Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30k06
(269 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 25 0.22
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 20 4.7
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 20 6.2
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 20 6.2
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 20 6.2
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 20 6.2
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 20 6.2
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 20 6.2
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 20 6.2
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 20 6.2
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 20 6.2
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 20 6.2
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 19 8.2
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 24.6 bits (51), Expect = 0.22
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = -2
Query: 223 IHNVNTCDSFSYNTDLGQFRSNSTSNF 143
IHN N ++ +YN + + +N+ +N+
Sbjct: 323 IHNNNNYNNNNYNNNYNNYNNNNYNNY 349
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 20.2 bits (40), Expect = 4.7
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 82 KGAIQTA*GAKDRINKSS 135
KG+I GA+D NK++
Sbjct: 190 KGSISNIDGAEDHCNKTA 207
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 19.8 bits (39), Expect = 6.2
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +1
Query: 10 SSFRRERDRQNGQSEVFRIKDKR 78
S + RER ++ +R KD+R
Sbjct: 229 SRYSRERSCSRDRNREYRKKDRR 251
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 19.8 bits (39), Expect = 6.2
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +1
Query: 10 SSFRRERDRQNGQSEVFRIKDKR 78
S + RER ++ +R KD+R
Sbjct: 229 SHYSRERSCSRDRNREYRKKDRR 251
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 19.8 bits (39), Expect = 6.2
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +1
Query: 10 SSFRRERDRQNGQSEVFRIKDKR 78
S + RER ++ +R KD+R
Sbjct: 229 SHYSRERSCSRDRNREYRKKDRR 251
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 19.8 bits (39), Expect = 6.2
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +1
Query: 10 SSFRRERDRQNGQSEVFRIKDKR 78
S + RER ++ +R KD+R
Sbjct: 229 SHYSRERSCSRDRNREYRKKDRR 251
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 19.8 bits (39), Expect = 6.2
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +1
Query: 10 SSFRRERDRQNGQSEVFRIKDKR 78
S + RER ++ +R KD+R
Sbjct: 229 SHYSRERSCSRDRNREYRKKDRR 251
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 19.8 bits (39), Expect = 6.2
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +1
Query: 10 SSFRRERDRQNGQSEVFRIKDKR 78
S + RER ++ +R KD+R
Sbjct: 218 SHYSRERSCSRDRNREYRKKDRR 240
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 19.8 bits (39), Expect = 6.2
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +1
Query: 10 SSFRRERDRQNGQSEVFRIKDKR 78
S + RER ++ +R KD+R
Sbjct: 229 SRYSRERSCSRDRNREYRKKDRR 251
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 19.8 bits (39), Expect = 6.2
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +1
Query: 10 SSFRRERDRQNGQSEVFRIKDKR 78
S + RER ++ +R KD+R
Sbjct: 234 SRYSRERSCSRDRNREYRKKDRR 256
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 19.8 bits (39), Expect = 6.2
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +1
Query: 10 SSFRRERDRQNGQSEVFRIKDKR 78
S + RER ++ +R KD+R
Sbjct: 229 SRYSRERSCSRDRNREYRKKDRR 251
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 19.8 bits (39), Expect = 6.2
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +1
Query: 10 SSFRRERDRQNGQSEVFRIKDKR 78
S + RER ++ +R KD+R
Sbjct: 229 SRYSRERSCSRDRNREYREKDRR 251
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 19.4 bits (38), Expect = 8.2
Identities = 8/21 (38%), Positives = 10/21 (47%)
Frame = +1
Query: 181 PCCKKSYRTCLHCVSPEDEGQ 243
PC SY + L P D G+
Sbjct: 245 PCVSISYLSVLAFYLPADSGE 265
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,218
Number of Sequences: 438
Number of extensions: 804
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used: 5138079
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)
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