Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30i24
(667 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.028
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 30 0.34
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 29 0.46
SPAPJ698.03c |prp12|sap130|U2 snRNP-associated protein Sap130 |S... 28 1.1
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 1.4
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 28 1.4
SPBC649.04 |uvi15||UV-induced protein Uvi15|Schizosaccharomyces ... 27 2.4
SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces pomb... 27 2.4
SPCC584.15c |||arrestin/PY protein 2|Schizosaccharomyces pombe|c... 26 4.2
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 5.6
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 26 5.6
SPCC1840.04 |||caspase|Schizosaccharomyces pombe|chr 3|||Manual 26 5.6
SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 25 9.8
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 25 9.8
SPAC328.05 |||RNA-binding protein involved in export of mRNAs|Sc... 25 9.8
SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase ... 25 9.8
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.5 bits (73), Expect = 0.028
Identities = 28/87 (32%), Positives = 32/87 (36%), Gaps = 4/87 (4%)
Frame = +3
Query: 174 PYPA-SGWKPTGAPFTLPNETPTDSYGPPEETADQSG--PYPPSGWKPDGPV-FVLPKQQ 341
P PA SG P P P S G P +G P PP P P V
Sbjct: 1151 PVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPV 1210
Query: 342 SPPATSYGVPDNAYGAPATDAPTTDNP 422
PP+T+ VP + G P PT P
Sbjct: 1211 PPPSTAPPVPTPSAGLPPVPVPTAKAP 1237
Score = 28.7 bits (61), Expect = 0.80
Identities = 30/115 (26%), Positives = 43/115 (37%), Gaps = 7/115 (6%)
Frame = +3
Query: 174 PYPASGWKPTGAPFTLPNETPTDSYGPPEETADQSGP-YPPSGWKPDGPVFVLPKQQ-SP 347
P P++ P P T P P + PP + P PP P + +P +P
Sbjct: 1025 PLPSADAPPIPVPSTAP-PVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAP 1083
Query: 348 PATSYG----VPDNAYGAPATDAPTTDNPQAERLEGPVEVQK-SVGSYFVLLPNG 497
P + VP + AP P+ P G V K SV + V +P+G
Sbjct: 1084 PVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSG 1138
Score = 27.5 bits (58), Expect = 1.8
Identities = 23/85 (27%), Positives = 32/85 (37%), Gaps = 2/85 (2%)
Frame = +3
Query: 174 PYPASGWKPTGAPFTLPNETPTDSYGPP-EETADQSGPYP-PSGWKPDGPVFVLPKQQSP 347
P P+ P P P S PP + + + P P PSG P V
Sbjct: 1095 PKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPA 1154
Query: 348 PATSYGVPDNAYGAPATDAPTTDNP 422
P+ + VP + AP AP++ P
Sbjct: 1155 PSGAPPVPKPSVAAPPVPAPSSGIP 1179
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 29.9 bits (64), Expect = 0.34
Identities = 27/77 (35%), Positives = 30/77 (38%)
Frame = +3
Query: 174 PYPASGWKPTGAPFTLPNETPTDSYGPPEETADQSGPYPPSGWKPDGPVFVLPKQQSPPA 353
P P + PT AP +P P G P P PP G GP P PPA
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPP------PPPPPGVAGAGPP---PPPPPPPA 784
Query: 354 TSYGVPDNAYGAPATDA 404
S G + Y APA A
Sbjct: 785 VSAG--GSRYYAPAPQA 799
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 29.5 bits (63), Expect = 0.46
Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Frame = +3
Query: 201 TGAPFTLPNETPTDSYGPPEETADQSGPYPPSGWKPDGPVFVLPKQQS--PPATSYGVPD 374
+ AP P + +YG + PYPP G P P + P Q + P +Y P
Sbjct: 81 SAAPAPAPAASQNRAYGAAPQ------PYPPQGGYPQQP-YYYPNQPNYYPAQPAYAQP- 132
Query: 375 NAYGAPATDA 404
Y PAT A
Sbjct: 133 -VYAQPATSA 141
>SPAPJ698.03c |prp12|sap130|U2 snRNP-associated protein Sap130
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1206
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +3
Query: 453 VQKSVGSYFVLLPNGQLQRVEFMTENDIQNMKYSARLQFREPAPLIV 593
+ K GS+F LL G ++ E+D Q RL++ + PL V
Sbjct: 310 LHKMKGSFFYLLQTGDGDLLKLTIEHDGQGNVVELRLKYFDTVPLAV 356
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.9 bits (59), Expect = 1.4
Identities = 24/101 (23%), Positives = 40/101 (39%), Gaps = 1/101 (0%)
Frame = +3
Query: 174 PYPASGWKPTGAPFTLPNETPTDSYGPPEETADQSGPYPPSGWKPDGPVFVLPKQQSPPA 353
P P S P +P+ P+ + PP A + P S P F +PPA
Sbjct: 1479 PAPVSQLPPAVPNVPVPSMIPSVAQQPPSSVAPATA--PSSTLPPSQSSFAHVPSPAPPA 1536
Query: 354 TSYGVPDNAYGAPATDA-PTTDNPQAERLEGPVEVQKSVGS 473
+ APA ++ P +P A + PV+ +++ +
Sbjct: 1537 PQHPSAAALSSAPADNSMPHRSSPYAP--QEPVQKPQAINN 1575
Score = 26.6 bits (56), Expect = 3.2
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
Frame = +3
Query: 240 DSYGPPEETAD---QSGPYP-PSGWKPDGPV--FVLPKQQSPPATSYGVPDNAYG 386
DSYG P Q YP ++PDG +LP QQS PAT + +N +G
Sbjct: 25 DSYGMPINQGGMNYQQQTYPYQQPYQPDGYAGNTMLPFQQSQPATQF---NNGFG 76
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 27.9 bits (59), Expect = 1.4
Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
Frame = +3
Query: 198 PTGAPFTLPNETPTDSYGPPEETADQSGPYPP-SGWKPDGPVFVLPKQQSPPATSYGVPD 374
PTG +L TP PP T+ S P PP S D LP + TS +P
Sbjct: 123 PTGGSSSL--STPITPTVPPTSTSSTSIPIPPTSTSSTDTNSNPLPTTSTSCTTSTSIPP 180
Query: 375 NAYGAPATDAPTT 413
G+ + P T
Sbjct: 181 TG-GSSSLSTPIT 192
Score = 27.9 bits (59), Expect = 1.4
Identities = 23/76 (30%), Positives = 29/76 (38%), Gaps = 1/76 (1%)
Frame = +3
Query: 198 PTGAPFTLPNETPTDSYGPPEETADQSGPYPP-SGWKPDGPVFVLPKQQSPPATSYGVPD 374
PTG +L TP PP T+ S P PP S D LP + TS +P
Sbjct: 180 PTGGSSSL--STPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTSIPT 237
Query: 375 NAYGAPATDAPTTDNP 422
+ +T T P
Sbjct: 238 GGSSSLSTPITPTVPP 253
Score = 27.5 bits (58), Expect = 1.8
Identities = 18/58 (31%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Frame = +3
Query: 201 TGAPFTLPNETPTDSYGPPEETADQSGPYPPSGWKPDG-PVFVLPKQQSPPATSYGVP 371
T P T + TP PP T+ S P PP+ G LP + TS +P
Sbjct: 289 TSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIP 346
Score = 27.1 bits (57), Expect = 2.4
Identities = 27/101 (26%), Positives = 35/101 (34%), Gaps = 2/101 (1%)
Frame = +3
Query: 198 PTGAPFTLPNETPTDSYGPPEETADQSGPYPP-SGWKPDGPVFVLPKQQSPPATSYGVPD 374
PTG +L TP PP T+ S P PP S D LP + TS +P
Sbjct: 236 PTGGSSSL--STPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTSIPP 293
Query: 375 NAYG-APATDAPTTDNPQAERLEGPVEVQKSVGSYFVLLPN 494
P T + + P S G+ LP+
Sbjct: 294 TGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLPS 334
Score = 25.0 bits (52), Expect = 9.8
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +3
Query: 201 TGAPFTLPNETPTDSYGPPEETADQSGPYPPSGWKPDG 314
T P T + TP PP T+ S P PP+ G
Sbjct: 343 TSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTG 380
>SPBC649.04 |uvi15||UV-induced protein Uvi15|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 87
Score = 27.1 bits (57), Expect = 2.4
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
Frame = +3
Query: 243 SYGPPEETADQSGPYPPSGWKPDG-----PVFVLPKQQSPP 350
+Y PP++ Q G PP G+ G P++V Q S P
Sbjct: 25 NYYPPQQNYPQQGYAPPQGYPQGGYPAQQPMYVQQPQASDP 65
>SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 27.1 bits (57), Expect = 2.4
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 219 LPNETPTDSYGPPEETADQSGPYP 290
LP + +SY PPEE QS +P
Sbjct: 287 LPPPSHEESYNPPEEYLKQSSDFP 310
>SPCC584.15c |||arrestin/PY protein 2|Schizosaccharomyces pombe|chr
3|||Manual
Length = 594
Score = 26.2 bits (55), Expect = 4.2
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = +3
Query: 213 FTLPNETPTDS--YGPPEETADQSGPYPPSGWKPDGP 317
FT PN + +S +GP S P P SG +P P
Sbjct: 375 FTTPNLSRRNSSDFGPNSPVNIHSNPVPISGQQPSSP 411
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 25.8 bits (54), Expect = 5.6
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 249 GPPEETADQSGPYPPSGWKPDGPVFVLPKQQSPPATSYGVPDNAYGAPA 395
G E A+ SG S P+GP+ +P+ S S +++YG+ A
Sbjct: 439 GAAAEAAEHSGSGSDS--YPEGPLATIPESDSESMASDLAGESSYGSRA 485
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 25.8 bits (54), Expect = 5.6
Identities = 21/83 (25%), Positives = 26/83 (31%)
Frame = +3
Query: 198 PTGAPFTLPNETPTDSYGPPEETADQSGPYPPSGWKPDGPVFVLPKQQSPPATSYGVPDN 377
P AP P S PP PPS V +P + PP S N
Sbjct: 154 PASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVAN 213
Query: 378 AYGAPATDAPTTDNPQAERLEGP 446
P++ AP + E P
Sbjct: 214 TSSRPSSFAPPAGHAPNVTSESP 236
>SPCC1840.04 |||caspase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 425
Score = 25.8 bits (54), Expect = 5.6
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -2
Query: 510 PSAAVRWVTKRSMNQHSFAPPLDPP 436
P V ++ S N H++APP PP
Sbjct: 61 PMENVGHISLSSANSHAYAPPSGPP 85
>SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 513
Score = 25.0 bits (52), Expect = 9.8
Identities = 28/90 (31%), Positives = 34/90 (37%)
Frame = +3
Query: 288 PPSGWKPDGPVFVLPKQQSPPATSYGVPDNAYGAPATDAPTTDNPQAERLEGPVEVQKSV 467
PPS P F + SP +S P P PT+ Q P Q V
Sbjct: 215 PPSYAASTQPEF--QQTTSPIFSSSSTPPPP--PPRPSQPTSGESQNTNPRFPFSAQSFV 270
Query: 468 GSYFVLLPNGQLQRVEFMTENDIQNMKYSA 557
F + PNG L +V TEN QN + A
Sbjct: 271 ---FSVGPNGALHQVNTSTENP-QNAQAGA 296
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 25.0 bits (52), Expect = 9.8
Identities = 14/52 (26%), Positives = 21/52 (40%)
Frame = +1
Query: 127 PPRQIHRRKPLLNHQGRIQHLDGNPPGHLSHYPTKLPLIATDHLKKLPTKAG 282
PP + RKPL +Q PP +H P+ +H + P+ G
Sbjct: 52 PPTRRLPRKPLPFRSTSLQPPSSQPPAPPTHQREASPVKNIEHSESFPSVFG 103
>SPAC328.05 |||RNA-binding protein involved in export of
mRNAs|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 25.0 bits (52), Expect = 9.8
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 348 PATSYGVPDNAYGAPATDAPTTDNP 422
P G+P AY P PTT++P
Sbjct: 365 PTVLSGLPSVAYTPPVMHIPTTNSP 389
>SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase
Cho2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 905
Score = 25.0 bits (52), Expect = 9.8
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 267 ADQSGPYPPSGWKPDGPVFVLPKQQ 341
AD S P G P G VF+LPK+Q
Sbjct: 61 ADHSEP-ERYGCTPSGKVFLLPKEQ 84
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,041,458
Number of Sequences: 5004
Number of extensions: 69828
Number of successful extensions: 227
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 226
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 303841898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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