Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30i22
(633 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0851 - 21866088-21866210,21866311-21866413,21866531-218667... 47 1e-05
06_03_0983 - 26559772-26559915,26560149-26560251,26560335-265605... 44 1e-04
08_01_0214 - 1710317-1710443,1710839-1711047,1711161-1711420,171... 41 0.001
02_04_0049 + 19238794-19239003,19239359-19239505,19239595-192397... 40 0.001
04_03_0824 + 20086639-20087263,20087282-20087463,20087569-200877... 39 0.003
02_05_0403 - 28696043-28696153,28696245-28696347,28696443-286965... 38 0.007
02_01_0577 + 4280590-4281225,4281749-4282102,4282214-4282412,428... 34 0.11
11_01_0048 - 361999-362220,362321-362412,362499-362561,362606-36... 32 0.44
01_06_0271 - 28055367-28055402,28055503-28055622,28055710-280558... 32 0.44
08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,322... 31 0.58
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 31 0.58
03_06_0658 - 35335639-35335731,35335814-35335871,35336213-353363... 31 0.76
01_01_0363 + 2850954-2853675,2853819-2854225 28 5.4
>08_02_0851 -
21866088-21866210,21866311-21866413,21866531-21866744,
21866877-21867075,21867171-21868151
Length = 539
Score = 47.2 bits (107), Expect = 1e-05
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Frame = +3
Query: 132 FVFGDK--NVQVPAHLNFGQFMLEHIRQWNDQIAIENADTGEKLSYKEIAQYVVNLSASL 305
FVF + ++ +P HL ++ E + D+ + + TGE LS+ ++ ++A L
Sbjct: 8 FVFRSRLPDIAIPDHLPLHDYVFERLADRRDRACLIDGATGETLSFGDVDALSRRVAAGL 67
Query: 306 TSLGVGRGDTVALGSEKHNEFVPTLLAIVLTGATYT 413
+S+GV G TV L EF LA GA T
Sbjct: 68 SSIGVCHGSTVMLLLPNSVEFAVAFLASSRLGAVTT 103
>06_03_0983 -
26559772-26559915,26560149-26560251,26560335-26560548,
26563352-26563550,26564509-26564862,26565430-26566086
Length = 556
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/88 (28%), Positives = 40/88 (45%)
Frame = +3
Query: 150 NVQVPAHLNFGQFMLEHIRQWNDQIAIENADTGEKLSYKEIAQYVVNLSASLTSLGVGRG 329
++++P+HL + E + + + + + TG SY E+ + +A L LGVG+G
Sbjct: 22 DIEIPSHLTLQAYCFEKLPEVAARPCLIDGQTGAVYSYGEVEELSRRAAAGLRRLGVGKG 81
Query: 330 DTVALGSEKHNEFVPTLLAIVLTGATYT 413
D V EF T L GA T
Sbjct: 82 DVVMSLLRNCPEFAFTFLGAARLGAATT 109
>08_01_0214 -
1710317-1710443,1710839-1711047,1711161-1711420,
1711442-1711534,1711745-1711872,1711958-1712151,
1712288-1712385,1712548-1712658,1712782-1712950,
1713109-1713181,1713311-1713507
Length = 552
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/83 (26%), Positives = 40/83 (48%)
Frame = +3
Query: 252 KLSYKEIAQYVVNLSASLTSLGVGRGDTVALGSEKHNEFVPTLLAIVLTGATYTPYDLKV 431
+L+ +A L+A+L++LGV RG VA+ + E++ LA+ G P + +
Sbjct: 31 RLTGAGLADGARRLAAALSNLGVRRGHVVAVVAFNSIEYIELFLAVTYIGGIIAPLNYRW 90
Query: 432 GKASLKHKLSVVKPKYFIYSNKF 500
L +V+P FI+ +
Sbjct: 91 SFEEASQALELVQPTVFIFDGSY 113
>02_04_0049 +
19238794-19239003,19239359-19239505,19239595-19239750,
19239870-19239992,19240073-19240241,19240700-19240782,
19240917-19241018,19241104-19241192,19241317-19241407,
19241734-19241847,19242371-19242447,19242534-19242612,
19242710-19242778,19243022-19243197,19243309-19243365,
19243460-19243550,19243644-19243742,19243878-19244063
Length = 705
Score = 40.3 bits (90), Expect = 0.001
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Frame = +3
Query: 216 DQIAI--ENADTGE--KLSYKEIAQYVVNLSASLTSLGVGRGDTVALGSEKHNEFVPTLL 383
D+IA+ E + G+ KL+Y E+ V L+ L S+GVG+GD V + E +L
Sbjct: 143 DKIAMYWEGNEPGQDGKLTYSELLDRVCQLANYLKSVGVGKGDAVIIYLPMLLELPIAML 202
Query: 384 AIVLTGATYTPYDLKVGKASLKHKLSVVKPKYFIYSN 494
A GA ++ SL ++ KPK I N
Sbjct: 203 ACARIGAVHSVVFAGFSADSLAQRIVDCKPKLVITCN 239
>04_03_0824 +
20086639-20087263,20087282-20087463,20087569-20087724,
20087867-20087989,20088079-20088247,20088384-20088466,
20088641-20088742,20089246-20089359,20089735-20089811,
20089884-20089962,20090060-20090128,20090235-20090410,
20090460-20090561,20090678-20090768,20090878-20090976,
20091141-20091326
Length = 810
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/81 (30%), Positives = 37/81 (45%)
Frame = +3
Query: 252 KLSYKEIAQYVVNLSASLTSLGVGRGDTVALGSEKHNEFVPTLLAIVLTGATYTPYDLKV 431
KL+Y E+ V L+ L S+GVG+GD V + E +LA GA ++
Sbjct: 309 KLTYSELLNKVCQLANYLKSVGVGKGDAVVIYLPMLMELPIAMLACARIGAVHSVVFAGF 368
Query: 432 GKASLKHKLSVVKPKYFIYSN 494
+L ++ KPK I N
Sbjct: 369 SADALAQRIIDCKPKVVITCN 389
>02_05_0403 -
28696043-28696153,28696245-28696347,28696443-28696510,
28696582-28696727,28698038-28699124
Length = 504
Score = 37.9 bits (84), Expect = 0.007
Identities = 23/88 (26%), Positives = 37/88 (42%)
Frame = +3
Query: 150 NVQVPAHLNFGQFMLEHIRQWNDQIAIENADTGEKLSYKEIAQYVVNLSASLTSLGVGRG 329
++ +P+HL ++ + D + A TG ++ E +A+L LGVG G
Sbjct: 34 DIDIPSHLPLHEYCFARAAELPDAPCLIAAATGRTYTFAETRLLCRRAAAALHRLGVGHG 93
Query: 330 DTVALGSEKHNEFVPTLLAIVLTGATYT 413
D V + + EF A GA T
Sbjct: 94 DRVMVLLQNCVEFAVAFFAASFLGAVTT 121
>02_01_0577 +
4280590-4281225,4281749-4282102,4282214-4282412,
4284991-4285204,4285299-4285401,4285481-4285639
Length = 554
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/88 (21%), Positives = 37/88 (42%)
Frame = +3
Query: 150 NVQVPAHLNFGQFMLEHIRQWNDQIAIENADTGEKLSYKEIAQYVVNLSASLTSLGVGRG 329
++++ + ++ + + + + + TGE +Y E+ +A L +GVG+G
Sbjct: 18 DIEIDNSMTLQEYCFARMAEVGARPCLIDGQTGESYTYAEVESASRRAAAGLRRMGVGKG 77
Query: 330 DTVALGSEKHNEFVPTLLAIVLTGATYT 413
D V EF + L GA T
Sbjct: 78 DVVMSLLRNCPEFAFSFLGAARLGAATT 105
>11_01_0048 -
361999-362220,362321-362412,362499-362561,362606-362717,
363285-364090,368545-368806
Length = 518
Score = 31.9 bits (69), Expect = 0.44
Identities = 13/51 (25%), Positives = 28/51 (54%)
Frame = +3
Query: 12 VLFSTSITCFKLFLIGKKLPVFYFSSL*FKIYIKMPYNYNFVFGDKNVQVP 164
VLF+ + K++++G ++ + +S+ + PYN +F + N+ VP
Sbjct: 456 VLFNRQPSLHKMYIMGHRIKIMPYSTFHLNLSATSPYNADFDGDEMNMHVP 506
>01_06_0271 -
28055367-28055402,28055503-28055622,28055710-28055892,
28056006-28056145,28056347-28056595,28056706-28056823,
28056924-28056999,28057096-28057162,28057282-28057369,
28057506-28057616,28058127-28058221,28058305-28058344,
28058736-28058812,28058978-28059026,28059464-28059520,
28059624-28059713,28059833-28059896,28060076-28060245
Length = 609
Score = 31.9 bits (69), Expect = 0.44
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 255 LSYKEIAQYVVNLSASLTSLGVGRGDTVALGSEKHNEFVPTLLAIVLTGATYTP-YD 422
++YKE V+ + AS+ SLGVG+G + E+V ++ A G P YD
Sbjct: 85 ITYKEAYDTVIKVGASIRSLGVGKGGRCGIYGANCPEWVISMQACNAHGIYCVPLYD 141
>08_01_0364 -
3218309-3218414,3218882-3218941,3219898-3219969,
3220080-3223195,3223303-3223561,3223665-3223951,
3224029-3224364,3224463-3224604,3224690-3224910,
3224990-3225151,3225242-3225400,3225488-3225787,
3226306-3226569,3227370-3227453
Length = 1855
Score = 31.5 bits (68), Expect = 0.58
Identities = 13/51 (25%), Positives = 28/51 (54%)
Frame = +3
Query: 12 VLFSTSITCFKLFLIGKKLPVFYFSSL*FKIYIKMPYNYNFVFGDKNVQVP 164
VLF+ + K+ ++G ++ + +S+ + + PYN +F + N+ VP
Sbjct: 455 VLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 505
>05_01_0367 -
2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 31.5 bits (68), Expect = 0.58
Identities = 13/51 (25%), Positives = 28/51 (54%)
Frame = +3
Query: 12 VLFSTSITCFKLFLIGKKLPVFYFSSL*FKIYIKMPYNYNFVFGDKNVQVP 164
VLF+ + K+ ++G ++ + +S+ + + PYN +F + N+ VP
Sbjct: 493 VLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 543
>03_06_0658 -
35335639-35335731,35335814-35335871,35336213-35336355,
35336624-35336703,35336916-35337075,35337531-35337668,
35338487-35338567,35338640-35338693,35339192-35339297,
35339615-35339682,35340076-35340225,35340401-35340519,
35341151-35341362,35342118-35342205,35342365-35342479,
35343083-35343274,35343809-35344018
Length = 688
Score = 31.1 bits (67), Expect = 0.76
Identities = 16/68 (23%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Frame = +3
Query: 207 QWNDQIAIENA--DTGEKLSYKEIAQYVVNLSASLTSLGVGRGDTVALGSEKHNEFVPTL 380
++ D++A+ + + +L+YK++ Q +++ S L ++GV + +AL ++ ++
Sbjct: 112 KYADRVALVDPYHEPPSELTYKQLEQEILDFSQGLRAIGVAPDEKIALFADNSCRWLVAD 171
Query: 381 LAIVLTGA 404
I+ TGA
Sbjct: 172 QGIMATGA 179
>01_01_0363 + 2850954-2853675,2853819-2854225
Length = 1042
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -3
Query: 391 TIASKVGTNSLCFSDPSATVSPLPTPRLVKDAERFTTYCAIS 266
T AS G + LC P ++P P P + KD + Y ++
Sbjct: 624 TYASVAGNDKLCGGIPRLHLAPCPIPAVRKDRKERMKYLKVA 665
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,288,979
Number of Sequences: 37544
Number of extensions: 363545
Number of successful extensions: 865
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 865
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1549385732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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