Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30k15
         (742 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    25   0.75 
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   4.0  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   9.2  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   9.2  

>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 25.0 bits (52), Expect = 0.75
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 578 HVKFIIEWFSFFVFVLNF 525
           H   IIEW SFF+ +  +
Sbjct: 403 HFAAIIEWLSFFIVIFTY 420


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -1

Query: 727 ISCLIWIVCNSLSLEHSVFIGCLGNIIVFCKI 632
           I C +W+  + LS   S+   C+ ++  FC I
Sbjct: 112 IMCDLWVSFDVLSCTASILNLCMISVDRFCAI 143


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 6/22 (27%), Positives = 15/22 (68%)
 Frame = +3

Query: 213 IEFENDSQLLQDGIKLLVQPEN 278
           +E + +  +L+DG+++ + P N
Sbjct: 115 LEVQLNLPILKDGVQIFIAPNN 136


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 6/22 (27%), Positives = 15/22 (68%)
 Frame = +3

Query: 213 IEFENDSQLLQDGIKLLVQPEN 278
           +E + +  +L+DG+++ + P N
Sbjct: 153 LEVQLNLPILKDGVQIFIAPNN 174


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,745
Number of Sequences: 438
Number of extensions: 4460
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)