Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30l08
         (759 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    24   1.8  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   2.4  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   5.4  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    22   7.2  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   9.5  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   9.5  

>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +2

Query: 281 KYDKIFLDNKNLVKFIEKCFALENSDGMARIVN 379
           KYD + L    +V F   C A  +S G  +IVN
Sbjct: 406 KYDCVTLLFSGIVGFGAYCAAHTDSSGAVKIVN 438


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +2

Query: 281 KYDKIFLDNKNLVKFIEKCFALENSDGMARIVN 379
           KYD + L    +V F   C A  +S G  +IVN
Sbjct: 406 KYDCVTLLFSGIVGFGAYCAAHTDSSGAMKIVN 438


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +2

Query: 257 STRQTCDIKYDKIFLDNKNLVKFIEKCFALENSDG 361
           S +QT D       +  K  V  +E  +A+EN+ G
Sbjct: 95  SRKQTIDPLSSNTQITRKRRVGIVENQYAVENNTG 129


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 7/68 (10%)
 Frame = -1

Query: 390 NNVRLTILAIP-SEFSRAKHFSINFTKFLLSKNIL---SYFMSQ---VCLVLGCPTSSSK 232
           NN    I+ +  SE +    F + FT  LLS NIL    Y M+    V L +   T +  
Sbjct: 204 NNTEWEIVHMSHSESTIDSKFGLGFTTDLLSYNILLRRHYSMNSTTYVTLTIVLMTMTLM 263

Query: 231 TIMLNESS 208
           T+ L  SS
Sbjct: 264 TLWLEPSS 271


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = -1

Query: 414 GHVFWYKPNNVRLTILAIPSEFSRAKHFSINFTKF 310
           G  F ++     ++ILAI   +      S+NF  F
Sbjct: 167 GVYFAFRDQGACISILAIKVYYISCPEISVNFAHF 201


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -1

Query: 432 CELLYSGHVFWYKPNNVRLTILAIPS 355
           C++   G V W  P   RL  + I S
Sbjct: 345 CQMDSGGPVLWQNPRTKRLVNIGIIS 370


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,386
Number of Sequences: 438
Number of extensions: 3829
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)