Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30k17
         (714 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50741-2|CAA90610.1|  383|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z81100-3|CAD92386.1|  333|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z81037-1|CAB02745.1|  819|Caenorhabditis elegans Hypothetical pr...    29   2.5  
U41263-7|AAC24431.1|  462|Caenorhabditis elegans Hypothetical pr...    29   3.3  
AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain, ...    29   3.3  
AF043700-6|AAB97569.2|  443|Caenorhabditis elegans Hypothetical ...    29   3.3  
U21319-5|AAL02454.1| 1100|Caenorhabditis elegans Hypothetical pr...    28   7.6  
U21319-4|AAL02455.1| 1097|Caenorhabditis elegans Hypothetical pr...    28   7.6  

>Z50741-2|CAA90610.1|  383|Caenorhabditis elegans Hypothetical
           protein F55G7.2 protein.
          Length = 383

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +1

Query: 571 NHKDNPVDEIGEIKERDETNMLHSTSS 651
           NH++N VD+I      DET++LH T S
Sbjct: 8   NHEENNVDKIESKMLEDETDLLHETLS 34


>Z81100-3|CAD92386.1|  333|Caenorhabditis elegans Hypothetical
           protein K08G2.9 protein.
          Length = 333

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 7/51 (13%)
 Frame = -3

Query: 565 REGGWRYVKHALEL---LMEVVYCLIQKFVVTRDGRCVRPLV----PETCE 434
           R+G WRYV++   +   ++ + YC+   F +  D    R LV    P+ CE
Sbjct: 123 RKGAWRYVRYPFLIANHILAIAYCISVYFDIPVDQEYSRRLVFQKFPQACE 173


>Z81037-1|CAB02745.1|  819|Caenorhabditis elegans Hypothetical
           protein C17E4.2 protein.
          Length = 819

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +1

Query: 196 QFYRTSISKIVQSRVTLKKNKTIIMKYYNRHKIIKL 303
           +FYR  I K+++    L+K    +   YN   I K+
Sbjct: 90  RFYRNEIKKVIEENEALRKENNNLKDTYNNENIAKI 125


>U41263-7|AAC24431.1|  462|Caenorhabditis elegans Hypothetical
           protein T19D12.9 protein.
          Length = 462

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 17/58 (29%), Positives = 24/58 (41%)
 Frame = -3

Query: 343 VIISCYCPNDTFEQVLLFYVDYNIS**LFCFSSMLPYFVLFSKLRYDKIVFENCKKTV 170
           +II   CPN T  +  +FY    I   +   +   P+F       Y K  +E  K TV
Sbjct: 401 IIIGFVCPNHTASEWAVFYTAVGIW--VIIMNVPFPFFATMDAAEYTKPEWEQKKNTV 456


>AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain,
            unconventional myosinprotein 7 protein.
          Length = 1887

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -2

Query: 545  CEACVRATNGGGVLFDSKVRCNPRRPLRSP 456
            C+ C    +    +F S + CNP  P+RSP
Sbjct: 1271 CQRCKMCLHKECFVFASSIPCNPTSPVRSP 1300


>AF043700-6|AAB97569.2|  443|Caenorhabditis elegans Hypothetical
           protein K09H9.2 protein.
          Length = 443

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = -3

Query: 316 DTFEQVLLFYVDYNIS**LFCFSSMLPYF--VLFSKLRYDKIVFENC 182
           DT ++ +L+  +Y     L+    + PYF  V  SK+ +DK V +NC
Sbjct: 384 DTIKERMLYLFEYRK---LWSMEQLRPYFKDVYKSKVAFDKYVVQNC 427


>U21319-5|AAL02454.1| 1100|Caenorhabditis elegans Hypothetical
           protein C30G12.6a protein.
          Length = 1100

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +2

Query: 299 NLFKSIVGAVTGNNNRSYKKFDLSIVG 379
           +LFK+I+ A+ GN N   ++  L ++G
Sbjct: 688 SLFKTIIPALLGNKNEELQQLGLELIG 714


>U21319-4|AAL02455.1| 1097|Caenorhabditis elegans Hypothetical
           protein C30G12.6b protein.
          Length = 1097

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +2

Query: 299 NLFKSIVGAVTGNNNRSYKKFDLSIVG 379
           +LFK+I+ A+ GN N   ++  L ++G
Sbjct: 688 SLFKTIIPALLGNKNEELQQLGLELIG 714


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,609,480
Number of Sequences: 27780
Number of extensions: 329110
Number of successful extensions: 942
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)