Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30i20
(709 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical pr... 31 1.1
U40030-6|AAA81135.3| 431|Caenorhabditis elegans Hypothetical pr... 31 1.1
U40030-5|AAR12976.2| 506|Caenorhabditis elegans Hypothetical pr... 31 1.1
AL132948-10|CAC51066.1| 366|Caenorhabditis elegans Hypothetical... 31 1.1
AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical... 31 1.1
AL023844-8|CAA19534.1| 396|Caenorhabditis elegans Hypothetical ... 29 2.5
Z93374-5|CAB07557.1| 935|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z77670-1|CAB01247.1| 484|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z69385-8|CAA93423.1| 529|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z22179-14|CAI06052.1| 443|Caenorhabditis elegans Hypothetical p... 28 7.5
U18385-1|AAA62505.1| 276|Caenorhabditis elegans collagen protein. 28 7.5
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 28 7.5
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/... 28 7.5
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 28 7.5
Z92775-5|CAJ90510.1| 263|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z83222-3|CAJ90492.1| 263|Caenorhabditis elegans Hypothetical pr... 27 9.9
>Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical protein
Y37A1B.1a protein.
Length = 1222
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/83 (22%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Frame = +1
Query: 352 AQEIGDEKLQVVQILQDL---IDNKQRSLDSDHKKLLSCIEVTTNG--TTKEEVTPTQDV 516
A+ E+L +++ L++ ID K++ +DS + K + T+ +T++E + +
Sbjct: 1068 AKSTVSEQLSLIEQLREAKAEIDKKKKDIDSHYHKSNKKLNETSAQLKSTQDENSALKQA 1127
Query: 517 LSKTEKEASVLTTPHQNIAPPPP 585
L ++ A + + + + PPPP
Sbjct: 1128 LQDCKRHADRIFSVVEKVMPPPP 1150
>U40030-6|AAA81135.3| 431|Caenorhabditis elegans Hypothetical
protein T13C2.3a protein.
Length = 431
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +1
Query: 469 TTNGTTKEEVTPTQDVLSKTEKEASVLTTPHQNIAPPPPPE 591
TT TT T T + + T A TTP + PP PP+
Sbjct: 322 TTTSTTTTTTTTTTEEPTTTTTSAPTTTTPEPSKYPPLPPQ 362
>U40030-5|AAR12976.2| 506|Caenorhabditis elegans Hypothetical
protein T13C2.3b protein.
Length = 506
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +1
Query: 469 TTNGTTKEEVTPTQDVLSKTEKEASVLTTPHQNIAPPPPPE 591
TT TT T T + + T A TTP + PP PP+
Sbjct: 397 TTTSTTTTTTTTTTEEPTTTTTSAPTTTTPEPSKYPPLPPQ 437
>AL132948-10|CAC51066.1| 366|Caenorhabditis elegans Hypothetical
protein Y39B6A.11 protein.
Length = 366
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = +1
Query: 424 SLDSDHKKLLSCIEVTTNGTTK---EEVTPTQDVLSKTEKEA-SVLTTPHQNIAPP 579
S+ +H+KLL+ + TT +E PTQ V+ +EA V+ P + +APP
Sbjct: 208 SMTENHEKLLAEMRAQAPPTTHVTFQEAPPTQTVVPPVLQEAPPVIAPPTEPVAPP 263
>AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/83 (22%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Frame = +1
Query: 352 AQEIGDEKLQVVQILQDL---IDNKQRSLDSDHKKLLSCIEVTTNG--TTKEEVTPTQDV 516
A+ E+L +++ L++ ID K++ +DS + K + T+ +T++E + +
Sbjct: 1068 AKSTVSEQLSLIEQLREAKAEIDKKKKDIDSHYHKSNKKLNETSAQLKSTQDENSALKQA 1127
Query: 517 LSKTEKEASVLTTPHQNIAPPPP 585
L ++ A + + + + PPPP
Sbjct: 1128 LQDCKRHADRIFSVVEKVMPPPP 1150
>AL023844-8|CAA19534.1| 396|Caenorhabditis elegans Hypothetical
protein Y48A6B.13 protein.
Length = 396
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +1
Query: 493 EVTPTQDVLSKTEKEASVLTTPHQNI--APPPPPERTN 600
E TP +D + +KE+ +T+P APPPPP R N
Sbjct: 294 EETP-EDKRKRLQKESKSVTSPPPPTQKAPPPPPTRMN 330
>Z93374-5|CAB07557.1| 935|Caenorhabditis elegans Hypothetical
protein C06C6.7 protein.
Length = 935
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +1
Query: 496 VTP--TQDVLSKTEKEASVLTTPHQNIAPPPP 585
+TP +QD S+ E E V PH + PPPP
Sbjct: 849 ITPDSSQDSQSEREAERFVARKPHTSQLPPPP 880
>Z77670-1|CAB01247.1| 484|Caenorhabditis elegans Hypothetical
protein W05E10.1 protein.
Length = 484
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +1
Query: 91 SI*TIAMLNQTSTEALLSAAYVENYLDCVENLPNDLQRHLSRMRELD 231
S+ TIAM N TS +A++ Y+E C ++ L L+R+ ++D
Sbjct: 275 SVFTIAMYNWTSHQAIVYGGYIET-ASCALSVSQYLVIGLTRVGKID 320
>Z69385-8|CAA93423.1| 529|Caenorhabditis elegans Hypothetical
protein ZK593.9 protein.
Length = 529
Score = 28.3 bits (60), Expect = 5.7
Identities = 9/32 (28%), Positives = 21/32 (65%)
Frame = -1
Query: 292 LILYKYLDAFLPHANIPYMLRQAPAYVINVSE 197
L+ K+ +LP ++PY+L++ +++ V+E
Sbjct: 11 LMNQKFYHGYLPREDLPYVLKKKGGFILRVTE 42
>Z22179-14|CAI06052.1| 443|Caenorhabditis elegans Hypothetical
protein F58A4.14 protein.
Length = 443
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +1
Query: 481 TTKEEVTPTQDVLSKTEKEASVLTTPHQNIAPPPPPER 594
+ ++E+ T + ++ + V+ P PPPPPER
Sbjct: 4 SNQDEIIGTDVIPNEQDNPEEVVPEPTSLDVPPPPPER 41
>U18385-1|AAA62505.1| 276|Caenorhabditis elegans collagen protein.
Length = 276
Score = 27.9 bits (59), Expect = 7.5
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +1
Query: 349 AAQEIGDEKLQVVQILQDLIDNKQRSLDSDHKKLLSCIEVTTNGTTKEEVTP--TQDVLS 522
A Q++ D+K Q QDL+D + + D+DH+ L E + +E+ P QD
Sbjct: 78 AHQDVQDQKDH--QDFQDLLDQPEETEDADHQDQLEDQESKDHREMQEDQEPPDVQDQQD 135
Query: 523 KTEKEASVLTTPHQNI 570
E + + Q++
Sbjct: 136 HVENQEPSTSQDSQDV 151
>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
c protein.
Length = 1510
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +1
Query: 421 RSLDSDHKKLLSCIEVTTNGTTKEEVTPTQDVLSKTEKEASVLTTPHQNIAPPPPP 588
R+ D +LS + + T+ + + T DV + K + + P + +PPPPP
Sbjct: 256 RNTYEDEGGMLSGVIMDTSDHYERDYTMDHDVGPSSMKMSPIPPPPIKEESPPPPP 311
>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
a protein.
Length = 1507
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +1
Query: 421 RSLDSDHKKLLSCIEVTTNGTTKEEVTPTQDVLSKTEKEASVLTTPHQNIAPPPPP 588
R+ D +LS + + T+ + + T DV + K + + P + +PPPPP
Sbjct: 256 RNTYEDEGGMLSGVIMDTSDHYERDYTMDHDVGPSSMKMSPIPPPPIKEESPPPPP 311
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/53 (26%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +1
Query: 379 QVVQILQDLIDNKQRSLDSDHKKLLSCIEVTTNGTTKEE-VTPTQDVLSKTEK 534
+ ++ + +++ +D+ KKL + IEV TN ++++ V QDV+ + E+
Sbjct: 2045 ETIETVTPILEEYTTLVDNIEKKLANEIEVPTNDPSRQDLVQQLQDVILECEE 2097
>Z92775-5|CAJ90510.1| 263|Caenorhabditis elegans Hypothetical
protein C06H5.8 protein.
Length = 263
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = +1
Query: 25 TCFAYSLSKCF*CNLSDYYYERSI*TIAMLNQTSTEALLSAAYVENYLDCVENLPNDLQ 201
TCF L + F C +D + I N LSA + YLDC++N +Q
Sbjct: 168 TCFQL-LRRIFPCPWADGRLYITAELILFGNNLEQAIWLSARNTQEYLDCLDNTKTHIQ 225
>Z83222-3|CAJ90492.1| 263|Caenorhabditis elegans Hypothetical
protein C06H5.8 protein.
Length = 263
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = +1
Query: 25 TCFAYSLSKCF*CNLSDYYYERSI*TIAMLNQTSTEALLSAAYVENYLDCVENLPNDLQ 201
TCF L + F C +D + I N LSA + YLDC++N +Q
Sbjct: 168 TCFQL-LRRIFPCPWADGRLYITAELILFGNNLEQAIWLSARNTQEYLDCLDNTKTHIQ 225
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,878,717
Number of Sequences: 27780
Number of extensions: 240357
Number of successful extensions: 1168
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1156
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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