Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30k14
         (582 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr...    33   0.15 
Z81586-3|CAB04691.1|  203|Caenorhabditis elegans Hypothetical pr...    31   0.60 
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso...    30   1.4  
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso...    30   1.4  
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso...    30   1.4  
AF098994-4|AAO21390.1|  606|Caenorhabditis elegans Hypothetical ...    29   2.4  
Z93374-2|CAB07553.2|  348|Caenorhabditis elegans Hypothetical pr...    27   7.4  
AL110487-14|CAB54432.1|  395|Caenorhabditis elegans Hypothetical...    27   7.4  
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z50070-4|CAA90394.2|  172|Caenorhabditis elegans Hypothetical pr...    27   9.7  
AF067618-6|AAC19197.2| 1015|Caenorhabditis elegans Hypothetical ...    27   9.7  

>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical protein
            F35A5.1 protein.
          Length = 1274

 Score = 33.1 bits (72), Expect = 0.15
 Identities = 16/69 (23%), Positives = 33/69 (47%)
 Frame = -1

Query: 456  IDSPEPDSFVPIAAHGAEVRRQQPKPRRALV*SN*PTTSGQHGAATTDQSPPGNWPTSPA 277
            ++ PEP+   P+ A    V+ + P P++A+     P+T       +  +  P + P  P+
Sbjct: 810  VNVPEPEKKTPVLAKKTPVKPRDPSPKKAVPAK--PSTKTDAPPVSVKKPEPVSKPKEPS 867

Query: 276  PPRVQLATP 250
            P + +  +P
Sbjct: 868  PKKAEPNSP 876



 Score = 27.5 bits (58), Expect = 7.4
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -1

Query: 456  IDSPEPDSFVPIAAHGAEVRRQQPKPRRA 370
            + +PEP+   P+ A  A  + + P P++A
Sbjct: 1000 VSAPEPEKKTPVLAKKAPAKPRDPSPKKA 1028


>Z81586-3|CAB04691.1|  203|Caenorhabditis elegans Hypothetical
           protein T05F1.4 protein.
          Length = 203

 Score = 31.1 bits (67), Expect = 0.60
 Identities = 11/35 (31%), Positives = 22/35 (62%)
 Frame = -2

Query: 404 RYADNSQNHDEHWYNQINQQRQDSTEQPPQTNHHQ 300
           R +++S++  EH +N   QQ + ++  P  +NH+Q
Sbjct: 46  RRSNHSEDRHEHRFNNYRQQNRPNSRTPSPSNHNQ 80


>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin
           (drosophila actin-binding)homolog protein 1, isoform a
           protein.
          Length = 4488

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -2

Query: 374 EHWYNQINQQRQDSTEQPPQTNHHQETGQHHLR 276
           +H + Q  QQ+Q   EQ  Q  HH    Q H+R
Sbjct: 200 QHQHQQHQQQQQQPQEQQQQRFHHFNQYQQHIR 232


>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin
           (drosophila actin-binding)homolog protein 1, isoform d
           protein.
          Length = 4369

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -2

Query: 374 EHWYNQINQQRQDSTEQPPQTNHHQETGQHHLR 276
           +H + Q  QQ+Q   EQ  Q  HH    Q H+R
Sbjct: 200 QHQHQQHQQQQQQPQEQQQQRFHHFNQYQQHIR 232


>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin
           (drosophila actin-binding)homolog protein 1, isoform c
           protein.
          Length = 4447

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -2

Query: 374 EHWYNQINQQRQDSTEQPPQTNHHQETGQHHLR 276
           +H + Q  QQ+Q   EQ  Q  HH    Q H+R
Sbjct: 200 QHQHQQHQQQQQQPQEQQQQRFHHFNQYQQHIR 232


>AF098994-4|AAO21390.1|  606|Caenorhabditis elegans Hypothetical
           protein T06A4.1b protein.
          Length = 606

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 22/62 (35%), Positives = 26/62 (41%)
 Frame = -1

Query: 384 KPRRALV*SN*PTTSGQHGAATTDQSPPGNWPTSPAPPRVQLATP*RN*PCHSHSVLTKT 205
           KP  A       TT+ +    TT    P   PT P+P  V+ AT     P  S S  T T
Sbjct: 480 KPTEAPTTEEPTTTTTEEPTTTTTTEEPTEAPTEPSPTTVE-ATEASTTPEASTSSETST 538

Query: 204 TE 199
           TE
Sbjct: 539 TE 540


>Z93374-2|CAB07553.2|  348|Caenorhabditis elegans Hypothetical
           protein C06C6.3 protein.
          Length = 348

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -1

Query: 138 PKLFHRSPW*RNIAKYIMIYVAAVFELTVKAFPSYMVHFFFTK 10
           P +F +SP    + KY+MIY+ + FE+         +  FFTK
Sbjct: 30  PVIFLKSPKDLGLYKYMMIYI-STFEIFFGCVELLTIPDFFTK 71


>AL110487-14|CAB54432.1|  395|Caenorhabditis elegans Hypothetical
           protein Y39E4B.3a protein.
          Length = 395

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -2

Query: 395 DNSQNHDEHWYNQINQQRQDSTEQPPQTNHHQETGQHH 282
           D+ Q HD+  Y+Q  QQ+      PPQ    Q+ GQ++
Sbjct: 327 DDQQYHDD--YSQ--QQQYQMQNYPPQQQQQQQYGQYY 360


>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical protein
            C46C2.1b protein.
          Length = 1677

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -2

Query: 356  INQQRQDSTEQPPQTNHHQETGQHHLRL 273
            ++ + +D+   PP+ +HHQ    HH  L
Sbjct: 1600 VSSRHRDNQSAPPRHHHHQPHPPHHPHL 1627


>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical protein
            C46C2.1a protein.
          Length = 1838

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -2

Query: 356  INQQRQDSTEQPPQTNHHQETGQHHLRL 273
            ++ + +D+   PP+ +HHQ    HH  L
Sbjct: 1761 VSSRHRDNQSAPPRHHHHQPHPPHHPHL 1788


>Z50070-4|CAA90394.2|  172|Caenorhabditis elegans Hypothetical
           protein F43G6.3 protein.
          Length = 172

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +3

Query: 48  PSPLTQRQLRRRSLYTSLYYATRAIDEIASDMQTDRCRWSRSLL 179
           P   T+ + ++  L TSL  ++R  D++  +   DRC  SR  L
Sbjct: 128 PKSETRPRHKKYLLATSLLLSSRIFDQLWRNFALDRCLTSRGTL 171


>AF067618-6|AAC19197.2| 1015|Caenorhabditis elegans Hypothetical
           protein F56H1.5 protein.
          Length = 1015

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = -2

Query: 401 YADNSQNHDEHWYNQINQQRQDSTEQPPQTNHHQETGQHHLRLLVFN*P-RLKE 243
           + +N Q   +  ++ I Q  Q+S     +   H     HHL + +FN P R++E
Sbjct: 473 FVENEQGTLQPTFSMIYQTNQESWRSICEKTRHVMPIHHHLPIEMFNTPTRIRE 526


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,537,646
Number of Sequences: 27780
Number of extensions: 293694
Number of successful extensions: 1138
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1130
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)