Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30j15
(688 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 27 0.13
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 27 0.22
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 24 1.2
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 24 1.6
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 23 2.1
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 23 2.1
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 23 2.1
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 23 2.1
M12598-1|AAA27733.1| 77|Apis mellifera protein ( Bee preprosec... 22 4.8
AY082691-1|AAL92482.1| 77|Apis mellifera preprosecapin protein. 21 8.3
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 21 8.3
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 27.5 bits (58), Expect = 0.13
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +1
Query: 298 ILTKTPPIWHTRSPRKRTRNG 360
I + PP WHTRS KR G
Sbjct: 608 ITIQEPPQWHTRSTEKRVSAG 628
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 26.6 bits (56), Expect = 0.22
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -1
Query: 268 EPDSDLQSEPNTRHKTIKYTVNTIMSVV 185
EP SD+ R KT+ YTVN I+ V
Sbjct: 234 EPYSDITFNITMRRKTLFYTVNLIIPCV 261
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 24.2 bits (50), Expect = 1.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -1
Query: 268 EPDSDLQSEPNTRHKTIKYTVNTIMSVV 185
EP D+ R KT+ YTVN I+ V
Sbjct: 221 EPYPDIVFNITLRRKTLFYTVNLIIPCV 248
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 23.8 bits (49), Expect = 1.6
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -1
Query: 268 EPDSDLQSEPNTRHKTIKYTVNTIMSVV 185
EP D+ R KT+ YTVN I+ V
Sbjct: 220 EPYPDIFFNITLRRKTLFYTVNLIVPCV 247
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 23.4 bits (48), Expect = 2.1
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 271 FEPDSDLQSEPNTRHKTIKYTVNTIMSVVV 182
F ++D+ R KT+ YTVN I+ V+
Sbjct: 217 FPTETDITFYIIIRRKTLFYTVNLILPTVL 246
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.4 bits (48), Expect = 2.1
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -1
Query: 268 EPDSDLQSEPNTRHKTIKYTVNTIM 194
EP D+ R KT+ YTVN I+
Sbjct: 229 EPYLDITFNITMRRKTLFYTVNIII 253
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.4 bits (48), Expect = 2.1
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -1
Query: 268 EPDSDLQSEPNTRHKTIKYTVNTIM 194
EP D+ R KT+ YTVN I+
Sbjct: 229 EPYLDITFNITMRRKTLFYTVNIII 253
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 23.4 bits (48), Expect = 2.1
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -1
Query: 268 EPDSDLQSEPNTRHKTIKYTVNTIM 194
EP D+ R KT+ YTVN I+
Sbjct: 225 EPYLDITFNITMRRKTLFYTVNLII 249
>M12598-1|AAA27733.1| 77|Apis mellifera protein ( Bee
preprosecapin mRNA, complete cds. ).
Length = 77
Score = 22.2 bits (45), Expect = 4.8
Identities = 10/39 (25%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 171 NGRQTTTDMIVLTVY-FIVLCLVLGSDCKSESGSNTDSE 284
N + T +I + ++ F+V+ L++ S C++ S E
Sbjct: 3 NYSKNATHLITVLLFSFVVILLIIPSKCEAVSNDRQSLE 41
>AY082691-1|AAL92482.1| 77|Apis mellifera preprosecapin protein.
Length = 77
Score = 21.4 bits (43), Expect = 8.3
Identities = 9/32 (28%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +3
Query: 171 NGRQTTTDMIVLTVY-FIVLCLVLGSDCKSES 263
N + T +I + ++ F+V+ L++ S C++ S
Sbjct: 3 NYSKNATHLITVLLFSFVVILLIIPSKCEAVS 34
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 21.4 bits (43), Expect = 8.3
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +3
Query: 426 PMNWELSKAAEEMKNNITNGTSKSR 500
P W++ KAAEE ++ S R
Sbjct: 222 PFAWKILKAAEEAGFGVSEDLSGDR 246
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,460
Number of Sequences: 438
Number of extensions: 4153
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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