Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30i22
(633 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41625-5|AAA83327.1| 700|Caenorhabditis elegans Suppressor of a... 42 4e-04
AY091467-1|AAM44123.1| 700|Caenorhabditis elegans SUR-5 protein. 42 4e-04
U40938-6|AAA81698.1| 655|Caenorhabditis elegans Hypothetical pr... 38 0.008
Z66495-9|CAH19100.1| 670|Caenorhabditis elegans Hypothetical pr... 34 0.074
Z66495-8|CAA91274.1| 680|Caenorhabditis elegans Hypothetical pr... 34 0.074
AF016449-14|AAG23991.1| 517|Caenorhabditis elegans Hypothetical... 33 0.17
Z70684-10|CAA94602.2| 684|Caenorhabditis elegans Hypothetical p... 33 0.22
Z81027-1|CAB02686.1| 566|Caenorhabditis elegans Hypothetical pr... 32 0.39
Z69883-4|CAA93742.2| 480|Caenorhabditis elegans Hypothetical pr... 32 0.39
U58758-13|AAB93427.1| 565|Caenorhabditis elegans Hypothetical p... 32 0.39
AF098989-3|AAK18953.2| 569|Caenorhabditis elegans Hypothetical ... 31 0.69
AL132902-6|CAC14421.1| 316|Caenorhabditis elegans Hypothetical ... 30 1.2
Z54282-1|CAA91056.2| 1201|Caenorhabditis elegans Hypothetical pr... 29 2.1
X58520-1|CAA41410.1| 1203|Caenorhabditis elegans zinc-finger pro... 29 2.1
AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical... 29 2.1
Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z81071-2|CAB03012.1| 618|Caenorhabditis elegans Hypothetical pr... 29 3.7
U97550-5|AAK18982.2| 497|Caenorhabditis elegans Hypothetical pr... 29 3.7
AL132948-37|CAD31830.2| 410|Caenorhabditis elegans Hypothetical... 29 3.7
Z83220-4|CAC42264.1| 617|Caenorhabditis elegans Hypothetical pr... 28 4.8
U64598-5|AAK39217.3| 638|Caenorhabditis elegans Mechanosensory ... 28 4.8
U23521-8|AAC46810.4| 505|Caenorhabditis elegans Hypothetical pr... 27 8.4
>U41625-5|AAA83327.1| 700|Caenorhabditis elegans Suppressor of
activated let-60ras protein 5 protein.
Length = 700
Score = 41.9 bits (94), Expect = 4e-04
Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 18/192 (9%)
Frame = +3
Query: 108 IKMPYNYNFVFGDKNVQVP--------AHLNFGQFMLEHIRQWNDQIAIENA---DTGEK 254
+K+ NYN V D N+++ A LN+ + ++E R IA+ NA +T +
Sbjct: 100 VKLHQNYNQVI-DHNLKINERPRWFNGATLNYTENVIE--RGTATDIAVLNASIEETVTE 156
Query: 255 LSYKEIAQYVVNLSASLTSLGVGRGDTVALGSEKHNEFVPTLLAIVLTGATYTPYDLKVG 434
+Y + + V ++ SL + G+G GDTV + + + A GA + + G
Sbjct: 157 YTYDNLRKDVYRIATSLRNYGIGPGDTVCGFVPNTYDTLVAVFATAAVGAAWCSASVDFG 216
Query: 435 KASLKHKLSVVKPKYFIYSNKFWLTYSDVL-----KSFDCIQTYFTLED--NSEGVVSIK 593
A + + V PK N +TY L K + ++ TLE S+ S+K
Sbjct: 217 PAGVLDRFRQVHPKVLFTVNH--VTYKKKLIDQTDKINEIVKELPTLEKIVVSDTFTSVK 274
Query: 594 SLASKYVDVDLF 629
A+KY D F
Sbjct: 275 FDATKYNQSDKF 286
>AY091467-1|AAM44123.1| 700|Caenorhabditis elegans SUR-5 protein.
Length = 700
Score = 41.9 bits (94), Expect = 4e-04
Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 18/192 (9%)
Frame = +3
Query: 108 IKMPYNYNFVFGDKNVQVP--------AHLNFGQFMLEHIRQWNDQIAIENA---DTGEK 254
+K+ NYN V D N+++ A LN+ + ++E R IA+ NA +T +
Sbjct: 100 VKLHQNYNQVI-DHNLKINERPRWFNGATLNYTENVIE--RGTATDIAVLNASIEETVTE 156
Query: 255 LSYKEIAQYVVNLSASLTSLGVGRGDTVALGSEKHNEFVPTLLAIVLTGATYTPYDLKVG 434
+Y + + V ++ SL + G+G GDTV + + + A GA + + G
Sbjct: 157 YTYDNLRKDVYRIATSLRNYGIGPGDTVCGFVPNTYDTLVAVFATAAVGAAWCSASVDFG 216
Query: 435 KASLKHKLSVVKPKYFIYSNKFWLTYSDVL-----KSFDCIQTYFTLED--NSEGVVSIK 593
A + + V PK N +TY L K + ++ TLE S+ S+K
Sbjct: 217 PAGVLDRFRQVHPKVLFTVNH--VTYKKKLIDQTDKINEIVKELPTLEKIVVSDTFTSVK 274
Query: 594 SLASKYVDVDLF 629
A+KY D F
Sbjct: 275 FDATKYNQSDKF 286
>U40938-6|AAA81698.1| 655|Caenorhabditis elegans Hypothetical
protein D1009.1a protein.
Length = 655
Score = 37.5 bits (83), Expect = 0.008
Identities = 24/98 (24%), Positives = 43/98 (43%)
Frame = +3
Query: 183 QFMLEHIRQWNDQIAIENADTGEKLSYKEIAQYVVNLSASLTSLGVGRGDTVALGSEKHN 362
+ L ++Q +++AI ++G +L+Y+E+ + S G GD VAL E
Sbjct: 84 EIFLNQVKQHPNKVAIIEIESGRQLTYQELNALANQYANLYVSEGYKMGDVVALFMENSI 143
Query: 363 EFVPTLLAIVLTGATYTPYDLKVGKASLKHKLSVVKPK 476
+F L + G + + L H ++V K K
Sbjct: 144 DFFAIWLGLSKIGVVSAFINSNLKLEPLAHSINVSKCK 181
>Z66495-9|CAH19100.1| 670|Caenorhabditis elegans Hypothetical
protein C36A4.9b protein.
Length = 670
Score = 34.3 bits (75), Expect = 0.074
Identities = 21/52 (40%), Positives = 26/52 (50%)
Frame = +3
Query: 258 SYKEIAQYVVNLSASLTSLGVGRGDTVALGSEKHNEFVPTLLAIVLTGATYT 413
+Y E+ VV SA L S GV RGD VAL E +LA GA ++
Sbjct: 118 TYNELHAQVVQFSAVLRSHGVKRGDVVALYLPMIPELAVAMLACARIGAMHS 169
>Z66495-8|CAA91274.1| 680|Caenorhabditis elegans Hypothetical
protein C36A4.9a protein.
Length = 680
Score = 34.3 bits (75), Expect = 0.074
Identities = 21/52 (40%), Positives = 26/52 (50%)
Frame = +3
Query: 258 SYKEIAQYVVNLSASLTSLGVGRGDTVALGSEKHNEFVPTLLAIVLTGATYT 413
+Y E+ VV SA L S GV RGD VAL E +LA GA ++
Sbjct: 128 TYNELHAQVVQFSAVLRSHGVKRGDVVALYLPMIPELAVAMLACARIGAMHS 179
>AF016449-14|AAG23991.1| 517|Caenorhabditis elegans Hypothetical
protein C50H11.1 protein.
Length = 517
Score = 33.1 bits (72), Expect = 0.17
Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +3
Query: 240 DTGEKLSYKEIAQYVVNLSASLTS-LGVGRGDTVALGSEKHNEFVPTLLAIVLTGATYTP 416
D G K++Y + Q + +LT + +GD V K + A + GA Y P
Sbjct: 43 DDGRKITYGDFVQRAGQYATALTEKYKIKKGDRVMARVSKTTDTAALYAACLQIGALYVP 102
Query: 417 YDLKVGKASLKHKLSVVKPKYFI 485
+ + ++ H + KP +I
Sbjct: 103 VNPALTQSEAAHYVKDAKPSLWI 125
>Z70684-10|CAA94602.2| 684|Caenorhabditis elegans Hypothetical
protein F28D1.9 protein.
Length = 684
Score = 32.7 bits (71), Expect = 0.22
Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 2/110 (1%)
Frame = +3
Query: 168 HLNFG--QFMLEHIRQWNDQIAIENADTGEKLSYKEIAQYVVNLSASLTSLGVGRGDTVA 341
H N G + L+ +++ ++ A+ + +T +Y E + + LG GD VA
Sbjct: 106 HQNKGIHELFLDIVKKNPNKPAMIDIETNTTETYAEFNAHCNRYANYFQGLGYRSGDVVA 165
Query: 342 LGSEKHNEFVPTLLAIVLTGATYTPYDLKVGKASLKHKLSVVKPKYFIYS 491
L E EFV + + G + + + L H ++ K K I S
Sbjct: 166 LYMENSVEFVAAWMGLAKIGVVTAWINSNLKREQLVHCITASKTKAIITS 215
>Z81027-1|CAB02686.1| 566|Caenorhabditis elegans Hypothetical
protein AH10.1 protein.
Length = 566
Score = 31.9 bits (69), Expect = 0.39
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Frame = +3
Query: 222 IAIENADTGEKLSYKEIAQYVVNLSASLTSLGVGRGDTVALGSEKHNEFVPTLLAIVLTG 401
+ I+ T +K Y+++ V +L+ +L LG GD A EF+ +LA++ G
Sbjct: 37 VFIDAETTTKKKLYRDVEPTVNSLATALVKLGFKPGDVAAQAFPNCPEFLIAMLAVMKCG 96
Query: 402 -------ATYTPYDLKV 431
A +T Y+L++
Sbjct: 97 GAMSNASAIFTDYELQL 113
>Z69883-4|CAA93742.2| 480|Caenorhabditis elegans Hypothetical
protein C27C12.5 protein.
Length = 480
Score = 31.9 bits (69), Expect = 0.39
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -3
Query: 277 CAISLYDSFSPVSAFSIAIWSFHCRICSNMNCPKFK 170
C ++ YD S F FHC I +NCPK K
Sbjct: 263 CLVAGYDQSCHCSPFFNRFTRFHCSIDELLNCPKLK 298
>U58758-13|AAB93427.1| 565|Caenorhabditis elegans Hypothetical
protein ZK1127.2 protein.
Length = 565
Score = 31.9 bits (69), Expect = 0.39
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Frame = +3
Query: 228 IENADTGEKLSYKEIAQYVVNLSASLTSLGVGRGDTVALGSEKHNEFVPTLLAIVLTG-- 401
I+ T +K YK++ V +L+ +L LG GD + EF+ +LA++ G
Sbjct: 39 IDAETTTKKKLYKDVEPTVNSLATALVKLGFKPGDVASQAFPNCPEFLVAMLAVMKCGGA 98
Query: 402 -----ATYTPYDLKV 431
A +T Y+L++
Sbjct: 99 MSNASAIFTDYELQL 113
>AF098989-3|AAK18953.2| 569|Caenorhabditis elegans Hypothetical
protein F47G6.2 protein.
Length = 569
Score = 31.1 bits (67), Expect = 0.69
Identities = 24/101 (23%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Frame = +3
Query: 123 NYN-FVFGDKNVQVPAHLNF-GQFMLEHIRQWNDQIAIENADTGEKLS--YKEIAQYVVN 290
+YN +V G P ++F Q + + I ++ + EKLS + +I + +
Sbjct: 12 DYNGWVTGVSKAPPPKQIDFDSQTIPQLIYTKSEMDRVAAVFDSEKLSLTFSKIVSEMES 71
Query: 291 LSASLTSLGVGRGDTVALGSEKHNEFVPTLLAIVLTGATYT 413
L+A S+G+ +GD V + H++ + LA G ++
Sbjct: 72 LAAGFLSIGLKQGDRVLVAGSNHSQVMLCALACSRAGLVFS 112
>AL132902-6|CAC14421.1| 316|Caenorhabditis elegans Hypothetical
protein Y71A12B.6 protein.
Length = 316
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = -3
Query: 397 VNTIASKVGTNSLCFSDPSATVSPLPTPRLVKDAERFTTYCAISLYDSFSPVSAFSIAIW 218
VN AS GTN FSDP+ +++P V ++ ++ F+ + SI +
Sbjct: 233 VNKTASCNGTNEFTFSDPTLSLNPTGYIWGVDQPSGTLAKDSLCVHYGFNSTTKQSIGVD 292
Query: 217 SFHCRICS-NMNC 182
+ C + S N C
Sbjct: 293 DYSCTVSSTNGTC 305
>Z54282-1|CAA91056.2| 1201|Caenorhabditis elegans Hypothetical
protein F52E10.1 protein.
Length = 1201
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3
Query: 195 EHIRQWNDQIAIENADTGEKLSYKEIAQ 278
+ I WND I + D EKLS EI Q
Sbjct: 741 DSINNWNDCSTIRDVDLSEKLSVAEIVQ 768
>X58520-1|CAA41410.1| 1203|Caenorhabditis elegans zinc-finger
protein protein.
Length = 1203
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3
Query: 195 EHIRQWNDQIAIENADTGEKLSYKEIAQ 278
+ I WND I + D EKLS EI Q
Sbjct: 743 DSINNWNDCSTIRDVDLSEKLSVAEIVQ 770
>AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical
protein Y66D12A.14 protein.
Length = 2870
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +3
Query: 258 SYKEIAQYVVNLSAS-LTSLG--VGRGDTVALGSEKHNEFVPTLLAIVLTGATYTPYD 422
+Y+ ++QY LS LTS + D +++ + E LA+ TGA Y P D
Sbjct: 2158 AYRRLSQYSSCLSKKFLTSKAQPIRSDDVISVAGTRSTETTMKCLAVQFTGAAYLPID 2215
>Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical
protein K10G4.5 protein.
Length = 1251
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 10/55 (18%)
Frame = +3
Query: 408 YTPYDLKVGKASLKHKLSVV---KPKYFIY---SNKFWLTYSD----VLKSFDCI 542
Y P + K G+ +KH+ S V KP Y +N W+TY +K DCI
Sbjct: 84 YKPNNQKTGRPDIKHRFSRVSYTKPTEVFYHGRTNDTWITYEPQQPIKIKDRDCI 138
>Z81071-2|CAB03012.1| 618|Caenorhabditis elegans Hypothetical
protein F28F8.2 protein.
Length = 618
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +3
Query: 258 SYKEIAQYVVNLSASLTSLGVGRGDTVALGSEKHNEFVPTLLAIVLTG 401
+Y+E V ++ASL +LG+ +GD V + + E+V A G
Sbjct: 88 TYEEFYHDVRQMAASLYTLGLEKGDRVGVWGPNYYEWVVLQYACAFAG 135
>U97550-5|AAK18982.2| 497|Caenorhabditis elegans Hypothetical
protein T20F7.7 protein.
Length = 497
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/54 (27%), Positives = 32/54 (59%)
Frame = +3
Query: 177 FGQFMLEHIRQWNDQIAIENADTGEKLSYKEIAQYVVNLSASLTSLGVGRGDTV 338
F +LE++ ++ + A+ + + + ++++EI Q V L L LG+ +GDT+
Sbjct: 10 FHDLILENVVKFGIRQALVHDN--QVITFEEIPQLVSKLVYKLLELGISQGDTI 61
>AL132948-37|CAD31830.2| 410|Caenorhabditis elegans Hypothetical
protein Y39B6A.38 protein.
Length = 410
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -3
Query: 466 TTLSLCFNEAFPTFKS*GV*VAPVNTIASKVGTNSLCFSDPSATVSPLPTPRLVKDAERF 287
TTLSL + + PT +S T AS T ++P P PR++++ +R
Sbjct: 255 TTLSLWSSHSDPTAQSIST-TTTTTTFASFPATPDSIPPPIPQRITPSPLPRVIEEEKRI 313
Query: 286 TT 281
TT
Sbjct: 314 TT 315
>Z83220-4|CAC42264.1| 617|Caenorhabditis elegans Hypothetical
protein C34B7.4 protein.
Length = 617
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 387 IVLTGATYTPYDLKVGKASLKHKLSVVKPKYFIYSNKFW 503
IVL G Y+ +K+GK +LK LS + ++ S FW
Sbjct: 564 IVLKGGVYS---IKIGKRALKFPLSQCRRRFVDPSQLFW 599
>U64598-5|AAK39217.3| 638|Caenorhabditis elegans Mechanosensory
abnormality protein18 protein.
Length = 638
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/78 (23%), Positives = 33/78 (42%)
Frame = +3
Query: 174 NFGQFMLEHIRQWNDQIAIENADTGEKLSYKEIAQYVVNLSASLTSLGVGRGDTVALGSE 353
+F + I +AI + D+G++ Y EI + + L L V G VA+ +
Sbjct: 18 SFHDYFFSKISAHGSNLAIVDVDSGKQWRYSEIRNWCEMCATRLKELQVTSGSRVAVITG 77
Query: 354 KHNEFVPTLLAIVLTGAT 407
+ + LA + G +
Sbjct: 78 TTGQAIFVHLACSIIGCS 95
>U23521-8|AAC46810.4| 505|Caenorhabditis elegans Hypothetical
protein F41C3.3 protein.
Length = 505
Score = 27.5 bits (58), Expect = 8.4
Identities = 18/87 (20%), Positives = 33/87 (37%), Gaps = 1/87 (1%)
Frame = +3
Query: 240 DTGEKLSYKEIAQYVVNLSASLTS-LGVGRGDTVALGSEKHNEFVPTLLAIVLTGATYTP 416
D K +Y E + + +LT + +GD V K + +A + GA Y P
Sbjct: 42 DGDRKTTYGEFVKRTGQYATALTEKYNIKKGDRVMARVSKTTDTAALYIACLQIGALYIP 101
Query: 417 YDLKVGKASLKHKLSVVKPKYFIYSNK 497
+ ++ H + P + N+
Sbjct: 102 VNPGYTESEAAHYIKDATPSILVSCNE 128
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,903,855
Number of Sequences: 27780
Number of extensions: 365301
Number of successful extensions: 1050
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1050
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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