Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30j10
         (768 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           23   3.1  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   4.1  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   4.1  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    21   9.5  

>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +3

Query: 165 FXKMYASRNVVPRHVNCNSS 224
           +  + +S + +P H+NC+SS
Sbjct: 51  YKTLISSHDELPGHINCDSS 70


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +3

Query: 489 LLEVHNLVICHWCSILYCCDAQNESSQL 572
           ++E+HN+   H+  I+Y     +E+ +L
Sbjct: 283 IMELHNIEGTHYVKIVYYLGIPSEAREL 310


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +3

Query: 489 LLEVHNLVICHWCSILYCCDAQNESSQL 572
           ++E+HN+   H+  I+Y     +E+ +L
Sbjct: 298 IMELHNIEGTHYVKIVYYLGIPSEAREL 325


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +3

Query: 642 ILHITLICLIRKNE*TYDIYY*NKFIIFTDY 734
           +LH  +IC + K+  +    Y  K  +F DY
Sbjct: 18  LLHGQVICFVCKDITSTSALYRLKLYLFCDY 48


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,882
Number of Sequences: 438
Number of extensions: 3395
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)