Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30i13
(782 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT003318-1|AAO25078.1| 517|Drosophila melanogaster AT26991p pro... 32 0.77
BT001317-1|AAN71072.1| 517|Drosophila melanogaster AT15066p pro... 32 0.77
AE014296-204|AAN11465.1| 517|Drosophila melanogaster CG9130-PB,... 32 0.77
AE014296-203|AAN11464.1| 517|Drosophila melanogaster CG9130-PA,... 32 0.77
AJ459772-1|CAD30834.1| 1478|Drosophila melanogaster Fanconi anem... 31 2.3
AE014297-2866|AAN13836.2| 1478|Drosophila melanogaster CG17269-P... 31 2.3
BT004481-1|AAO42645.1| 771|Drosophila melanogaster LD34250p pro... 29 5.4
AE014298-1948|AAF48305.1| 789|Drosophila melanogaster CG9941-PA... 29 5.4
AY089441-1|AAL90179.1| 251|Drosophila melanogaster AT26009p pro... 29 7.2
AE014296-202|AAF47461.2| 251|Drosophila melanogaster CG9129-PA ... 29 7.2
>BT003318-1|AAO25078.1| 517|Drosophila melanogaster AT26991p
protein.
Length = 517
Score = 32.3 bits (70), Expect = 0.77
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +1
Query: 304 KCAKCKKIIDLVFGPNKPIVHEDSKDAHVFNKASDKCKD-VALSRLSADENSCVKCEKII 480
KC KC +F + PI +D HV+ K ++ CK + LS L +++
Sbjct: 84 KCGKCA-----LFTLDSPITDKDVLQVHVYKKRTESCKFLIGLSELKVKP----IFDRVK 134
Query: 481 DEIFGKDAKWDDKYMLGNATRLP 549
+ ++ W+D MLG+ +LP
Sbjct: 135 ESFDIENPDWEDA-MLGHIAQLP 156
>BT001317-1|AAN71072.1| 517|Drosophila melanogaster AT15066p
protein.
Length = 517
Score = 32.3 bits (70), Expect = 0.77
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +1
Query: 304 KCAKCKKIIDLVFGPNKPIVHEDSKDAHVFNKASDKCKD-VALSRLSADENSCVKCEKII 480
KC KC +F + PI +D HV+ K ++ CK + LS L +++
Sbjct: 84 KCGKCA-----LFTLDSPITDKDVLQVHVYKKRTESCKFLIGLSELKVKP----IFDRVK 134
Query: 481 DEIFGKDAKWDDKYMLGNATRLP 549
+ ++ W+D MLG+ +LP
Sbjct: 135 ESFDIENPDWEDA-MLGHIAQLP 156
>AE014296-204|AAN11465.1| 517|Drosophila melanogaster CG9130-PB,
isoform B protein.
Length = 517
Score = 32.3 bits (70), Expect = 0.77
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +1
Query: 304 KCAKCKKIIDLVFGPNKPIVHEDSKDAHVFNKASDKCKD-VALSRLSADENSCVKCEKII 480
KC KC +F + PI +D HV+ K ++ CK + LS L +++
Sbjct: 84 KCGKCA-----LFTLDSPITDKDVLQVHVYKKRTESCKFLIGLSELKVKP----IFDRVK 134
Query: 481 DEIFGKDAKWDDKYMLGNATRLP 549
+ ++ W+D MLG+ +LP
Sbjct: 135 ESFDIENPDWEDA-MLGHIAQLP 156
>AE014296-203|AAN11464.1| 517|Drosophila melanogaster CG9130-PA,
isoform A protein.
Length = 517
Score = 32.3 bits (70), Expect = 0.77
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +1
Query: 304 KCAKCKKIIDLVFGPNKPIVHEDSKDAHVFNKASDKCKD-VALSRLSADENSCVKCEKII 480
KC KC +F + PI +D HV+ K ++ CK + LS L +++
Sbjct: 84 KCGKCA-----LFTLDSPITDKDVLQVHVYKKRTESCKFLIGLSELKVKP----IFDRVK 134
Query: 481 DEIFGKDAKWDDKYMLGNATRLP 549
+ ++ W+D MLG+ +LP
Sbjct: 135 ESFDIENPDWEDA-MLGHIAQLP 156
>AJ459772-1|CAD30834.1| 1478|Drosophila melanogaster Fanconi anemia
complementationgroup D2 protein protein.
Length = 1478
Score = 30.7 bits (66), Expect = 2.3
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -1
Query: 500 SLPKISSIIFSHLTQLFSSALNLDKATSLHLSLALLKTCASLESSCT 360
S+P+++++ F + + S LNL A LH L L SL+S +
Sbjct: 1123 SVPQLANLTFQYFLKYEKSVLNLSTAVHLHRLLCNLLKLGSLQSDAS 1169
>AE014297-2866|AAN13836.2| 1478|Drosophila melanogaster CG17269-PA
protein.
Length = 1478
Score = 30.7 bits (66), Expect = 2.3
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -1
Query: 500 SLPKISSIIFSHLTQLFSSALNLDKATSLHLSLALLKTCASLESSCT 360
S+P+++++ F + + S LNL A LH L L SL+S +
Sbjct: 1123 SVPQLANLTFQYFLKYEKSVLNLSTAVHLHRLLCNLLKLGSLQSDAS 1169
>BT004481-1|AAO42645.1| 771|Drosophila melanogaster LD34250p
protein.
Length = 771
Score = 29.5 bits (63), Expect = 5.4
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 613 AKNVGEK-LKEAAICLAINDKSRQKSSLGDG 702
+KNV K LK+ CL +D KSS GDG
Sbjct: 548 SKNVSSKSLKQVVACLEADDDVDNKSSTGDG 578
>AE014298-1948|AAF48305.1| 789|Drosophila melanogaster CG9941-PA
protein.
Length = 789
Score = 29.5 bits (63), Expect = 5.4
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 613 AKNVGEK-LKEAAICLAINDKSRQKSSLGDG 702
+KNV K LK+ CL +D KSS GDG
Sbjct: 566 SKNVSSKSLKQVVACLEADDDVDNKSSTGDG 596
>AY089441-1|AAL90179.1| 251|Drosophila melanogaster AT26009p
protein.
Length = 251
Score = 29.1 bits (62), Expect = 7.2
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +1
Query: 304 KCAKCKKIIDLVFGPNKPIVHEDSKDAHVFNKASDKCK 417
KC KC +F PI ED HV+ K ++ CK
Sbjct: 70 KCGKCT-----LFTLESPITDEDVMHIHVYKKRTESCK 102
>AE014296-202|AAF47461.2| 251|Drosophila melanogaster CG9129-PA
protein.
Length = 251
Score = 29.1 bits (62), Expect = 7.2
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +1
Query: 304 KCAKCKKIIDLVFGPNKPIVHEDSKDAHVFNKASDKCK 417
KC KC +F PI ED HV+ K ++ CK
Sbjct: 70 KCGKCT-----LFTLESPITDEDVMHIHVYKKRTESCK 102
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,419,455
Number of Sequences: 53049
Number of extensions: 681602
Number of successful extensions: 1820
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1820
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3613676352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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