Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30k13
         (274 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023183-1|AAY55599.1|  326|Drosophila melanogaster IP10776p pro...    29   1.2  
AE014134-921|AAF52251.1|  326|Drosophila melanogaster CG14020-PA...    29   1.2  
AE013599-3145|AAF46684.2|  108|Drosophila melanogaster CG30389-P...    28   1.5  
AE013599-3144|AAM70856.1|  980|Drosophila melanogaster CG30389-P...    28   1.5  
AE013599-3143|AAF46685.2|  980|Drosophila melanogaster CG30389-P...    28   1.5  

>BT023183-1|AAY55599.1|  326|Drosophila melanogaster IP10776p
           protein.
          Length = 326

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = -3

Query: 224 FYASYTKNTKLVYRNSLCS*SS 159
           F   +T NT +VY+NSLCS +S
Sbjct: 3   FIPLHTTNTAIVYKNSLCSFAS 24


>AE014134-921|AAF52251.1|  326|Drosophila melanogaster CG14020-PA
           protein.
          Length = 326

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = -3

Query: 224 FYASYTKNTKLVYRNSLCS*SS 159
           F   +T NT +VY+NSLCS +S
Sbjct: 3   FIPLHTTNTAIVYKNSLCSFAS 24


>AE013599-3145|AAF46684.2|  108|Drosophila melanogaster CG30389-PB,
           isoform B protein.
          Length = 108

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 14/54 (25%), Positives = 25/54 (46%)
 Frame = +2

Query: 2   IWWKIVICHQVMLLIRCHIKFPDAIVQILLTIHSAFNLKTFLIYVMYLCFVFMS 163
           I W IV+    M + R    +P  +  +L ++H +F  K     V+++C    S
Sbjct: 37  ILWAIVMVADFMFMFRFEFLWPFWL--LLRSVHDSFKYKGLAFSVLFVCIAITS 88


>AE013599-3144|AAM70856.1|  980|Drosophila melanogaster CG30389-PC,
           isoform C protein.
          Length = 980

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 14/54 (25%), Positives = 25/54 (46%)
 Frame = +2

Query: 2   IWWKIVICHQVMLLIRCHIKFPDAIVQILLTIHSAFNLKTFLIYVMYLCFVFMS 163
           I W IV+    M + R    +P  +  +L ++H +F  K     V+++C    S
Sbjct: 37  ILWAIVMVADFMFMFRFEFLWPFWL--LLRSVHDSFKYKGLAFSVLFVCIAITS 88


>AE013599-3143|AAF46685.2|  980|Drosophila melanogaster CG30389-PA,
           isoform A protein.
          Length = 980

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 14/54 (25%), Positives = 25/54 (46%)
 Frame = +2

Query: 2   IWWKIVICHQVMLLIRCHIKFPDAIVQILLTIHSAFNLKTFLIYVMYLCFVFMS 163
           I W IV+    M + R    +P  +  +L ++H +F  K     V+++C    S
Sbjct: 37  ILWAIVMVADFMFMFRFEFLWPFWL--LLRSVHDSFKYKGLAFSVLFVCIAITS 88


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,640,727
Number of Sequences: 53049
Number of extensions: 163457
Number of successful extensions: 163
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 163
length of database: 24,988,368
effective HSP length: 69
effective length of database: 21,327,987
effective search space used: 447887727
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)