Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30k01
(765 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 68 2e-12
SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces p... 44 2e-05
SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces po... 44 2e-05
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 41 2e-04
SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces po... 40 3e-04
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 39 7e-04
SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces po... 39 9e-04
SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces pom... 38 0.001
SPBC1709.07 |erg27||3-keto sterol reductase |Schizosaccharomyces... 36 0.005
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 36 0.006
SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces po... 32 0.078
SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein homolog|Schizosacch... 28 1.3
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 28 1.7
SPBC800.13 |||histone H4 variant|Schizosaccharomyces pombe|chr 2... 27 2.2
SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb... 27 2.2
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 27 2.9
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 26 5.1
SPAC9G1.09 |sid1||PAK-related kinase Sid1|Schizosaccharomyces po... 26 5.1
SPAC823.09c |||L-asparaginase |Schizosaccharomyces pombe|chr 1||... 26 6.8
SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr 1|||M... 26 6.8
SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 25 9.0
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 25 9.0
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 25 9.0
SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces po... 25 9.0
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 67.7 bits (158), Expect = 2e-12
Identities = 50/160 (31%), Positives = 75/160 (46%), Gaps = 8/160 (5%)
Frame = +2
Query: 269 DLKDKTCLITGANSGVGLEMTKCLNLCGCTVLMACRNTYAASVVAKNTC--LKPDSLRLY 442
DL K L+TG++ G+G L G V +A RN V K ++ +R
Sbjct: 39 DLTGKVALVTGSSGGIGYVTALELARKGAKVYLAGRNEEKYQKVMKQIHDEVRHSKIRFL 98
Query: 443 ELNLASLRSVRKCSDDLLNKEKKIDIVILNAGIFGLPWTETVDKLEITFQVNYLSQYY-- 616
L+L SV + ++ + KE+K+ I++ NAGI P+ T D E+ Q NYLS Y
Sbjct: 99 RLDLLDFESVYQAAESFIAKEEKLHILVNNAGIMNPPFELTKDGYELQIQTNYLSHYLFT 158
Query: 617 -LLMNIEDILADNAR---VVIISSESHRYVTLPFNEILTP 724
LL+ A+ R V I+ S Y+ P++ I P
Sbjct: 159 ELLLPTLRRTAEECRPGDVRIVHVASIAYLQAPYSGIYFP 198
>SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 254
Score = 44.4 bits (100), Expect = 2e-05
Identities = 37/135 (27%), Positives = 68/135 (50%), Gaps = 4/135 (2%)
Frame = +2
Query: 290 LITGANSGVGLEMTKCL-NLCGCTVLMACRNTYAASVVAKNTCLKPDSLRLYELNLASLR 466
+I G N G+GL + K L N G TV + R +AS + K+ ++ + +L++ SLR
Sbjct: 10 VIVGGNRGIGLSLVKELSNKEGVTVFASARGPGSASEL-KDWSKTHSNVHIIKLDVTSLR 68
Query: 467 SVRKCSDDLLNKEKKIDIVILNAGIFG--LPWTETVDKLEIT-FQVNYLSQYYLLMNIED 637
S + + + K ID++ +N+GI P +T D+L ++ +Q N L ++
Sbjct: 69 SAKDAAMQVEKVVKCIDVLWVNSGISKSFQPVLKTSDELWMSHYQTNVLGPIHVYQAFYH 128
Query: 638 ILADNARVVIISSES 682
+L + I+ + S
Sbjct: 129 LLKEGKLKNIVFTSS 143
>SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 44.0 bits (99), Expect = 2e-05
Identities = 23/89 (25%), Positives = 46/89 (51%)
Frame = +2
Query: 278 DKTCLITGANSGVGLEMTKCLNLCGCTVLMACRNTYAASVVAKNTCLKPDSLRLYELNLA 457
+K I G N G+GL + K L+ TV+ A A+ + ++ + +L+++
Sbjct: 5 NKIYFIAGGNRGIGLSLVKELSNREGTVVFASARKPEAATELQEWSKSHSNVHIIKLDIS 64
Query: 458 SLRSVRKCSDDLLNKEKKIDIVILNAGIF 544
SL S + + ++ K+D++ +N+GIF
Sbjct: 65 SLESANEAAQEVAKAVGKVDVLWVNSGIF 93
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 41.1 bits (92), Expect = 2e-04
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Frame = +2
Query: 254 VTKGLDLKDKTCLITGANSGVGLEMTKCLNLCGCTV-LMACRNTYAASVVAKNTCLKPDS 430
+T LK KT LITG + G+G + K G V L+ RN A A+
Sbjct: 1 MTSMFSLKGKTTLITGGSGGIGFSIAKAFAAAGSNVGLLYGRNKKALEYAAELRDKHGVQ 60
Query: 431 LRLYELNLASLRSVRKCSDDLLNK-EKKIDIVILNAGIFGLPWTETVDKLE 580
+ Y + + +V + ++ + + ++D++I NAGI +P DK E
Sbjct: 61 AKAYSCPIENRSAVIETTNQAVEELGGRLDVMIANAGI-AIPHLSLEDKNE 110
>SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 40.3 bits (90), Expect = 3e-04
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 6/140 (4%)
Frame = +2
Query: 278 DKTCLITGANSGVGLEMTKCLNLC-GCTVLMACRNTYAASVVAKNTCLKPDSLRLYELNL 454
+K I G N G+GL + K L+ G TV + R AA+ + + + P +++ EL++
Sbjct: 5 NKVYFIAGGNRGIGLSLVKELSSREGTTVFASARKPEAATELQEWSKSHP-NVKTVELDV 63
Query: 455 ASLRSVRKCSDDLLNKEKKIDIVILNAGIFGLPWT--ETVDKL-EITFQVNYLSQYYLLM 625
S +S + + + ID++ LN+GI +T E +++ +Q N L ++
Sbjct: 64 TSQQSANEAAQSVAKAVDGIDVLWLNSGICQSYYTVMEAPEEVWNAHYQTNVLGPIHVFK 123
Query: 626 NIEDILA--DNARVVIISSE 679
+L +V+ SSE
Sbjct: 124 AFYPLLTKKKTRQVIFTSSE 143
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 39.1 bits (87), Expect = 7e-04
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Frame = +2
Query: 272 LKDKTCLITGANSGVGLEMT-KCLNLCGCTVLMACRNTYAASVVAKNTCLKPD-SLRLYE 445
L KT LITGA+SG+G + + +++A R +AK K + S+ +
Sbjct: 4 LDGKTILITGASSGIGKSTAFEIAKVAKVKLILAARRFSTVEEIAKELESKYEVSVLPLK 63
Query: 446 LNLASLRSVRKCSDDLLNKEKKIDIVILNAGI 541
L+++ L+S+ + L + ID++I NAG+
Sbjct: 64 LDVSDLKSIPGVIESLPKEFADIDVLINNAGL 95
>SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 38.7 bits (86), Expect = 9e-04
Identities = 20/89 (22%), Positives = 44/89 (49%)
Frame = +2
Query: 278 DKTCLITGANSGVGLEMTKCLNLCGCTVLMACRNTYAASVVAKNTCLKPDSLRLYELNLA 457
+K I G N G+GL + K L+ TV+ A A+ + ++ + +L+++
Sbjct: 5 NKIYFIAGGNRGIGLSLVKELSNRKGTVVFASARKPGAATKLQEWSKSHSNVHIIKLDVS 64
Query: 458 SLRSVRKCSDDLLNKEKKIDIVILNAGIF 544
SL S + + ++ +D++ +N+ +F
Sbjct: 65 SLESANEAAQEVTKVVDAVDVLWVNSAVF 93
>SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 397
Score = 38.3 bits (85), Expect = 0.001
Identities = 35/172 (20%), Positives = 80/172 (46%), Gaps = 14/172 (8%)
Frame = +2
Query: 242 TGEEVTKGLDLKDKTCLITGANSGVGLEMTKCLNLCGCTVLMACR---NTYAASVVAKNT 412
+G T + ++TG +SG+G + + L G V++ R + + +
Sbjct: 63 SGRTTTWERKMNGMVVMVTGGSSGIGQVVVEKLASLGAQVVILLRTEPDQFTVDYIMDLR 122
Query: 413 CLKPDSLRLYEL-NLASLRSVRKCSDDLLN--KEKKIDIVILNAGIFGLPWTE---TVDK 574
+ L E+ +L+S+ SVRK + ++ +++D+++L +G+ P+ + T +
Sbjct: 123 KRTKNQLIYTEVCDLSSMLSVRKFATKWIDCTPIRRLDMIVLCSGVLLPPFMDRQTTEEG 182
Query: 575 LEITFQVNYLSQYYLLMNIEDILAD-----NARVVIISSESHRYVTLPFNEI 715
+E+ + N+L Y LL + ++ R+V + S+ + FN++
Sbjct: 183 VELQWATNFLGPYQLLRILRPVIYGQPGHREVRIVAATCSSYILGNIDFNDL 234
>SPBC1709.07 |erg27||3-keto sterol reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 338
Score = 36.3 bits (80), Expect = 0.005
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 17/113 (15%)
Frame = +2
Query: 281 KTCLITGANSGVGLEM-TKCLNLCG---------CTVLMACRNTYAASVVAKNTC-LKPD 427
K LITG+NSG+G + T+ L TV++ CR+ A + PD
Sbjct: 5 KYALITGSNSGLGFGIATRLLQFYQPRLQDEPEVFTVILTCRSREKAEDACRRLKEFFPD 64
Query: 428 S---LRLYELNLASLRSVRKCSDDLLNKEKKIDIVILNAGIF---GLPWTETV 568
L L+L+++ SV D+ + K+D V LNAG + G+ W + +
Sbjct: 65 RKIRLEYVLLDLSNMASVEAAVQDIATRFPKLDFVYLNAGAWDLEGIQWLKAI 117
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 35.9 bits (79), Expect = 0.006
Identities = 34/141 (24%), Positives = 64/141 (45%), Gaps = 5/141 (3%)
Frame = +2
Query: 284 TCLITGANSGVGLEMTKCLNLCGCTVLMACRNTYAASVVAKNTCLKPDSLRLYELNLASL 463
T LITG++ G+G + K G V+ AC + + LK +L++ +
Sbjct: 7 TVLITGSSKGLGYALVKVGLAQGYNVI-ACSRAPDTITIEHSKLLK------LKLDVTDV 59
Query: 464 RSVRKCSDDLLNKEKKIDIVILNA--GIFGLPWTETVDKLEITFQVNYLSQYYLLMNIED 637
+SV D + +DIVI NA G+ G + ++++ VN+ Y+ +
Sbjct: 60 KSVETAFKDAKRRFGNVDIVINNAGYGLVGEFESYNIEEMHRQMNVNFWGVAYITKEALN 119
Query: 638 ILADN---ARVVIISSESHRY 691
++ ++ R++ ISS + Y
Sbjct: 120 LMRESGKGGRILQISSVAGYY 140
>SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 261
Score = 32.3 bits (70), Expect = 0.078
Identities = 22/93 (23%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Frame = +2
Query: 272 LKDKTCLITGANSGVGLEMTKCLNLCGCTVL---MACRNTYAASVVAKNTCLKPDSLRLY 442
LK K C++ GA G+G + G V+ + T A +A+ T ++ +L+
Sbjct: 19 LKGKNCVVFGAAKGIGFSIATAFAQAGGNVIITYLTTDPTEKAKKLAEETGVQVHTLK-- 76
Query: 443 ELNLASLRSVRKCSDDLLNKEKKIDIVILNAGI 541
++++ +V +++ K+I +V+ NAG+
Sbjct: 77 -IDISRSDTVEAGVEEIQKIFKEIHVVVANAGM 108
>SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2609
Score = 28.3 bits (60), Expect = 1.3
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 209 YFDLNFRIHGPTGEEVTKGLDLKDKTCLITGANSGVGLEMTKCL 340
YFD NF + ++V KGL TC+ SG G ++ L
Sbjct: 1247 YFD-NFTVQYAEAKDVIKGLLFSILTCIYNRITSGQGFSYSRLL 1289
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 27.9 bits (59), Expect = 1.7
Identities = 25/63 (39%), Positives = 32/63 (50%)
Frame = +2
Query: 404 KNTCLKPDSLRLYELNLASLRSVRKCSDDLLNKEKKIDIVILNAGIFGLPWTETVDKLEI 583
+N LK D R YE LASL S ++ LNK K+ ++VI I TE D+L
Sbjct: 1033 ENASLK-DQCRTYESQLASLVSKYSETESELNK-KEAELVIFQKEI-----TEYRDQLHK 1085
Query: 584 TFQ 592
FQ
Sbjct: 1086 AFQ 1088
>SPBC800.13 |||histone H4 variant|Schizosaccharomyces pombe|chr
2|||Manual
Length = 479
Score = 27.5 bits (58), Expect = 2.2
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -1
Query: 489 SSEHFRTDLSEARFNS*SRRLSGLRHVFLATTLAAYVFRHAMRTVHPHK 343
+S ++ T L + F LS RH + + Y R A RTV PHK
Sbjct: 2 ASHNYETPLKSSSFQHLVGTLSQRRH--FTPSRSRYTPRSAQRTVTPHK 48
>SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 247
Score = 27.5 bits (58), Expect = 2.2
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = +2
Query: 278 DKTCLITGANSGVGLEMTKCLNLCGCTVLMACRNTYAASVVAKNTCLKPDSLRLYELNLA 457
+K L+TG++ G+GL + L + ++ T + PDS +
Sbjct: 6 EKVILLTGSSKGIGLATAEALQKKAKVIAVSRSLTPELETL---LIQNPDSFVHVK---G 59
Query: 458 SLRSVRKCS-DDLLNKEKKIDIVILNAGI 541
+ V K S + + K K+D VILNAG+
Sbjct: 60 DVTEVGKASIETAIKKFGKLDSVILNAGV 88
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 27.1 bits (57), Expect = 2.9
Identities = 31/149 (20%), Positives = 62/149 (41%), Gaps = 5/149 (3%)
Frame = +2
Query: 272 LKDKTCLITGANSGVGLEMTKCLNLCGCTVLMACRNTYAASVVAKNTCLKPDSLR--LYE 445
L +K L+TG +SG+G G ++++C ++ + ++E
Sbjct: 40 LAEKKTLLTGGDSGIGKAAAVMFAREGSDLVISCLPEERDDAEVTRDLIEREGRNCWIWE 99
Query: 446 LNLASLRSVRKCSDDLLNKEKKIDIVILNAGIFGLPWT-ETVD--KLEITFQVNYLSQYY 616
L + R D L K ID+++ N + + E +D + ++TF+ N S ++
Sbjct: 100 GKLDKSDNCRDLVDFALKKLGWIDVLVNNIAYQQVAQSIEDIDDEQWDLTFKTNIFSFFW 159
Query: 617 LLMNIEDILADNARVVIISSESHRYVTLP 703
+ + + +V SS + YV P
Sbjct: 160 VTKAAISHMKSGSSIVNCSS-INAYVGRP 187
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 26.2 bits (55), Expect = 5.1
Identities = 17/87 (19%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Frame = +2
Query: 230 IHGPTGEEVTKGLDLKDKTCLITGANSGV---GLEMTKCLNLCGCTVLMACRNTYAASVV 400
+ G G + ++ + C+ G ++ + LE + L + + T+ +++
Sbjct: 613 LRGHVGRVYSVTINPSRQQCISAGTDAKIRIWNLESGELLQTLHGHSNLVSQVTFNQNIL 672
Query: 401 AKNTCLKPDSLRLYELNLASLRSVRKC 481
+ SLR+++LN S R + KC
Sbjct: 673 VSASAPPDTSLRVWDLNTGSCRDILKC 699
>SPAC9G1.09 |sid1||PAK-related kinase Sid1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 471
Score = 26.2 bits (55), Expect = 5.1
Identities = 11/42 (26%), Positives = 23/42 (54%)
Frame = +2
Query: 134 TTRNLILNDKVRAFSSSKVKSLVENYFDLNFRIHGPTGEEVT 259
T R+++LNDK+ A S ++S ++ L+ + ++T
Sbjct: 395 TIRSMLLNDKLSATQRSSLESFYTSFISLDKNLSSKFVNQIT 436
>SPAC823.09c |||L-asparaginase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 285
Score = 25.8 bits (54), Expect = 6.8
Identities = 32/136 (23%), Positives = 58/136 (42%), Gaps = 12/136 (8%)
Frame = +2
Query: 305 NSGVGLEMTKCLNLCG---CTV-LMACRNTYAASVVAKNTCLKPDSLRLYELNLASLRSV 472
N+GVG LN+ G C +M + ASV N C P LY LN + S
Sbjct: 62 NAGVGSN----LNIDGKVECEAGVMDSESGLTASVACCNCCRHPSEACLYILNKRKVMSQ 117
Query: 473 RKCSDDLLNKEKKIDIVILNAGIFGLPWTETVDKLEITFQVNY---LSQYYLLMNIEDIL 643
+ I+ ++L++ I +P + + + + Q+ + L Q + ++ +D +
Sbjct: 118 HGLVPPAMLVGNGIEKLLLHSNIKLVPESHLITERSMKTQIKWKEILYQNPINLSSQDTI 177
Query: 644 A-----DNARVVIISS 676
N R+ ++SS
Sbjct: 178 GVICVDKNGRIAVVSS 193
>SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 25.8 bits (54), Expect = 6.8
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 290 LITGANSGVGLEMTKCLNLCGCTVLMACRNTYAASVVAK 406
++TGA G+G E L + G V++ R +AK
Sbjct: 61 VVTGATDGIGKEYATQLAMSGFNVVLISRTQEKLDALAK 99
>SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 236
Score = 25.4 bits (53), Expect = 9.0
Identities = 16/88 (18%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Frame = +2
Query: 425 DSLRLYELNLASLRSVRKCSDDLLNKEKKIDIVILNAG--IFGLPWTETVDKLEITFQVN 598
+++ + +L++ + S++K + ++ +ID+++ NAG ++ + T +++ F N
Sbjct: 14 ENVLVTQLDVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQIHNIFNTN 73
Query: 599 YLSQYYLLMNIEDILADNARVVIISSES 682
++ I I +II+ S
Sbjct: 74 VFGALEVIKAITPIFRSQHNGMIINVSS 101
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 25.4 bits (53), Expect = 9.0
Identities = 32/152 (21%), Positives = 63/152 (41%), Gaps = 6/152 (3%)
Frame = +2
Query: 266 LDLKDKTCLITGANSGVGLEMTKCLNLCGCTVLMACRNTYAASVVAKNTCLKPDSLRLYE 445
+ ++ + LITGA G+G + K G V A + + D+ +
Sbjct: 1 MTVEGRVVLITGAAGGIGKVLCKMFTELGDRV---------AGIDIVDPSKVQDAALALQ 51
Query: 446 LNLASLRSVRKCSDDLLNKEKKIDIVILNAGI-----FGLPWTETVD-KLEITFQVNYLS 607
+++ + + ++ ID++I NAG+ F E+ D + + + NYL+
Sbjct: 52 ADVSKADQIETAIEKVIQTLGPIDVLINNAGLADDTPFEQLSHESWDHDVSLVLRGNYLT 111
Query: 608 QYYLLMNIEDILADNARVVIISSESHRYVTLP 703
Q Y++ ++ + V I S H Y+ P
Sbjct: 112 QRYVIPHMAKQGKGGSIVNIGSVNGHIYLGSP 143
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 25.4 bits (53), Expect = 9.0
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -1
Query: 324 SKPTPLFAPVIKHVLSFKSRPFVTSSPVGPCI 229
S P P APV+ V S RP V P P +
Sbjct: 633 SVPQPPAAPVVPEVPSVPQRPAVPVVPEAPSV 664
>SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 236
Score = 25.4 bits (53), Expect = 9.0
Identities = 16/88 (18%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Frame = +2
Query: 425 DSLRLYELNLASLRSVRKCSDDLLNKEKKIDIVILNAG--IFGLPWTETVDKLEITFQVN 598
+++ + +L++ + S++K + ++ +ID+++ NAG ++ + T +++ F N
Sbjct: 14 ENVLVTQLDVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQIHNIFNTN 73
Query: 599 YLSQYYLLMNIEDILADNARVVIISSES 682
++ I I +II+ S
Sbjct: 74 VFGALEVIKAITPIFRSQHNGMIINVSS 101
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,035,843
Number of Sequences: 5004
Number of extensions: 60827
Number of successful extensions: 175
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 169
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 367316502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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