Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30j02
(642 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0796 + 27787401-27788831 32 0.34
02_02_0360 + 9400082-9400524,9406729-9406936 31 0.59
11_01_0199 + 1563483-1563572,1563673-1563852,1564091-1564402,156... 31 1.0
12_02_0476 + 19493278-19493349,19493595-19494209,19494352-194945... 30 1.8
09_04_0518 - 18261420-18261953,18262054-18262626,18262736-182629... 30 1.8
05_07_0267 + 28818396-28818513,28819292-28819697,28819796-288199... 30 1.8
08_02_0864 + 21994286-21994989,21996257-21996958,21997221-219973... 29 2.4
10_08_0702 + 19978917-19979243,19979350-19979724 28 5.5
04_03_0181 - 12327281-12328620,12330922-12331015,12331079-123311... 28 7.2
01_07_0061 + 40818077-40818241,40818494-40818716,40819015-408192... 28 7.2
02_02_0326 - 8976913-8976963,8977453-8977521,8978247-8978438,897... 27 9.6
>03_05_0796 + 27787401-27788831
Length = 476
Score = 32.3 bits (70), Expect = 0.34
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 470 NDNIPGFIEASAAKADEESNAADAGCHKCLEKGKVCMS 583
ND I G + AS+ D + HKC E GKVC++
Sbjct: 380 NDKIAGVVVASSHDGDSDVGKMKIVQHKCDECGKVCLT 417
>02_02_0360 + 9400082-9400524,9406729-9406936
Length = 216
Score = 31.5 bits (68), Expect = 0.59
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +2
Query: 257 ESTENFHFNGDEPTEKVSNKTNKNITQHESVSNANRRAIAEDESNVPFNDRDDINEPN 430
ES E+ NGD+ E ++ T + ++ E VSN + +D + + DD PN
Sbjct: 153 ESEEDDDDNGDDEEEVSNDDTTEEVSDEEEVSNDDTTEEEDDLEDDDKSSSDDDEAPN 210
>11_01_0199 +
1563483-1563572,1563673-1563852,1564091-1564402,
1564753-1564800,1565205-1565438,1565632-1566219
Length = 483
Score = 30.7 bits (66), Expect = 1.0
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +2
Query: 287 DEPTEKVSNKTNKNITQHES-VSNANRRAIAEDESNVPFNDRDDINEPNIEFGKNEIIGS 463
D P +K N+ ++ + + V AN A + + V + +D+I+E G EII S
Sbjct: 387 DNPDDKNRNEDDRLVPFASTWVQQANEGARTSEIATVEY--KDEISED----GGKEIISS 440
Query: 464 VINDNIPGFIEASAAKADEESNAADAG 544
+ IEA+AA +++ESN AG
Sbjct: 441 NTSSEQTS-IEANAAASEDESNEGIAG 466
>12_02_0476 +
19493278-19493349,19493595-19494209,19494352-19494519,
19494677-19494868,19495604-19495672,19496461-19496544
Length = 399
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/76 (25%), Positives = 32/76 (42%)
Frame = +2
Query: 101 IHSVVHRSAGSDTVSSYERHNDEKPKSISFIQRLPADRAEIT*RSLVNTNVYESTENFHF 280
++ VV R D + + +KP ++ FI+ +P D + LV F
Sbjct: 230 VNCVVMRGMNDDEICDFVEMTRDKPVNVRFIEFMPFDGNVWNVKKLVPYAEIMDKVRQRF 289
Query: 281 NGDEPTEKVSNKTNKN 328
NG E + ++T KN
Sbjct: 290 NGVERLQDHPSETAKN 305
>09_04_0518 -
18261420-18261953,18262054-18262626,18262736-18262948,
18263379-18263510,18263591-18263731,18263899-18264120
Length = 604
Score = 29.9 bits (64), Expect = 1.8
Identities = 22/98 (22%), Positives = 47/98 (47%)
Frame = +2
Query: 104 HSVVHRSAGSDTVSSYERHNDEKPKSISFIQRLPADRAEIT*RSLVNTNVYESTENFHFN 283
+++ RS + S HN PK SFI+ L + E ++++ + E + H
Sbjct: 44 YNIEPRSPAAYFSESEGHHNLCSPKEWSFIKNLYEEMRERIDSAVMSGKIPEEIKLKHKG 103
Query: 284 GDEPTEKVSNKTNKNITQHESVSNANRRAIAEDESNVP 397
DE ++++K ++ I Q + ++ A+ +D + +P
Sbjct: 104 FDEWNSEMTSKNHQPIVQ-VLIDGKSQNAVDDDGNVLP 140
>05_07_0267 +
28818396-28818513,28819292-28819697,28819796-28819973,
28820414-28820553,28820629-28821874,28821952-28822052,
28822170-28822314,28822755-28822823,28822910-28822955,
28823049-28823422,28823622-28823701,28823813-28823948,
28824199-28824358,28824582-28824664,28825417-28825545
Length = 1136
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -1
Query: 330 MFLLVLLETFSVGSSPLKWKF-SVDS*TFVFTNDLQVISARS 208
++L LL+ +V S W F SVDS T++FT+ L VI S
Sbjct: 775 IYLKKLLQIPTVSSCIEVWDFLSVDSQTYIFTDTLSVIQTLS 816
>08_02_0864 + 21994286-21994989,21996257-21996958,21997221-21997374,
21997494-21997838,21998323-21999240,21999312-21999640,
21999709-21999832,21999901-22000071,22000188-22001648,
22002647-22002910,22003866-22004189
Length = 1831
Score = 29.5 bits (63), Expect = 2.4
Identities = 22/77 (28%), Positives = 41/77 (53%)
Frame = +2
Query: 308 SNKTNKNITQHESVSNANRRAIAEDESNVPFNDRDDINEPNIEFGKNEIIGSVINDNIPG 487
+ K K+ E +SNA ++ + +S + ND++ N+P+ G + IG+ +N
Sbjct: 1226 TTKLEKSSKGSEVLSNAKEGSLKQSQSPLHANDKEP-NQPDQSNGNSSRIGAGLNG---- 1280
Query: 488 FIEASAAKADEESNAAD 538
+E + AK + SN+AD
Sbjct: 1281 -MEDAIAKIN-HSNSAD 1295
>10_08_0702 + 19978917-19979243,19979350-19979724
Length = 233
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 494 EASAAKADEESNAADAGCHKCLEKGKVCMSECPRAK 601
+AS+ K +EE + + LEK +V +SEC + K
Sbjct: 116 QASSGKTEEEKAEGEKKVVEALEKMEVGLSECSKGK 151
>04_03_0181 -
12327281-12328620,12330922-12331015,12331079-12331183,
12331404-12332592,12333268-12333461
Length = 973
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 308 SNKTNKNITQHESVSNANRRAIAEDESNVPFNDRDDINEPNIE 436
S+K Q ++A + EDE ++ F + + I+ P+IE
Sbjct: 289 SSKARSGAPQRAMAASATSKEEKEDEPSMQFEESESISTPSIE 331
>01_07_0061 +
40818077-40818241,40818494-40818716,40819015-40819263,
40819455-40819505,40819611-40819871,40819994-40820046,
40820234-40820348,40820475-40820696,40821280-40822253
Length = 770
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/68 (23%), Positives = 33/68 (48%)
Frame = +3
Query: 27 KTANTYLSMLIYKKVLCRFPAMITRFTQLYIGLLVAIPCLATNGTMTKNLKVLVSSNDYP 206
K +N Y++ L K+ L R P + +++L G+ +P L ++ V++S P
Sbjct: 534 KVSNNYVAELAVKQNLARLPGIGFLYSELVQGIPPILPHLVEKVPSIHSVLVIISIKYLP 593
Query: 207 PTALKLLE 230
+ ++ E
Sbjct: 594 ISKIETKE 601
>02_02_0326 -
8976913-8976963,8977453-8977521,8978247-8978438,
8978597-8978764,8978902-8979513,8979765-8979815
Length = 380
Score = 27.5 bits (58), Expect = 9.6
Identities = 18/76 (23%), Positives = 31/76 (40%)
Frame = +2
Query: 101 IHSVVHRSAGSDTVSSYERHNDEKPKSISFIQRLPADRAEIT*RSLVNTNVYESTENFHF 280
++ VV R D + + +KP ++ FI+ +P D + LV F
Sbjct: 222 VNCVVMRGMNDDEICDFVEMTRDKPVNVRFIEFMPFDGNVWNVKKLVPYAEMMDKVRQRF 281
Query: 281 NGDEPTEKVSNKTNKN 328
G E + ++T KN
Sbjct: 282 KGVERLQDHPSETAKN 297
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,764,277
Number of Sequences: 37544
Number of extensions: 278201
Number of successful extensions: 743
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 742
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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