Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30i13
(782 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81512-6|CAB04171.3| 455|Caenorhabditis elegans Hypothetical pr... 33 0.23
U21323-7|AAA62551.1| 465|Caenorhabditis elegans Hypothetical pr... 31 0.70
AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical... 31 1.2
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 30 1.6
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 30 1.6
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 30 1.6
Z81564-9|CAB04575.1| 724|Caenorhabditis elegans Hypothetical pr... 29 2.8
U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily ass... 29 3.7
Z83114-4|CAB05554.4| 739|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z80214-1|CAB02262.1| 500|Caenorhabditis elegans Hypothetical pr... 29 5.0
U58085-1|AAC47122.1| 780|Caenorhabditis elegans CUL-3 protein. 28 8.7
AC084161-1|ABD63205.1| 1375|Caenorhabditis elegans Hypothetical ... 28 8.7
AC024744-3|AAK72067.1| 777|Caenorhabditis elegans Cullin protei... 28 8.7
>Z81512-6|CAB04171.3| 455|Caenorhabditis elegans Hypothetical
protein F25C8.2 protein.
Length = 455
Score = 33.1 bits (72), Expect = 0.23
Identities = 21/78 (26%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Frame = +1
Query: 514 DKYMLGNATRLPNEDLTILPKDNNIGIRLDNTDAKNVGEKLKE--AAICLAINDKSRQKS 687
+KY L + T+ +DL +L +DN+I + + K + +K + + +A+ +KS + +
Sbjct: 74 EKYDLFDKTKPRTDDLWMLDQDNSITLVNGHLVPKKILDKFNDYIRYLNVALYEKSIKIN 133
Query: 688 SLGDGKDVSNQKIEVLKE 741
L +++NQ IE L++
Sbjct: 134 QLSVENEINNQFIEFLRD 151
>U21323-7|AAA62551.1| 465|Caenorhabditis elegans Hypothetical
protein C45G9.8 protein.
Length = 465
Score = 31.5 bits (68), Expect = 0.70
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 8/94 (8%)
Frame = +1
Query: 163 VNKANPAAFLFRISLADCNTHGKIAKSIAILQSKLQKSTKSGSEDEAKCAKCKK------ 324
V+ +P + L + +TH S I +S +K TK+GS+ + K KK
Sbjct: 79 VHHESPDSVLTECATMSTSTHVMPNSSSTISKSATEKKTKTGSKKVTRSKKSKKTKRRSS 138
Query: 325 --IIDLVFGPNKPIVHEDSKDAHVFNKASDKCKD 420
+ +KP+ + KD+ K K KD
Sbjct: 139 TTVTTTTISNSKPVTPDKDKDSKDQRKQRTKRKD 172
>AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical
protein Y66D12A.14 protein.
Length = 2870
Score = 30.7 bits (66), Expect = 1.2
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Frame = -1
Query: 599 KRIPILLSLGK-IVRSSLGKRVAFPSMYLSSHFASLPKI-SSIIFSHL---TQLFSSALN 435
KRI ++ L K + S+L + A P + S+F + I +S+I SH TQ F
Sbjct: 376 KRILFVMELEKPYLSSNLLSQFAEPILLRLSNFHRVQGILNSLIMSHTILRTQYFEDYQY 435
Query: 434 LDKATSLHLSLALLKTCASLESSCTIGLLGPNTKSIIFLHLA 309
L T L++ + ++ S+ L P T +IF H++
Sbjct: 436 LLSGTETFLAILEKSSVSNPLSAIQCSKLSPETLQLIFHHIS 477
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 30.3 bits (65), Expect = 1.6
Identities = 45/176 (25%), Positives = 73/176 (41%), Gaps = 8/176 (4%)
Frame = +1
Query: 238 KSIAILQSKLQKSTKSGSEDEAKCAK-----CKKIIDLVFGPNKPIVHEDSKDAHVFNKA 402
K A + K +K K E +AK K K+ D +K + DA + +
Sbjct: 7682 KQEADAKLKKEKDDKLKQEADAKLKKDKDDKLKQEADAKLKKDKDDKLKQEADAKLKKEK 7741
Query: 403 SDKCKDVALSRLSADENSCVKCEKIIDEIFGKDAKWDDKYMLGNATRLPNEDLTILPKDN 582
DK K +L + ++ +K EK D+ ++A D K +L E L KD
Sbjct: 7742 DDKLKQEKNDKLKQEADAKLKKEK--DDKLKQEA--DAKLKKEKDDKLKQETDAKLKKDK 7797
Query: 583 NIGIRLDNTDAK---NVGEKLKEAAICLAINDKSRQKSSLGDGKDVSNQKIEVLKE 741
+ ++ + DAK + +KLK+ A DK + DGK + +K LK+
Sbjct: 7798 DDKLKQE-ADAKLKKDKDDKLKQEADAKLKKDKDDKLKQEADGK-LKKEKDNKLKQ 7851
Score = 29.1 bits (62), Expect = 3.7
Identities = 45/174 (25%), Positives = 67/174 (38%), Gaps = 6/174 (3%)
Frame = +1
Query: 238 KSIAILQSKLQKSTKSGSEDEAKCAK-----CKKIIDLVFGPNKPIVHEDSKDAHVFNKA 402
K A + K +K K E +AK K K+ D K + DA +
Sbjct: 8194 KQEADAKLKKEKDDKLKQEADAKLKKEKDDKLKQEADAKLKKEKDDKLKQEADAKLKKDK 8253
Query: 403 SDKCKDVALSRLSADENSCVKCEKIIDEIFGKDAKWDDKYMLGNAT-RLPNEDLTILPKD 579
DK K A ++L D++ +K+ E GK K D + A +L E KD
Sbjct: 8254 DDKLKQEADAKLKKDKD-----DKLKQEADGKLKKEKDNKLKQEADGKLKKE------KD 8302
Query: 580 NNIGIRLDNTDAKNVGEKLKEAAICLAINDKSRQKSSLGDGKDVSNQKIEVLKE 741
N + D K +KLK+ A DK + D K + +K + LK+
Sbjct: 8303 NKLKQEADAKLKKEKDDKLKQEADAKLKKDKDDKLKQEADAK-LKKEKDDKLKQ 8355
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 30.3 bits (65), Expect = 1.6
Identities = 45/176 (25%), Positives = 73/176 (41%), Gaps = 8/176 (4%)
Frame = +1
Query: 238 KSIAILQSKLQKSTKSGSEDEAKCAK-----CKKIIDLVFGPNKPIVHEDSKDAHVFNKA 402
K A + K +K K E +AK K K+ D +K + DA + +
Sbjct: 7702 KQEADAKLKKEKDDKLKQEADAKLKKDKDDKLKQEADAKLKKDKDDKLKQEADAKLKKEK 7761
Query: 403 SDKCKDVALSRLSADENSCVKCEKIIDEIFGKDAKWDDKYMLGNATRLPNEDLTILPKDN 582
DK K +L + ++ +K EK D+ ++A D K +L E L KD
Sbjct: 7762 DDKLKQEKNDKLKQEADAKLKKEK--DDKLKQEA--DAKLKKEKDDKLKQETDAKLKKDK 7817
Query: 583 NIGIRLDNTDAK---NVGEKLKEAAICLAINDKSRQKSSLGDGKDVSNQKIEVLKE 741
+ ++ + DAK + +KLK+ A DK + DGK + +K LK+
Sbjct: 7818 DDKLKQE-ADAKLKKDKDDKLKQEADAKLKKDKDDKLKQEADGK-LKKEKDNKLKQ 7871
Score = 29.1 bits (62), Expect = 3.7
Identities = 45/174 (25%), Positives = 67/174 (38%), Gaps = 6/174 (3%)
Frame = +1
Query: 238 KSIAILQSKLQKSTKSGSEDEAKCAK-----CKKIIDLVFGPNKPIVHEDSKDAHVFNKA 402
K A + K +K K E +AK K K+ D K + DA +
Sbjct: 8214 KQEADAKLKKEKDDKLKQEADAKLKKEKDDKLKQEADAKLKKEKDDKLKQEADAKLKKDK 8273
Query: 403 SDKCKDVALSRLSADENSCVKCEKIIDEIFGKDAKWDDKYMLGNAT-RLPNEDLTILPKD 579
DK K A ++L D++ +K+ E GK K D + A +L E KD
Sbjct: 8274 DDKLKQEADAKLKKDKD-----DKLKQEADGKLKKEKDNKLKQEADGKLKKE------KD 8322
Query: 580 NNIGIRLDNTDAKNVGEKLKEAAICLAINDKSRQKSSLGDGKDVSNQKIEVLKE 741
N + D K +KLK+ A DK + D K + +K + LK+
Sbjct: 8323 NKLKQEADAKLKKEKDDKLKQEADAKLKKDKDDKLKQEADAK-LKKEKDDKLKQ 8375
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 30.3 bits (65), Expect = 1.6
Identities = 45/176 (25%), Positives = 73/176 (41%), Gaps = 8/176 (4%)
Frame = +1
Query: 238 KSIAILQSKLQKSTKSGSEDEAKCAK-----CKKIIDLVFGPNKPIVHEDSKDAHVFNKA 402
K A + K +K K E +AK K K+ D +K + DA + +
Sbjct: 7702 KQEADAKLKKEKDDKLKQEADAKLKKDKDDKLKQEADAKLKKDKDDKLKQEADAKLKKEK 7761
Query: 403 SDKCKDVALSRLSADENSCVKCEKIIDEIFGKDAKWDDKYMLGNATRLPNEDLTILPKDN 582
DK K +L + ++ +K EK D+ ++A D K +L E L KD
Sbjct: 7762 DDKLKQEKNDKLKQEADAKLKKEK--DDKLKQEA--DAKLKKEKDDKLKQETDAKLKKDK 7817
Query: 583 NIGIRLDNTDAK---NVGEKLKEAAICLAINDKSRQKSSLGDGKDVSNQKIEVLKE 741
+ ++ + DAK + +KLK+ A DK + DGK + +K LK+
Sbjct: 7818 DDKLKQE-ADAKLKKDKDDKLKQEADAKLKKDKDDKLKQEADGK-LKKEKDNKLKQ 7871
Score = 29.1 bits (62), Expect = 3.7
Identities = 45/174 (25%), Positives = 67/174 (38%), Gaps = 6/174 (3%)
Frame = +1
Query: 238 KSIAILQSKLQKSTKSGSEDEAKCAK-----CKKIIDLVFGPNKPIVHEDSKDAHVFNKA 402
K A + K +K K E +AK K K+ D K + DA +
Sbjct: 8214 KQEADAKLKKEKDDKLKQEADAKLKKEKDDKLKQEADAKLKKEKDDKLKQEADAKLKKDK 8273
Query: 403 SDKCKDVALSRLSADENSCVKCEKIIDEIFGKDAKWDDKYMLGNAT-RLPNEDLTILPKD 579
DK K A ++L D++ +K+ E GK K D + A +L E KD
Sbjct: 8274 DDKLKQEADAKLKKDKD-----DKLKQEADGKLKKEKDNKLKQEADGKLKKE------KD 8322
Query: 580 NNIGIRLDNTDAKNVGEKLKEAAICLAINDKSRQKSSLGDGKDVSNQKIEVLKE 741
N + D K +KLK+ A DK + D K + +K + LK+
Sbjct: 8323 NKLKQEADAKLKKEKDDKLKQEADAKLKKDKDDKLKQEADAK-LKKEKDDKLKQ 8375
>Z81564-9|CAB04575.1| 724|Caenorhabditis elegans Hypothetical
protein K05C4.9 protein.
Length = 724
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -1
Query: 464 LTQLFSSALNLDKATSLHLSLALLKTCASLESSCTIGLLGPNTKSI 327
L++LF S L+ + L + LL+ C S S C + + G N S+
Sbjct: 151 LSELFPSLKTLNVSNILFENDELLRLCVSFPSLCVLDISGTNIASL 196
>U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily assigned
gene nameprotein 278 protein.
Length = 1130
Score = 29.1 bits (62), Expect = 3.7
Identities = 33/148 (22%), Positives = 67/148 (45%), Gaps = 7/148 (4%)
Frame = +1
Query: 358 IVHEDSKDAHVFN-KASDKCKDVALSRLSADE-NSCVKCEKIIDEIFGKDAKWDDKYMLG 531
+ E K+ F + S+K +V +E +C+K ++ E+ G K DD
Sbjct: 803 VTEEREKEIQSFQTQISEKDNEVLTKAERINELETCLKEREV--ELTGMRTKLDDM---- 856
Query: 532 NATRLPNEDLTILPKDNNIGIRLDNTDA--KNVGEKLKEAAICLA-INDKSRQKSSLGDG 702
T+ NE+ T++ DN+I ++D +A + E+LK +A ++++ + + +
Sbjct: 857 --TQQLNEETTVVLFDNSIQEKIDEKEATINEMNERLKSRENEIAKLHEEMYMQKTQNEK 914
Query: 703 KDVSNQKI--EVLKESXLFPLATTEQKH 780
++ K+ E++ E EQ H
Sbjct: 915 RNEEQSKLFQELMFEKEQLEAEKAEQSH 942
>Z83114-4|CAB05554.4| 739|Caenorhabditis elegans Hypothetical
protein K09B11.10 protein.
Length = 739
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -3
Query: 504 CVFTKDLINYLLAFNTTIFIGT*SR*SNIFAFIAGFVENMCIF 376
C FTKD N + ++ + G R SN+F G N+ +F
Sbjct: 452 CDFTKDYCNQWVNYDGVVKYGVMPRDSNVFPVPKGVKGNVAVF 494
>Z80214-1|CAB02262.1| 500|Caenorhabditis elegans Hypothetical
protein C27D8.2 protein.
Length = 500
Score = 28.7 bits (61), Expect = 5.0
Identities = 21/105 (20%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
Frame = +1
Query: 199 ISLADCNTHGKIAKSIAILQSKLQKSTKSGSEDEAKCAKCKKIIDLVFGPNKPIVHEDSK 378
++ A N H + S K++K + ++ A +++IDL+ K + E S
Sbjct: 294 MNTAPFNAHSSLPLSRPAFNMKMKKCKEPKAKPTFDPATAQRVIDLINTDPKTVKTERSV 353
Query: 379 DAHVFNK--ASDKCKDVALSRLSADENSCVKCEKIIDEIFGKDAK 507
+ + F K +K +S+ + ++ C E + +++ K K
Sbjct: 354 EKNKFKKKQKEEKKAKKQISKSTKKKSKCACIEYVKNKLTEKKKK 398
>U58085-1|AAC47122.1| 780|Caenorhabditis elegans CUL-3 protein.
Length = 780
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 316 CKKIIDLVFGPNKPIVHEDSKDAHVFNKASDKCKDVALSRLSADENSC 459
C +I L G + V+ED + + + SD +DV + LS D ++C
Sbjct: 185 CDMLISL--GIDSRTVYEDEFERPLLKETSDYYRDVCKNWLSGDNDAC 230
>AC084161-1|ABD63205.1| 1375|Caenorhabditis elegans Hypothetical
protein Y92H12A.5 protein.
Length = 1375
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 436 LSADENSCVKCEKIIDEIFGKDAKWD 513
LS S V C+ I+D IF +D WD
Sbjct: 182 LSNPSFSSVICQLIVDNIFDRDELWD 207
>AC024744-3|AAK72067.1| 777|Caenorhabditis elegans Cullin protein 3
protein.
Length = 777
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 316 CKKIIDLVFGPNKPIVHEDSKDAHVFNKASDKCKDVALSRLSADENSC 459
C +I L G + V+ED + + + SD +DV + LS D ++C
Sbjct: 185 CDMLISL--GIDSRTVYEDEFERPLLKETSDYYRDVCKNWLSGDNDAC 230
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,212,447
Number of Sequences: 27780
Number of extensions: 372895
Number of successful extensions: 1260
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1259
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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