Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30j02
         (642 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    24   1.1  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    24   1.4  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    23   2.5  
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              23   3.3  
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    22   5.8  
AY352277-2|AAQ67419.1|   88|Apis mellifera EX4.8-5.8 protein.          22   5.8  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    22   5.8  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   7.7  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   7.7  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -3

Query: 193  DETNTFRFFVIVPFVARHGIATSRPM 116
            +E +    + +VPFV+ H I   RP+
Sbjct: 1028 EEKSRLFHYSVVPFVSNHDILNLRPL 1053



 Score = 23.4 bits (48), Expect = 1.9
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +3

Query: 219  KLLEDHW*IQMFTNQQRTSISMATSQRRKFPIKLTRTSHNTSPYRTL 359
            K L+DH  I+    QQR  IS + S R    +      HN + + T+
Sbjct: 1643 KSLQDHDCIRQERTQQRNVISDSESGRLDTEMSTWGYHHNVNKHCTI 1689


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 15/67 (22%), Positives = 30/67 (44%)
 Frame = +2

Query: 230 RSLVNTNVYESTENFHFNGDEPTEKVSNKTNKNITQHESVSNANRRAIAEDESNVPFNDR 409
           + +VN +      NF   G    E + N    N  Q++++ N N     ++++N   N +
Sbjct: 384 QKIVNDDFNFDDVNFRILGANVKELIRNTHCVNNNQNDNIQNTNN----QNDNNQKNNKK 439

Query: 410 DDINEPN 430
           +  N+ N
Sbjct: 440 NANNQKN 446


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/18 (50%), Positives = 14/18 (77%), Gaps = 1/18 (5%)
 Frame = -3

Query: 454 NFIFTELYIWFIN-IIPV 404
           +FI + + +WFIN IIP+
Sbjct: 397 SFIVSTILLWFINKIIPI 414


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +2

Query: 182 ISFIQRLPADRAEI 223
           ++F QR+PA RAE+
Sbjct: 95  LTFFQRIPAYRAEV 108


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 527 NAADAGCHKCLEKGK 571
           +A   GC+KC EK K
Sbjct: 66  DALSTGCNKCNEKQK 80


>AY352277-2|AAQ67419.1|   88|Apis mellifera EX4.8-5.8 protein.
          Length = 88

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 233 SLVNTNVYESTENFHFNGDEPTEKVSNKT 319
           ++ N+N+ E  EN  F+ D+P    S  T
Sbjct: 3   TMENSNMTEFEENVSFDIDDPDFAPSKNT 31


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 527 NAADAGCHKCLEKGK 571
           +A   GC+KC EK K
Sbjct: 66  DALSTGCNKCNEKQK 80


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +3

Query: 207 PTALKLLEDHW 239
           P ALKLL+++W
Sbjct: 354 PEALKLLDENW 364


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +3

Query: 207 PTALKLLEDHW 239
           P ALKLL+++W
Sbjct: 354 PEALKLLDENW 364


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,339
Number of Sequences: 438
Number of extensions: 3501
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19315974
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)