Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30j14
         (541 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58762-4|AAK39303.1|  109|Caenorhabditis elegans Hypothetical pr...   109   9e-25

>U58762-4|AAK39303.1|  109|Caenorhabditis elegans Hypothetical
           protein T27F7.3b protein.
          Length = 109

 Score =  109 bits (263), Expect = 9e-25
 Identities = 52/110 (47%), Positives = 71/110 (64%)
 Frame = +2

Query: 161 MSIXNLNTFXPFXDAIKSSEDDVQXGLVHVRIQQRNGRXTLTTXQGLSSEYDLXKIXRAC 340
           MSI NLN      + +++ ED V+ G+ H+RIQQR GR T+TT QG+ +EYDL +I +  
Sbjct: 1   MSIANLNRPADAFEQLET-EDGVRQGVCHIRIQQRTGRKTITTVQGIGTEYDLKRIVQYL 59

Query: 341 XKEFAXNGTVXEHPEYGEXLQLQGDQRXNICQXLTKSGLVKPEQLKXHGF 490
            K+ + NGT+ EHPEYGE +QL GDQR  +   L K G+V     + HGF
Sbjct: 60  KKKHSCNGTIVEHPEYGEVIQLTGDQRDKVKDFLIKVGIVNESNCRVHGF 109


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,385,391
Number of Sequences: 27780
Number of extensions: 111008
Number of successful extensions: 148
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 148
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1081316076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)