Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30k17
         (714 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC004382-1|AAH04382.1|  127|Homo sapiens Unknown (protein for IM...    34   0.44 
L41840-1|AAC41758.1| 3224|Homo sapiens nucleoporin protein.            30   9.5  
D42063-1|BAA07662.1| 3224|Homo sapiens RanBP2 (Ran-binding prote...    30   9.5  
AC010095-2|AAY14984.1| 3224|Homo sapiens unknown protein.              30   9.5  
AB209483-1|BAD92720.1| 3138|Homo sapiens RAN binding protein 2 v...    30   9.5  

>BC004382-1|AAH04382.1|  127|Homo sapiens Unknown (protein for
           IMAGE:3640982) protein.
          Length = 127

 Score = 34.3 bits (75), Expect = 0.44
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +1

Query: 502 NSTPPPLVALTHASHIATRPPGCNHKDNPVDEIGE 606
           N  PPPL+  T  ++  TR PGCN +  P + + +
Sbjct: 18  NRQPPPLLTTTRYAYPVTRNPGCNQEKLPSESLSK 52


>L41840-1|AAC41758.1| 3224|Homo sapiens nucleoporin protein.
          Length = 3224

 Score = 29.9 bits (64), Expect = 9.5
 Identities = 19/71 (26%), Positives = 32/71 (45%)
 Frame = +2

Query: 434 LTSFGYQWANAAAVAGYNELLNQTVHHLH**L*RMLHISPPALPAAITRITLLTRLAK*K 613
           LT  G QW +  A+ G  + L Q  HHL     R+   +P ++      + LL  +    
Sbjct: 437 LTWLGLQWNSLPALPGIRKWLKQLFHHLPHETSRLETNAPESICILDLEVFLLGVVYTSH 496

Query: 614 NETKQTCSTRH 646
            + K+ C++ H
Sbjct: 497 LQLKEKCNSHH 507


>D42063-1|BAA07662.1| 3224|Homo sapiens RanBP2 (Ran-binding protein
           2) protein.
          Length = 3224

 Score = 29.9 bits (64), Expect = 9.5
 Identities = 19/71 (26%), Positives = 32/71 (45%)
 Frame = +2

Query: 434 LTSFGYQWANAAAVAGYNELLNQTVHHLH**L*RMLHISPPALPAAITRITLLTRLAK*K 613
           LT  G QW +  A+ G  + L Q  HHL     R+   +P ++      + LL  +    
Sbjct: 437 LTWLGLQWNSLPALPGIRKWLKQLFHHLPHETSRLETNAPESICILDLEVFLLGVVYTSH 496

Query: 614 NETKQTCSTRH 646
            + K+ C++ H
Sbjct: 497 LQLKEKCNSHH 507


>AC010095-2|AAY14984.1| 3224|Homo sapiens unknown protein.
          Length = 3224

 Score = 29.9 bits (64), Expect = 9.5
 Identities = 19/71 (26%), Positives = 32/71 (45%)
 Frame = +2

Query: 434 LTSFGYQWANAAAVAGYNELLNQTVHHLH**L*RMLHISPPALPAAITRITLLTRLAK*K 613
           LT  G QW +  A+ G  + L Q  HHL     R+   +P ++      + LL  +    
Sbjct: 437 LTWLGLQWNSLPALPGIRKWLKQLFHHLPHETSRLETNAPESICILDLEVFLLGVVYTSH 496

Query: 614 NETKQTCSTRH 646
            + K+ C++ H
Sbjct: 497 LQLKEKCNSHH 507


>AB209483-1|BAD92720.1| 3138|Homo sapiens RAN binding protein 2
           variant protein.
          Length = 3138

 Score = 29.9 bits (64), Expect = 9.5
 Identities = 19/71 (26%), Positives = 32/71 (45%)
 Frame = +2

Query: 434 LTSFGYQWANAAAVAGYNELLNQTVHHLH**L*RMLHISPPALPAAITRITLLTRLAK*K 613
           LT  G QW +  A+ G  + L Q  HHL     R+   +P ++      + LL  +    
Sbjct: 351 LTWLGLQWNSLPALPGIRKWLKQLFHHLPHETSRLETNAPESICILDLEVFLLGVVYTSH 410

Query: 614 NETKQTCSTRH 646
            + K+ C++ H
Sbjct: 411 LQLKEKCNSHH 421


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,346,907
Number of Sequences: 237096
Number of extensions: 1894006
Number of successful extensions: 3892
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3892
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8343197486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)