Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30k13
         (274 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92973-1|CAB07493.2|  323|Caenorhabditis elegans Hypothetical pr...    28   0.79 
Z75547-7|CAA99904.1|  302|Caenorhabditis elegans Hypothetical pr...    28   0.79 
AF162674-1|AAF80462.1|  575|Caenorhabditis elegans CNT-like nucl...    27   1.8  
AF016413-4|AAM29683.1|  454|Caenorhabditis elegans Hypothetical ...    27   1.8  
AF016413-3|AAB65256.3|  555|Caenorhabditis elegans Hypothetical ...    27   1.8  
AF038618-7|AAB92070.2|  227|Caenorhabditis elegans Syaptophysin ...    26   3.2  
Z81595-1|CAB04753.2|  337|Caenorhabditis elegans Hypothetical pr...    26   4.2  
U21324-8|AAA62561.1|  190|Caenorhabditis elegans Hypothetical pr...    25   5.5  
AL110500-13|CAB54495.1|  791|Caenorhabditis elegans Hypothetical...    25   5.5  
Z73423-4|CAH60746.1|  307|Caenorhabditis elegans Hypothetical pr...    25   7.3  
Z73423-3|CAA97775.2|  327|Caenorhabditis elegans Hypothetical pr...    25   7.3  
AC024761-14|AAM97970.1|   98|Caenorhabditis elegans Peroxiredoxi...    25   9.7  

>Z92973-1|CAB07493.2|  323|Caenorhabditis elegans Hypothetical
           protein Y6G8.1 protein.
          Length = 323

 Score = 28.3 bits (60), Expect = 0.79
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +2

Query: 56  IKFPDAIVQILLTIHSAFNLKTFLIYVMYLC 148
           +KFP A++Q  +++     L  FL YV+Y+C
Sbjct: 86  MKFPQAVIQFDVSLQI---LMLFLFYVLYIC 113


>Z75547-7|CAA99904.1|  302|Caenorhabditis elegans Hypothetical
           protein R11D1.6 protein.
          Length = 302

 Score = 28.3 bits (60), Expect = 0.79
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
 Frame = +2

Query: 2   IWWKIVICHQVMLLIRCHIKFPDAIVQILLTIHSAFNLKTFLIY----VMYLCFVFMSFK 169
           +W+ I I   +ML + C I F   ++QI +   SAF   +  +Y     +   F+  +FK
Sbjct: 209 LWFVITIIPLIMLYVPCSIVFMCPLLQINIGNCSAFITVSVAVYPAVDTLPNIFIIKNFK 268

Query: 170 ST 175
            T
Sbjct: 269 ET 270


>AF162674-1|AAF80462.1|  575|Caenorhabditis elegans CNT-like
           nucleoside transporter protein.
          Length = 575

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 15/55 (27%), Positives = 24/55 (43%)
 Frame = +2

Query: 83  ILLTIHSAFNLKTFLIYVMYLCFVFMSFKSTMNCDRLT*CFLCMMHKITGNVYLK 247
           I+ +IH    L  F  YV Y+ F+F+   + M  +        +MH     + LK
Sbjct: 137 IIDSIHDLTRLTGFFAYVFYILFMFVFSNNRMKINWSVVSSALIMHYCVALIILK 191


>AF016413-4|AAM29683.1|  454|Caenorhabditis elegans Hypothetical
           protein F27E11.2b protein.
          Length = 454

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 15/55 (27%), Positives = 24/55 (43%)
 Frame = +2

Query: 83  ILLTIHSAFNLKTFLIYVMYLCFVFMSFKSTMNCDRLT*CFLCMMHKITGNVYLK 247
           I+ +IH    L  F  YV Y+ F+F+   + M  +        +MH     + LK
Sbjct: 137 IIDSIHDLTRLTGFFAYVFYILFMFVFSNNRMKINWSVVSSALIMHYCVALIILK 191


>AF016413-3|AAB65256.3|  555|Caenorhabditis elegans Hypothetical
           protein F27E11.2a protein.
          Length = 555

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 15/55 (27%), Positives = 24/55 (43%)
 Frame = +2

Query: 83  ILLTIHSAFNLKTFLIYVMYLCFVFMSFKSTMNCDRLT*CFLCMMHKITGNVYLK 247
           I+ +IH    L  F  YV Y+ F+F+   + M  +        +MH     + LK
Sbjct: 137 IIDSIHDLTRLTGFFAYVFYILFMFVFSNNRMKINWSVVSSALIMHYCVALIILK 191


>AF038618-7|AAB92070.2|  227|Caenorhabditis elegans Syaptophysin
           protein 1 protein.
          Length = 227

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = +2

Query: 119 TFLIYVMYLCFVFMSF 166
           T LIYV+++CFV++ F
Sbjct: 101 TALIYVIFICFVYVIF 116


>Z81595-1|CAB04753.2|  337|Caenorhabditis elegans Hypothetical
           protein T22H2.1 protein.
          Length = 337

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = +2

Query: 8   WKIVICHQVMLLIRCHIKFPDAIVQILLTIHSAFNLKTFLIYVMYL 145
           W  V C ++   + C +   +A  QI  T  S   L  FL+++ +L
Sbjct: 98  WVGVFCFELAAGLTCFVYRHNAAAQINQTYSSKLYLDKFLLFLTHL 143


>U21324-8|AAA62561.1|  190|Caenorhabditis elegans Hypothetical
           protein C35D10.5 protein.
          Length = 190

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 5   WWKIVICHQVMLLIRCHIKF 64
           W+K+ + H  M+L+R H +F
Sbjct: 49  WYKLTLMHTWMVLMRLHSEF 68


>AL110500-13|CAB54495.1|  791|Caenorhabditis elegans Hypothetical
           protein Y87G2A.12 protein.
          Length = 791

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +2

Query: 86  LLTIHSAFNLKTFLIYVMYLCFVFMSFKSTMNCDR 190
           LL   SA NL+  L     +C+     KSTM+C R
Sbjct: 755 LLRPRSAANLQFRLPEFSMICYQRYQIKSTMDCPR 789


>Z73423-4|CAH60746.1|  307|Caenorhabditis elegans Hypothetical
           protein C03A3.1b protein.
          Length = 307

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 11/43 (25%), Positives = 24/43 (55%)
 Frame = +2

Query: 38  LLIRCHIKFPDAIVQILLTIHSAFNLKTFLIYVMYLCFVFMSF 166
           LL +C +   +     +LT++SA ++  F++   +  F+F +F
Sbjct: 239 LLSQCTVFLLNIYGHWILTVYSANHITAFMLSGFFTSFLFSAF 281


>Z73423-3|CAA97775.2|  327|Caenorhabditis elegans Hypothetical
           protein C03A3.1a protein.
          Length = 327

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 11/43 (25%), Positives = 24/43 (55%)
 Frame = +2

Query: 38  LLIRCHIKFPDAIVQILLTIHSAFNLKTFLIYVMYLCFVFMSF 166
           LL +C +   +     +LT++SA ++  F++   +  F+F +F
Sbjct: 259 LLSQCTVFLLNIYGHWILTVYSANHITAFMLSGFFTSFLFSAF 301


>AC024761-14|AAM97970.1|   98|Caenorhabditis elegans Peroxiredoxin
           protein 6, isoform b protein.
          Length = 98

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = +2

Query: 65  PDAIVQILLTIHSAFNLKTFLIYVMYLCFVFM 160
           P+ ++ +LL     F    FL++ +Y C +F+
Sbjct: 21  PEYLLWLLLPFFILFIFPIFLVFFIYGCVIFV 52


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,776,896
Number of Sequences: 27780
Number of extensions: 98184
Number of successful extensions: 152
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 151
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 227290938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)