Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30j11
         (775 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC017959-1|AAH17959.1|  291|Homo sapiens chromosome 2 open readi...    44   5e-04
AK026208-1|BAB15393.1|  291|Homo sapiens protein ( Homo sapiens ...    44   5e-04
AC097717-3|AAY24163.1|  291|Homo sapiens unknown protein.              44   5e-04

>BC017959-1|AAH17959.1|  291|Homo sapiens chromosome 2 open reading
           frame 47 protein.
          Length = 291

 Score = 44.4 bits (100), Expect = 5e-04
 Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
 Frame = +2

Query: 488 KLILL--QNPIKWLMIKIDFSVLRNVWDPTFEEKDFKYGTKQAISRVTQVISDGQFSELN 661
           K+I+L   NPI W+  +I   ++   +D  F   +F  G KQA + V++++S  +F  L 
Sbjct: 109 KMIVLGFSNPINWVRTRIKAFLIWAYFDKEFSITEFSEGAKQAFAHVSKLLSQCKFDLLE 168

Query: 662 GLLTKAARLSLLRELDRNWSNKQRSLLALKHEDIXISS 775
            L+ K   L  L+E   +  +  ++ LA   ++I  +S
Sbjct: 169 ELVAKEV-LHALKEKVTSLPDNHKNALAANIDEIVFTS 205


>AK026208-1|BAB15393.1|  291|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22555 fis, clone HSI01193. ).
          Length = 291

 Score = 44.4 bits (100), Expect = 5e-04
 Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
 Frame = +2

Query: 488 KLILL--QNPIKWLMIKIDFSVLRNVWDPTFEEKDFKYGTKQAISRVTQVISDGQFSELN 661
           K+I+L   NPI W+  +I   ++   +D  F   +F  G KQA + V++++S  +F  L 
Sbjct: 109 KMIVLGFSNPINWVRTRIKAFLIWAYFDKEFSITEFSEGAKQAFAHVSKLLSQCKFDLLE 168

Query: 662 GLLTKAARLSLLRELDRNWSNKQRSLLALKHEDIXISS 775
            L+ K   L  L+E   +  +  ++ LA   ++I  +S
Sbjct: 169 ELVAKEV-LHALKEKVTSLPDNHKNALAANIDEIVFTS 205


>AC097717-3|AAY24163.1|  291|Homo sapiens unknown protein.
          Length = 291

 Score = 44.4 bits (100), Expect = 5e-04
 Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
 Frame = +2

Query: 488 KLILL--QNPIKWLMIKIDFSVLRNVWDPTFEEKDFKYGTKQAISRVTQVISDGQFSELN 661
           K+I+L   NPI W+  +I   ++   +D  F   +F  G KQA + V++++S  +F  L 
Sbjct: 109 KMIVLGFSNPINWVRTRIKAFLIWAYFDKEFSITEFSEGAKQAFAHVSKLLSQCKFDLLE 168

Query: 662 GLLTKAARLSLLRELDRNWSNKQRSLLALKHEDIXISS 775
            L+ K   L  L+E   +  +  ++ LA   ++I  +S
Sbjct: 169 ELVAKEV-LHALKEKVTSLPDNHKNALAANIDEIVFTS 205


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,790,804
Number of Sequences: 237096
Number of extensions: 1986437
Number of successful extensions: 3206
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3204
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9367263024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)