Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30j15
(688 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29154-3|AAA68419.2| 283|Caenorhabditis elegans Hypothetical pr... 53 2e-07
U28929-2|AAN63411.1| 306|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z81086-7|CAB03118.2| 316|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z95619-3|CAB54269.1| 490|Caenorhabditis elegans Hypothetical pr... 32 0.44
Z95619-2|CAB09114.1| 450|Caenorhabditis elegans Hypothetical pr... 32 0.44
Z49125-6|CAA88937.2| 776|Caenorhabditis elegans Hypothetical pr... 31 0.58
U00056-2|AAN65309.2| 187|Caenorhabditis elegans Hypothetical pr... 31 0.77
AC024808-5|AAK29931.1| 789|Caenorhabditis elegans Hypothetical ... 30 1.8
U29536-2|AAA68790.1| 759|Caenorhabditis elegans Brf (transcript... 29 4.1
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z78012-7|CAB01411.1| 284|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z37983-7|CAA86058.1| 1106|Caenorhabditis elegans Hypothetical pr... 28 7.2
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 28 7.2
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 28 7.2
AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical ... 28 7.2
AL021566-4|CAA16505.1| 336|Caenorhabditis elegans Hypothetical ... 28 7.2
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 28 7.2
>U29154-3|AAA68419.2| 283|Caenorhabditis elegans Hypothetical
protein T07F12.1 protein.
Length = 283
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/64 (42%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +3
Query: 501 RWVFALRHGERVDLTYGP---WVPHCFENDTYVRKDLNLPLKLAHRAGGKGGYVKDTPLT 671
R VF +RHGER D +G W+ Y D+NLP L RA G G+ DTPLT
Sbjct: 4 RRVFIIRHGERCDFAFGKSGLWINSFDSRGRYRPLDINLPRTLPKRADGWQGFAADTPLT 63
Query: 672 RLGW 683
+G+
Sbjct: 64 EIGY 67
>U28929-2|AAN63411.1| 306|Caenorhabditis elegans Hypothetical
protein F09C12.8 protein.
Length = 306
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +3
Query: 507 VFALRHGERVDLTYGPWVPHCFENDTYVRKDLNLPLKLAHRAGGKGGYVKDTPLTRLG 680
+ +RH ERVD W+ C + Y DLN+P +L + K Y +DT +TR G
Sbjct: 48 MMVMRHSERVDDCCPGWIEKCNKEGKYEPFDLNMPTRLPIQRPLK-DYTRDTCITRSG 104
>Z81086-7|CAB03118.2| 316|Caenorhabditis elegans Hypothetical
protein F53B6.7 protein.
Length = 316
Score = 33.1 bits (72), Expect = 0.19
Identities = 28/101 (27%), Positives = 41/101 (40%), Gaps = 3/101 (2%)
Frame = +3
Query: 387 SRSDSILTITQGLPMNWELSKAAEEMKNNITNGTSKSRRW-VFALRHGERVDLTYGPWVP 563
+R DS +I + E A E+ + + R + A+ H E + L + WV
Sbjct: 14 NRRDSTSSIGASTYSSEEKPNAGEKFLTELAHIDQPGRELTIVAMSHAESMGLIFPNWVR 73
Query: 564 HCFEND--TYVRKDLNLPLKLAHRAGGKGGYVKDTPLTRLG 680
C+ Y D+N+P KL R Y D PLT G
Sbjct: 74 VCYRRGPMEYHPYDMNMPPKLVPRP--PLHYKFDPPLTERG 112
>Z95619-3|CAB54269.1| 490|Caenorhabditis elegans Hypothetical
protein H21P03.3b protein.
Length = 490
Score = 31.9 bits (69), Expect = 0.44
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = -3
Query: 356 FLVRFLGLLVCQIGGVFVRICRGHFTIGV 270
+++ +L LVC +G +F+ + GH+TI V
Sbjct: 356 YILHWLSWLVCSVGVIFLVLSHGHYTIDV 384
>Z95619-2|CAB09114.1| 450|Caenorhabditis elegans Hypothetical
protein H21P03.3a protein.
Length = 450
Score = 31.9 bits (69), Expect = 0.44
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = -3
Query: 356 FLVRFLGLLVCQIGGVFVRICRGHFTIGV 270
+++ +L LVC +G +F+ + GH+TI V
Sbjct: 316 YILHWLSWLVCSVGVIFLVLSHGHYTIDV 344
>Z49125-6|CAA88937.2| 776|Caenorhabditis elegans Hypothetical
protein C47G2.5a protein.
Length = 776
Score = 31.5 bits (68), Expect = 0.58
Identities = 20/72 (27%), Positives = 32/72 (44%)
Frame = +3
Query: 255 SESGSNTDSEMAATYPHEDAADLAYKKSEETYQEWDKYWSEVMNSRSDSILTITQGLPMN 434
SE S S +A+TYP + + A+ + EE EW W V ++T T P N
Sbjct: 624 SEKASEPPSVVASTYPQQTNGNQAFLEQEEGDGEW--VWPTVPPLGETEVVTQTGHRPEN 681
Query: 435 WELSKAAEEMKN 470
+ + A + +
Sbjct: 682 NWVDETAPDFSH 693
>U00056-2|AAN65309.2| 187|Caenorhabditis elegans Hypothetical
protein R05H11.2 protein.
Length = 187
Score = 31.1 bits (67), Expect = 0.77
Identities = 24/88 (27%), Positives = 42/88 (47%)
Frame = +3
Query: 243 SDCKSESGSNTDSEMAATYPHEDAADLAYKKSEETYQEWDKYWSEVMNSRSDSILTITQG 422
SDC S SGS + S M ++ P ++ ++ Y + +E E K V DS+ I +
Sbjct: 69 SDCSSVSGSPSSSTMTSSPPPQNFFNI-YDRLKEYISEVPKD-PVVCQILLDSLAQIIEL 126
Query: 423 LPMNWELSKAAEEMKNNITNGTSKSRRW 506
+L + E++K +N + S +W
Sbjct: 127 ERQLADLEQKTEDLKMRQSNTPTTSAKW 154
>AC024808-5|AAK29931.1| 789|Caenorhabditis elegans Hypothetical
protein Y53G8AM.8 protein.
Length = 789
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 495 SRRWVFALRHGERVDLTYGPWVPHCFENDTYVRKD 599
S W+ A + R+DL P C+END Y D
Sbjct: 590 SEGWLDAFKRRHRIDLKSMTGYPVCYENDMYEEVD 624
>U29536-2|AAA68790.1| 759|Caenorhabditis elegans Brf (transcription
factor) homologprotein 1 protein.
Length = 759
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +3
Query: 252 KSESGSNTDSEMAATYPHEDAADLAYKKSEETYQEWDKYWSEVMNSRSDSILTITQGLPM 431
++E + ++ H +AA +K + + + + SE + +D + T+T+ +
Sbjct: 304 EAEQAESMKEQLGEMEAHVEAALDKKRKEKFSKSPYARMISENLGKENDKMQTLTETVVE 363
Query: 432 NWELSKAAEEM-KNNITN 482
+ L K A+EM +N I N
Sbjct: 364 SSGLEKGADEMVRNEIIN 381
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 6/49 (12%)
Frame = +3
Query: 267 SNTDSEMAATYPHEDAADLAYKK------SEETYQEWDKYWSEVMNSRS 395
+N DSE+ P DAA + KK +E EW K W + M +S
Sbjct: 4560 ANLDSELREQQPEVDAACKSAKKGARNPAAEMLSTEWKKLWLDAMGLQS 4608
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 6/49 (12%)
Frame = +3
Query: 267 SNTDSEMAATYPHEDAADLAYKK------SEETYQEWDKYWSEVMNSRS 395
+N DSE+ P DAA + KK +E EW K W + M +S
Sbjct: 4560 ANLDSELREQQPEVDAACKSAKKGARNPAAEMLSTEWKKLWLDAMGLQS 4608
>Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 6/49 (12%)
Frame = +3
Query: 267 SNTDSEMAATYPHEDAADLAYKK------SEETYQEWDKYWSEVMNSRS 395
+N DSE+ P DAA + KK +E EW K W + M +S
Sbjct: 4015 ANLDSELREQQPEVDAACKSAKKGARNPAAEMLSTEWKKLWLDAMGLQS 4063
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 6/49 (12%)
Frame = +3
Query: 267 SNTDSEMAATYPHEDAADLAYKK------SEETYQEWDKYWSEVMNSRS 395
+N DSE+ P DAA + KK +E EW K W + M +S
Sbjct: 4560 ANLDSELREQQPEVDAACKSAKKGARNPAAEMLSTEWKKLWLDAMGLQS 4608
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 6/49 (12%)
Frame = +3
Query: 267 SNTDSEMAATYPHEDAADLAYKK------SEETYQEWDKYWSEVMNSRS 395
+N DSE+ P DAA + KK +E EW K W + M +S
Sbjct: 4560 ANLDSELREQQPEVDAACKSAKKGARNPAAEMLSTEWKKLWLDAMGLQS 4608
>Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 6/49 (12%)
Frame = +3
Query: 267 SNTDSEMAATYPHEDAADLAYKK------SEETYQEWDKYWSEVMNSRS 395
+N DSE+ P DAA + KK +E EW K W + M +S
Sbjct: 4015 ANLDSELREQQPEVDAACKSAKKGARNPAAEMLSTEWKKLWLDAMGLQS 4063
>Z78012-7|CAB01411.1| 284|Caenorhabditis elegans Hypothetical
protein C52E4.7 protein.
Length = 284
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/59 (22%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +3
Query: 507 VFALRHGERVDLTYGPWVPHC-FENDTYVRKDLNLPLKLAHRAGGKGGYVKDTPLTRLG 680
+ +R E ++ + W + + Y D+N P++L R Y D P+ G
Sbjct: 34 IIVMRCAETINEIFSDWTKRANLDENKYTPFDVNAPIELPRRTDMLKSYNLDPPINETG 92
>Z37983-7|CAA86058.1| 1106|Caenorhabditis elegans Hypothetical protein
B0393.5 protein.
Length = 1106
Score = 27.9 bits (59), Expect = 7.2
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +1
Query: 256 LNRVRTPIVKWPRHILTKTPPIWHTRSPRK 345
+ TP+ + P+ + +TPP+++T P K
Sbjct: 972 IGETTTPVSQRPKFVTVQTPPLFYTAPPIK 1001
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 6/49 (12%)
Frame = +3
Query: 267 SNTDSEMAATYPHEDAADLAYKK------SEETYQEWDKYWSEVMNSRS 395
+N DSE+ P DAA + KK +E EW K W + M +S
Sbjct: 4560 ANLDSELREQQPEVDAACKSAKKGARNPAAEMLSTEWKKLWLDAMGLQS 4608
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 6/49 (12%)
Frame = +3
Query: 267 SNTDSEMAATYPHEDAADLAYKK------SEETYQEWDKYWSEVMNSRS 395
+N DSE+ P DAA + KK +E EW K W + M +S
Sbjct: 4560 ANLDSELREQQPEVDAACKSAKKGARNPAAEMLSTEWKKLWLDAMGLQS 4608
>AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 6/49 (12%)
Frame = +3
Query: 267 SNTDSEMAATYPHEDAADLAYKK------SEETYQEWDKYWSEVMNSRS 395
+N DSE+ P DAA + KK +E EW K W + M +S
Sbjct: 4015 ANLDSELREQQPEVDAACKSAKKGARNPAAEMLSTEWKKLWLDAMGLQS 4063
>AL021566-4|CAA16505.1| 336|Caenorhabditis elegans Hypothetical
protein F08E10.6 protein.
Length = 336
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 416 RYGEYAVASRIHYFAPIFIPFLVRFLGLLV 327
R+ Y SR YF IPF+ ++G+L+
Sbjct: 141 RFRIYRKTSRFAYFTYFLIPFIAAYVGMLM 170
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 6/49 (12%)
Frame = +3
Query: 267 SNTDSEMAATYPHEDAADLAYKK------SEETYQEWDKYWSEVMNSRS 395
+N DSE+ P DAA + KK +E EW K W + M +S
Sbjct: 4560 ANLDSELREQQPEVDAACKSAKKGARNPAAEMLSTEWKKLWLDAMGLQS 4608
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,460,667
Number of Sequences: 27780
Number of extensions: 314245
Number of successful extensions: 1112
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1107
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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