N + P L +L +E H LK+ L L +YECLDASR W+ YWIL
Sbjct: 51 VEEKIQEVFSSYKFNHLV-PRL-VLQREKHFHYLKRGLRQLTDAYECLDASRPWLCYWIL 108
Query: 319 HSLWILNDMPDHETLSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEA 498
HSL +L++ + V +FL+ CQ +GG+GGGP QYPHL TYAAVNAL IIGT+EA
Sbjct: 109 HSLELLDEPIPQIVATDVCQFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEA 168
Query: 499 YDSIDRSSLQRFLWTVRDVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEW 678
YD I+R L ++L++++ DGSF +H GE D+R AYCA S+A +TN T LF+ TAEW
Sbjct: 169 YDIINREKLLQYLYSLKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEW 228
Query: 679 IVSCQ 693
I CQ
Sbjct: 229 IARCQ 233
Score = 31.1 bits (67), Expect = 3.9
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 355 ETLSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSII 483
+ +++ +CQ+ +GG GG P H G T+ + AL I+
Sbjct: 220 DLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTFCGLAALVIL 262
>Y08201-1|CAA69383.1| 331|Homo sapiens rab geranylgeranyl
transferase protein.
Length = 331
Score = 57.2 bits (132), Expect = 5e-08
Identities = 35/129 (27%), Positives = 63/129 (48%)
Frame = +1
Query: 304 IYWILHSLWILNDMPDHETLSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSII 483
IYW L + ++ + ++ F+ CQHE GG PHL T +AV L++
Sbjct: 50 IYWGLTVMDLMGQL-HRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLY 108
Query: 484 GTDEAYDSIDRSSLQRFLWTVRDVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFD 663
++ + ID + + ++ ++ DGSFA GE D R ++CA++ + +
Sbjct: 109 ---DSINVIDVNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVE 165
Query: 664 KTAEWIVSC 690
K E+++SC
Sbjct: 166 KAIEFVLSC 174
Score = 35.5 bits (78), Expect = 0.18
Identities = 24/111 (21%), Positives = 44/111 (39%)
Frame = +1
Query: 361 LSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQRFLW 540
++ VV+++ Q EDG + G ++ AV L+++G D+I+ F+
Sbjct: 116 VNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGK---LDAINVEKAIEFVL 172
Query: 541 TVRDVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEWIVSCQ 693
+ + DG F E YC +T+ + D W+ Q
Sbjct: 173 SCMNSDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVTSDLLGWWLCERQ 223
Score = 31.1 bits (67), Expect = 3.9
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +1
Query: 349 DHETLSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSI 480
D + ++F+ C + DGG+G P H G Y L+I
Sbjct: 160 DAINVEKAIEFVLSCMNSDGGFGCRPGSESHAGQIYCCTGFLAI 203
>X98001-1|CAA66638.1| 331|Homo sapiens geranylgeranyl transferase
II protein.
Length = 331
Score = 57.2 bits (132), Expect = 5e-08
Identities = 35/129 (27%), Positives = 63/129 (48%)
Frame = +1
Query: 304 IYWILHSLWILNDMPDHETLSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSII 483
IYW L + ++ + ++ F+ CQHE GG PHL T +AV L++
Sbjct: 50 IYWGLTVMDLMGQL-HRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLY 108
Query: 484 GTDEAYDSIDRSSLQRFLWTVRDVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFD 663
++ + ID + + ++ ++ DGSFA GE D R ++CA++ + +
Sbjct: 109 ---DSINVIDVNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVE 165
Query: 664 KTAEWIVSC 690
K E+++SC
Sbjct: 166 KAIEFVLSC 174
Score = 35.1 bits (77), Expect = 0.24
Identities = 24/111 (21%), Positives = 44/111 (39%)
Frame = +1
Query: 361 LSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQRFLW 540
++ VV+++ Q EDG + G ++ AV L+++G D+I+ F+
Sbjct: 116 VNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGK---LDAINVEKAIEFVL 172
Query: 541 TVRDVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEWIVSCQ 693
+ + DG F E YC +T+ + D W+ Q
Sbjct: 173 SCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQ 223
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +1
Query: 349 DHETLSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSI 480
D + ++F+ C + DGG+G P H G Y L+I
Sbjct: 160 DAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAI 203
>CR456941-1|CAG33222.1| 331|Homo sapiens RABGGTB protein.
Length = 331
Score = 57.2 bits (132), Expect = 5e-08
Identities = 35/129 (27%), Positives = 63/129 (48%)
Frame = +1
Query: 304 IYWILHSLWILNDMPDHETLSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSII 483
IYW L + ++ + ++ F+ CQHE GG PHL T +AV L++
Sbjct: 50 IYWGLTVMDLMGQL-HRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLY 108
Query: 484 GTDEAYDSIDRSSLQRFLWTVRDVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFD 663
++ + ID + + ++ ++ DGSFA GE D R ++CA++ + +
Sbjct: 109 ---DSINVIDVNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVE 165
Query: 664 KTAEWIVSC 690
K E+++SC
Sbjct: 166 KAIEFVLSC 174
Score = 35.1 bits (77), Expect = 0.24
Identities = 24/111 (21%), Positives = 44/111 (39%)
Frame = +1
Query: 361 LSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQRFLW 540
++ VV+++ Q EDG + G ++ AV L+++G D+I+ F+
Sbjct: 116 VNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGK---LDAINVEKAIEFVL 172
Query: 541 TVRDVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEWIVSCQ 693
+ + DG F E YC +T+ + D W+ Q
Sbjct: 173 SCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQ 223
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +1
Query: 349 DHETLSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSI 480
D + ++F+ C + DGG+G P H G Y L+I
Sbjct: 160 DAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAI 203
>BC020790-1|AAH20790.1| 331|Homo sapiens Rab
geranylgeranyltransferase, beta subunit protein.
Length = 331
Score = 57.2 bits (132), Expect = 5e-08
Identities = 35/129 (27%), Positives = 63/129 (48%)
Frame = +1
Query: 304 IYWILHSLWILNDMPDHETLSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSII 483
IYW L + ++ + ++ F+ CQHE GG PHL T +AV L++
Sbjct: 50 IYWGLTVMDLMGQL-HRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLY 108
Query: 484 GTDEAYDSIDRSSLQRFLWTVRDVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFD 663
++ + ID + + ++ ++ DGSFA GE D R ++CA++ + +
Sbjct: 109 ---DSINVIDVNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVE 165
Query: 664 KTAEWIVSC 690
K E+++SC
Sbjct: 166 KAIEFVLSC 174
Score = 35.1 bits (77), Expect = 0.24
Identities = 24/111 (21%), Positives = 44/111 (39%)
Frame = +1
Query: 361 LSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQRFLW 540
++ VV+++ Q EDG + G ++ AV L+++G D+I+ F+
Sbjct: 116 VNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGK---LDAINVEKAIEFVL 172
Query: 541 TVRDVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEWIVSCQ 693
+ + DG F E YC +T+ + D W+ Q
Sbjct: 173 SCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQ 223
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +1
Query: 349 DHETLSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSI 480
D + ++F+ C + DGG+G P H G Y L+I
Sbjct: 160 DAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAI 203
>AL357314-5|CAI22393.1| 331|Homo sapiens Rab
geranylgeranyltransferase, beta subunit protein.
Length = 331
Score = 57.2 bits (132), Expect = 5e-08
Identities = 35/129 (27%), Positives = 63/129 (48%)
Frame = +1
Query: 304 IYWILHSLWILNDMPDHETLSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSII 483
IYW L + ++ + ++ F+ CQHE GG PHL T +AV L++
Sbjct: 50 IYWGLTVMDLMGQL-HRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLY 108
Query: 484 GTDEAYDSIDRSSLQRFLWTVRDVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFD 663
++ + ID + + ++ ++ DGSFA GE D R ++CA++ + +
Sbjct: 109 ---DSINVIDVNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVE 165
Query: 664 KTAEWIVSC 690
K E+++SC
Sbjct: 166 KAIEFVLSC 174
Score = 35.1 bits (77), Expect = 0.24
Identities = 24/111 (21%), Positives = 44/111 (39%)
Frame = +1
Query: 361 LSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQRFLW 540
++ VV+++ Q EDG + G ++ AV L+++G D+I+ F+
Sbjct: 116 VNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGK---LDAINVEKAIEFVL 172
Query: 541 TVRDVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEWIVSCQ 693
+ + DG F E YC +T+ + D W+ Q
Sbjct: 173 SCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQ 223
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +1
Query: 349 DHETLSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSI 480
D + ++F+ C + DGG+G P H G Y L+I
Sbjct: 160 DAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAI 203
>AB209023-1|BAD92260.1| 320|Homo sapiens Rab
geranylgeranyltransferase, beta subunit variant protein.
Length = 320
Score = 57.2 bits (132), Expect = 5e-08
Identities = 35/129 (27%), Positives = 63/129 (48%)
Frame = +1
Query: 304 IYWILHSLWILNDMPDHETLSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSII 483
IYW L + ++ + ++ F+ CQHE GG PHL T +AV L++
Sbjct: 50 IYWGLTVMDLMGQL-HRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLY 108
Query: 484 GTDEAYDSIDRSSLQRFLWTVRDVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFD 663
++ + ID + + ++ ++ DGSFA GE D R ++CA++ + +
Sbjct: 109 ---DSINVIDVNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVE 165
Query: 664 KTAEWIVSC 690
K E+++SC
Sbjct: 166 KAIEFVLSC 174
Score = 35.1 bits (77), Expect = 0.24
Identities = 24/111 (21%), Positives = 44/111 (39%)
Frame = +1
Query: 361 LSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQRFLW 540
++ VV+++ Q EDG + G ++ AV L+++G D+I+ F+
Sbjct: 116 VNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGK---LDAINVEKAIEFVL 172
Query: 541 TVRDVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEWIVSCQ 693
+ + DG F E YC +T+ + D W+ Q
Sbjct: 173 SCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQ 223
Score = 30.7 bits (66), Expect = 5.2
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Frame = +1
Query: 379 FLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQRFLWTVRDVD 558
+L + Q GG G P + P + ++ + +L IIG IDR L+ F+ +D +
Sbjct: 218 WLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIG---RLHWIDREKLRNFILACQDEE 274
Query: 559 -GSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFDK 666
G FA I Y ++ T TE+L +
Sbjct: 275 TGGFADRPGDMHFIYQNYPKKELSSNKETLTESLLPR 311
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +1
Query: 349 DHETLSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSI 480
D + ++F+ C + DGG+G P H G Y L+I
Sbjct: 160 DAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAI 203
>U49245-1|AAA91473.1| 331|Homo sapiens geranylgeranyl transferase
type II beta-subunit protein.
Length = 331
Score = 56.8 bits (131), Expect = 7e-08
Identities = 35/129 (27%), Positives = 63/129 (48%)
Frame = +1
Query: 304 IYWILHSLWILNDMPDHETLSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSII 483
IYW L + ++ + ++ F+ CQHE GG PHL T +AV L++
Sbjct: 50 IYWGLTVMDLMGQL-HRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLY 108
Query: 484 GTDEAYDSIDRSSLQRFLWTVRDVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFD 663
++ + ID + + ++ ++ DGSFA GE D R ++CA++ + +
Sbjct: 109 ---DSINVIDVNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATFALLGKLDAINVE 165
Query: 664 KTAEWIVSC 690
K E+++SC
Sbjct: 166 KAIEFVLSC 174
Score = 33.5 bits (73), Expect = 0.74
Identities = 23/111 (20%), Positives = 43/111 (38%)
Frame = +1
Query: 361 LSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQRFLW 540
++ VV+++ Q EDG + G ++ AV +++G D+I+ F+
Sbjct: 116 VNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATFALLGK---LDAINVEKAIEFVL 172
Query: 541 TVRDVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEWIVSCQ 693
+ + DG F E YC +T+ + D W+ Q
Sbjct: 173 SCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQ 223
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +1
Query: 349 DHETLSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSI 480
D + ++F+ C + DGG+G P H G Y L+I
Sbjct: 160 DAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAI 203
>L25441-1|AAA35888.1| 377|Homo sapiens geranylgeranyltransferase
type I beta-subunit protein.
Length = 377
Score = 44.0 bits (99), Expect = 5e-04
Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 27/183 (14%)
Frame = +1
Query: 214 IKEVHSKLLKKCLINLPKSYECLDASRTWIIYWILHSLWILNDMPDHETLSAVVKF---- 381
+++ H + ++CL LP+ Y L+ SR I ++ L L +L+ + D ++++
Sbjct: 21 LRDRHVRFFQRCLQVLPERYSSLETSRLTIAFFALSGLDMLDSL-DVVNKDDIIEWIYSL 79
Query: 382 ----------LDQCQHEDGGYGG---GPRQYP---------HLGTTYAAVNALSIIGTDE 495
L++C Y G P + P H+ TY ++ L I+G D
Sbjct: 80 QVLPTEDRSNLNRCGFRGSSYLGIPFNPSKAPGTAHPYDSGHIAMTYTGLSCLVILGDD- 138
Query: 496 AYDSIDRSSLQRFLWTVRDVDGSFALHKDG-EQDIRGAYCAISIAKMTNTYTEALFDKTA 672
+++ + L ++ DGSF +G E D+R YCA I M N ++ K
Sbjct: 139 -LSRVNKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCASCICYMLNNWSGMDMKKAI 197
Query: 673 EWI 681
+I
Sbjct: 198 TYI 200
>AY780790-1|AAV98360.1| 300|Homo sapiens geranylgeranyltransferase
type I beta subunit protein.
Length = 300
Score = 40.3 bits (90), Expect = 0.006
Identities = 43/183 (23%), Positives = 78/183 (42%), Gaps = 27/183 (14%)
Frame = +1
Query: 214 IKEVHSKLLKKCLINLPKSYECLDASRTWIIYWILHSLWILNDMPDHETLSAVVKF---- 381
+++ H + ++CL LP+ Y L+ SR I ++ L L +L+ + D ++++
Sbjct: 21 LRDRHVRFFQRCLQVLPERYSSLETSRLTIAFFALSGLDMLDSL-DVVNKDDIIEWIYSL 79
Query: 382 ----------LDQCQHEDGGYGG---GPRQYP---------HLGTTYAAVNALSIIGTDE 495
L++C Y G P + P H+ T ++ L I+G D
Sbjct: 80 QVLPTEDRSNLNRCGFRGSSYLGIPFNPSKAPGTAHPYDSGHIAMTCTGLSCLVILGDD- 138
Query: 496 AYDSIDRSSLQRFLWTVRDVDGSFALHKDG-EQDIRGAYCAISIAKMTNTYTEALFDKTA 672
+++ + L ++ DGSF +G E D+R YCA I M N ++ K
Sbjct: 139 -LSRVNKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCASCICYMLNNWSGMDMKKAI 197
Query: 673 EWI 681
+I
Sbjct: 198 TYI 200
>AL357314-4|CAI22392.1| 152|Homo sapiens Rab
geranylgeranyltransferase, beta subunit protein.
Length = 152
Score = 40.3 bits (90), Expect = 0.006
Identities = 25/89 (28%), Positives = 44/89 (49%)
Frame = +1
Query: 304 IYWILHSLWILNDMPDHETLSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSII 483
IYW L + ++ + ++ F+ CQHE GG PHL T +AV L++
Sbjct: 50 IYWGLTVMDLMGQL-HRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLY 108
Query: 484 GTDEAYDSIDRSSLQRFLWTVRDVDGSFA 570
++ + ID + + ++ ++ DGSFA
Sbjct: 109 ---DSINVIDVNKVVEYVKGLQKEDGSFA 134
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,273,121
Number of Sequences: 237096
Number of extensions: 2043580
Number of successful extensions: 3598
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3590
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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