Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30j15
         (688 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0044 - 19198001-19199236                                         29   4.6  
09_01_0046 + 820503-820795,821734-821914                               28   6.0  
03_01_0617 + 4532651-4532893,4534713-4534939,4535077-4535150,453...    28   6.0  
02_05_0844 - 32144417-32144764,32145588-32145686,32146218-321464...    28   6.0  
09_06_0352 + 22472369-22472731,22472829-22472941,22473420-224742...    28   8.0  
08_01_0941 - 9301603-9301788,9301866-9301958,9302060-9302120,930...    28   8.0  

>02_04_0044 - 19198001-19199236
          Length = 411

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +3

Query: 621 AHRAGGKGGYVKDTPLTRLGW 683
           ++ AG  GG    TPL RLGW
Sbjct: 259 SNSAGADGGAASPTPLVRLGW 279


>09_01_0046 + 820503-820795,821734-821914
          Length = 157

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 19/49 (38%), Positives = 26/49 (53%)
 Frame = +3

Query: 201 VLTVYFIVLCLVLGSDCKSESGSNTDSEMAATYPHEDAADLAYKKSEET 347
           VL V  ++  L+L S      GS+  S +AAT P E AA  A K  +E+
Sbjct: 48  VLEVAAVLRRLLLAS-VAGGGGSSDGSRLAATVPEEAAATSALKAGKES 95


>03_01_0617 +
           4532651-4532893,4534713-4534939,4535077-4535150,
           4535753-4535809,4535940-4536280,4536979-4537047,
           4537152-4537219,4537404-4539569,4540101-4540178,
           4540326-4540437,4540722-4540772,4540886-4540936
          Length = 1178

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 20/76 (26%), Positives = 33/76 (43%)
 Frame = +3

Query: 240 GSDCKSESGSNTDSEMAATYPHEDAADLAYKKSEETYQEWDKYWSEVMNSRSDSILTITQ 419
           GS  +S SGS++DSE + +     +   +      +  + D   S      SD+ + IT 
Sbjct: 408 GSSSESGSGSDSDSESSDSGSDSGSQSRSAASGSGSSSDSDSDASSSSKEGSDAFVDITS 467

Query: 420 GLPMNWELSKAAEEMK 467
                    KAA+E+K
Sbjct: 468 DDDKGGAHRKAADELK 483


>02_05_0844 -
           32144417-32144764,32145588-32145686,32146218-32146410,
           32147049-32147107,32147189-32147263,32147557-32147670,
           32147776-32147895,32148204-32148216,32148421-32148512,
           32149078-32149164,32149254-32149328,32149630-32149680,
           32149852-32149947,32150135-32150221,32150312-32150368,
           32150475-32150600,32150709-32150949,32151028-32151114,
           32151260-32151637,32152847-32153187
          Length = 912

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -3

Query: 194 VCCSLTSVQMAIKTHVLISINVR 126
           VCC LT++Q A+  H + S NV+
Sbjct: 493 VCCKLTALQTALYNHFIHSKNVK 515


>09_06_0352 +
           22472369-22472731,22472829-22472941,22473420-22474226,
           22474314-22474620,22474862-22475027,22475491-22475534,
           22476019-22476161,22477900-22477937,22478032-22478129,
           22478130-22478220,22478514-22478693,22479311-22479495,
           22479583-22479678,22480151-22480297,22480763-22480864,
           22480932-22481564
          Length = 1170

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 14/53 (26%), Positives = 24/53 (45%)
 Frame = +3

Query: 240 GSDCKSESGSNTDSEMAATYPHEDAADLAYKKSEETYQEWDKYWSEVMNSRSD 398
           G+   SESGSNT S     Y     A+      E+  ++W+++   +    S+
Sbjct: 222 GTATVSESGSNTPSIAEGLYEPHSQAESWQDDLEQERRDWEQFSHAITGEESE 274


>08_01_0941 -
           9301603-9301788,9301866-9301958,9302060-9302120,
           9302397-9302648,9302903-9303720,9303993-9304490
          Length = 635

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 25/91 (27%), Positives = 36/91 (39%), Gaps = 5/91 (5%)
 Frame = +3

Query: 258 ESGSNTDSEMAATYPHEDAADLAYKKSEETYQEWDKYWSEVMNSRSDSILTITQGLPMNW 437
           ++G    S  A   P++    L  K S E  Q   KY     N++    L  T   P   
Sbjct: 18  KTGRTPFSTYANITPNQWEDFLTLKNSPEEIQRSQKYSELAKNNKFPHRLGFTGYAPKVE 77

Query: 438 ELSKAAEEMKN-----NITNGTSKSRRWVFA 515
           + +K  EEM+       +   T +SR WV A
Sbjct: 78  QWTKEGEEMRKAGLPVPMEKWTQRSRNWVRA 108


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,371,430
Number of Sequences: 37544
Number of extensions: 377696
Number of successful extensions: 1306
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1305
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)