Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30k09
         (779 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex det...    23   3.2  
DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex det...    23   4.2  
DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex det...    23   4.2  
DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex det...    23   4.2  
DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex det...    23   4.2  
DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex det...    23   4.2  
DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex det...    23   4.2  
S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor prot...    22   5.6  
DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex det...    22   5.6  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    22   7.4  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   9.7  

>DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 14/62 (22%), Positives = 22/62 (35%)
 Frame = +1

Query: 565 KNYKPPEAQRLKEKPGSAGYNNYGKNQPRKNYPDGDSMYGAGTQFSSEGPMEVACGDDDT 744
           ++ +P     L      + YNNY  N    NY           Q     P+ + CG+  +
Sbjct: 75  RSKEPKIVSSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIPVPVPVPIYCGNFPS 134

Query: 745 VP 750
            P
Sbjct: 135 RP 136


>DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 14/62 (22%), Positives = 22/62 (35%)
 Frame = +1

Query: 565 KNYKPPEAQRLKEKPGSAGYNNYGKNQPRKNYPDGDSMYGAGTQFSSEGPMEVACGDDDT 744
           ++ +P     L      + YNNY  N    NY           Q     P+ + CG+  +
Sbjct: 75  RSKEPKIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIPVPVPVPIYCGNFPS 134

Query: 745 VP 750
            P
Sbjct: 135 RP 136


>DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 14/62 (22%), Positives = 22/62 (35%)
 Frame = +1

Query: 565 KNYKPPEAQRLKEKPGSAGYNNYGKNQPRKNYPDGDSMYGAGTQFSSEGPMEVACGDDDT 744
           ++ +P     L      + YNNY  N    NY           Q     P+ + CG+  +
Sbjct: 75  RSKEPKIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIPVPVPVPIYCGNFPS 134

Query: 745 VP 750
            P
Sbjct: 135 RP 136


>DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 14/62 (22%), Positives = 22/62 (35%)
 Frame = +1

Query: 565 KNYKPPEAQRLKEKPGSAGYNNYGKNQPRKNYPDGDSMYGAGTQFSSEGPMEVACGDDDT 744
           ++ +P     L      + YNNY  N    NY           Q     P+ + CG+  +
Sbjct: 75  RSKEPKIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIPVPVPVPIYCGNFPS 134

Query: 745 VP 750
            P
Sbjct: 135 RP 136


>DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 14/62 (22%), Positives = 22/62 (35%)
 Frame = +1

Query: 565 KNYKPPEAQRLKEKPGSAGYNNYGKNQPRKNYPDGDSMYGAGTQFSSEGPMEVACGDDDT 744
           ++ +P     L      + YNNY  N    NY           Q     P+ + CG+  +
Sbjct: 75  RSKEPKIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIPVPVPVPIYCGNFPS 134

Query: 745 VP 750
            P
Sbjct: 135 RP 136


>DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 14/62 (22%), Positives = 22/62 (35%)
 Frame = +1

Query: 565 KNYKPPEAQRLKEKPGSAGYNNYGKNQPRKNYPDGDSMYGAGTQFSSEGPMEVACGDDDT 744
           ++ +P     L      + YNNY  N    NY           Q     P+ + CG+  +
Sbjct: 75  RSKEPKIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIPVPVPVPIYCGNFPS 134

Query: 745 VP 750
            P
Sbjct: 135 RP 136


>DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 14/62 (22%), Positives = 22/62 (35%)
 Frame = +1

Query: 565 KNYKPPEAQRLKEKPGSAGYNNYGKNQPRKNYPDGDSMYGAGTQFSSEGPMEVACGDDDT 744
           ++ +P     L      + YNNY  N    NY           Q     P+ + CG+  +
Sbjct: 75  RSKEPKIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIPVPVPVPIYCGNFPS 134

Query: 745 VP 750
            P
Sbjct: 135 RP 136


>S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor
           protein.
          Length = 90

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 467 RAAC*DTFFFGCVLTVITGMLS 402
           + AC DTF  G ++   +G+ S
Sbjct: 46  KLACTDTFMEGVIVLAFSGLFS 67


>DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 13/57 (22%), Positives = 20/57 (35%)
 Frame = +1

Query: 565 KNYKPPEAQRLKEKPGSAGYNNYGKNQPRKNYPDGDSMYGAGTQFSSEGPMEVACGD 735
           ++ +P     L      + YNNY  N    NY           Q     P+ + CG+
Sbjct: 75  RSKEPKIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIPIPVPVPIYCGN 131


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 10/43 (23%), Positives = 15/43 (34%)
 Frame = +1

Query: 529 EQHMMLGEMRGTKNYKPPEAQRLKEKPGSAGYNNYGKNQPRKN 657
           E+  +L E    K Y     +  K       Y  YGK    ++
Sbjct: 247 EKEKLLEERTSRKRYSRSREREQKSYKNEREYRKYGKTSKERS 289


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/21 (38%), Positives = 16/21 (76%)
 Frame = -2

Query: 541 SYAVQRKQDQHILLSDYVASL 479
           +YA + K+D+ +LL++  +SL
Sbjct: 284 NYAEENKRDEIVLLTEAYSSL 304


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,628
Number of Sequences: 438
Number of extensions: 4737
Number of successful extensions: 21
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24518154
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)