Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30k15
         (742 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46828-8|CAE17900.1|  166|Caenorhabditis elegans Hypothetical pr...    36   0.030
AL023832-3|CAE17976.1|  166|Caenorhabditis elegans Hypothetical ...    36   0.030
AF016438-3|AAQ62456.1|  173|Caenorhabditis elegans Hypothetical ...    31   0.65 
Z37140-2|CAA85502.1|  452|Caenorhabditis elegans Hypothetical pr...    29   4.6  
U41279-13|AAQ81281.1|   86|Caenorhabditis elegans Insulin relate...    28   6.0  
Z81536-4|CAB04364.1|  310|Caenorhabditis elegans Hypothetical pr...    28   8.0  

>Z46828-8|CAE17900.1|  166|Caenorhabditis elegans Hypothetical
           protein Y19D2B.2 protein.
          Length = 166

 Score = 35.9 bits (79), Expect = 0.030
 Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
 Frame = +3

Query: 315 RNLSITLVMSCGFPF-KLKCRLSR--VSDEGMFQKITQNLLKIINDLWTSQTILRNTLNK 485
           R   +  + +C FP+ K+  +L +  +S++G  Q  + + +  ++      ++ R  L +
Sbjct: 48  RTTKMFKIFACVFPYSKIPAKLQKDDISNQGFLQDQSNSSICELS-YHHVDSVSRKCLQE 106

Query: 486 KDKELTAYKTKFGEI---QHKHKKTEPFNDELHMNTHNMYETHFGE 614
           + ++L   K    EI   QHK K  E   D+    T N Y+ HF +
Sbjct: 107 RIQKLEQEKAALIEIMISQHKSKYEEKLKDKKEKRTSNYYKKHFNK 152


>AL023832-3|CAE17976.1|  166|Caenorhabditis elegans Hypothetical
           protein Y19D2B.2 protein.
          Length = 166

 Score = 35.9 bits (79), Expect = 0.030
 Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
 Frame = +3

Query: 315 RNLSITLVMSCGFPF-KLKCRLSR--VSDEGMFQKITQNLLKIINDLWTSQTILRNTLNK 485
           R   +  + +C FP+ K+  +L +  +S++G  Q  + + +  ++      ++ R  L +
Sbjct: 48  RTTKMFKIFACVFPYSKIPAKLQKDDISNQGFLQDQSNSSICELS-YHHVDSVSRKCLQE 106

Query: 486 KDKELTAYKTKFGEI---QHKHKKTEPFNDELHMNTHNMYETHFGE 614
           + ++L   K    EI   QHK K  E   D+    T N Y+ HF +
Sbjct: 107 RIQKLEQEKAALIEIMISQHKSKYEEKLKDKKEKRTSNYYKKHFNK 152


>AF016438-3|AAQ62456.1|  173|Caenorhabditis elegans Hypothetical
           protein F44C8.9b protein.
          Length = 173

 Score = 31.5 bits (68), Expect = 0.65
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -1

Query: 523 PNFVLYAVSSLSFLFKVFLNIV*LVHRSLIIFSRF*VIFWNIPS 392
           P F++      +  FK  +++  LVH++  IF    VIFW+ P+
Sbjct: 114 PEFIISFEPEKASPFKTVIDVTDLVHKAAEIFQEVKVIFWHKPT 157


>Z37140-2|CAA85502.1|  452|Caenorhabditis elegans Hypothetical
           protein ZK899.2 protein.
          Length = 452

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = -3

Query: 623 YWRFSEMGFIHVVSVHVKFIIEWFSFFVFVLNFTKLCF 510
           ++  + + F H      +F++ WF   V  LN   LC+
Sbjct: 62  FFLLAGLTFAHAWRSGTRFVLVWFGILVHALNVENLCY 99


>U41279-13|AAQ81281.1|   86|Caenorhabditis elegans Insulin related
           protein 12 protein.
          Length = 86

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = -2

Query: 633 YYGVLEILRNGFHTCCECSCEVHH*MVQFFCVCVEFHQTLFY 508
           Y G  E LRN    CC+ +CE+   M+    V   F   L +
Sbjct: 46  YRGYSEFLRNSATKCCQDNCEISE-MMALCVVAPNFDDDLLH 86


>Z81536-4|CAB04364.1|  310|Caenorhabditis elegans Hypothetical
           protein F40D4.5 protein.
          Length = 310

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -1

Query: 739 VGVIISCLIWIVCNSLSLEHSVFIGCLGNIIVFCK 635
           V VI+    W +C  L+ +  V IG  G ++VFCK
Sbjct: 210 VSVIVFIFSWYMC-MLANDLFVAIGITGPLLVFCK 243


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,198,620
Number of Sequences: 27780
Number of extensions: 376080
Number of successful extensions: 1200
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1197
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)