Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30i12
         (787 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77665-1|AAC51143.1|  268|Homo sapiens RNaseP protein P30 protein.     84   5e-16
BC006991-1|AAH06991.1|  268|Homo sapiens ribonuclease P/MRP 30kD...    84   5e-16
AL590622-3|CAH72457.1|  212|Homo sapiens ribonuclease P (30kD) (...    84   5e-16
AL590622-2|CAC70100.1|  268|Homo sapiens ribonuclease P (30kD) (...    84   5e-16
AL590622-1|CAH72456.1|  254|Homo sapiens ribonuclease P (30kD) (...    84   5e-16

>U77665-1|AAC51143.1|  268|Homo sapiens RNaseP protein P30 protein.
          Length = 268

 Score = 84.2 bits (199), Expect = 5e-16
 Identities = 41/103 (39%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
 Frame = +3

Query: 450 LNILQRITIEFSDSGIVHKLNR-SENIKKYDIIAVIPKTLQAFQYACSSMDIDIISFETE 626
           + IL R+TI  SD    + L   S   + YD++AV PKT + F  AC+ +D+D++     
Sbjct: 71  IKILTRLTIIVSDPSHCNVLRATSSRARLYDVVAVFPKTEKLFHIACTHLDVDLVCITVT 130

Query: 627 GRIPFKVHRKLYKQAVDRGIFFEIMYSPIIRDSTARKNIISNA 755
            ++PF   R     A+DRG+ FE++YSP I+DST R+  IS+A
Sbjct: 131 EKLPFYFKRPPINVAIDRGLAFELVYSPAIKDSTMRRYTISSA 173


>BC006991-1|AAH06991.1|  268|Homo sapiens ribonuclease P/MRP 30kDa
           subunit protein.
          Length = 268

 Score = 84.2 bits (199), Expect = 5e-16
 Identities = 41/103 (39%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
 Frame = +3

Query: 450 LNILQRITIEFSDSGIVHKLNR-SENIKKYDIIAVIPKTLQAFQYACSSMDIDIISFETE 626
           + IL R+TI  SD    + L   S   + YD++AV PKT + F  AC+ +D+D++     
Sbjct: 71  IKILTRLTIIVSDPSHCNVLRATSSRARLYDVVAVFPKTEKLFHIACTHLDVDLVCITVT 130

Query: 627 GRIPFKVHRKLYKQAVDRGIFFEIMYSPIIRDSTARKNIISNA 755
            ++PF   R     A+DRG+ FE++YSP I+DST R+  IS+A
Sbjct: 131 EKLPFYFKRPPINVAIDRGLAFELVYSPAIKDSTMRRYTISSA 173


>AL590622-3|CAH72457.1|  212|Homo sapiens ribonuclease P (30kD)
           (RPP30) protein.
          Length = 212

 Score = 84.2 bits (199), Expect = 5e-16
 Identities = 41/103 (39%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
 Frame = +3

Query: 450 LNILQRITIEFSDSGIVHKLNR-SENIKKYDIIAVIPKTLQAFQYACSSMDIDIISFETE 626
           + IL R+TI  SD    + L   S   + YD++AV PKT + F  AC+ +D+D++     
Sbjct: 25  IKILTRLTIIVSDPSHCNVLRATSSRARLYDVVAVFPKTEKLFHIACTHLDVDLVCITVT 84

Query: 627 GRIPFKVHRKLYKQAVDRGIFFEIMYSPIIRDSTARKNIISNA 755
            ++PF   R     A+DRG+ FE++YSP I+DST R+  IS+A
Sbjct: 85  EKLPFYFKRPPINVAIDRGLAFELVYSPAIKDSTMRRYTISSA 127


>AL590622-2|CAC70100.1|  268|Homo sapiens ribonuclease P (30kD)
           (RPP30) protein.
          Length = 268

 Score = 84.2 bits (199), Expect = 5e-16
 Identities = 41/103 (39%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
 Frame = +3

Query: 450 LNILQRITIEFSDSGIVHKLNR-SENIKKYDIIAVIPKTLQAFQYACSSMDIDIISFETE 626
           + IL R+TI  SD    + L   S   + YD++AV PKT + F  AC+ +D+D++     
Sbjct: 71  IKILTRLTIIVSDPSHCNVLRATSSRARLYDVVAVFPKTEKLFHIACTHLDVDLVCITVT 130

Query: 627 GRIPFKVHRKLYKQAVDRGIFFEIMYSPIIRDSTARKNIISNA 755
            ++PF   R     A+DRG+ FE++YSP I+DST R+  IS+A
Sbjct: 131 EKLPFYFKRPPINVAIDRGLAFELVYSPAIKDSTMRRYTISSA 173


>AL590622-1|CAH72456.1|  254|Homo sapiens ribonuclease P (30kD)
           (RPP30) protein.
          Length = 254

 Score = 84.2 bits (199), Expect = 5e-16
 Identities = 41/103 (39%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
 Frame = +3

Query: 450 LNILQRITIEFSDSGIVHKLNR-SENIKKYDIIAVIPKTLQAFQYACSSMDIDIISFETE 626
           + IL R+TI  SD    + L   S   + YD++AV PKT + F  AC+ +D+D++     
Sbjct: 93  IKILTRLTIIVSDPSHCNVLRATSSRARLYDVVAVFPKTEKLFHIACTHLDVDLVCITVT 152

Query: 627 GRIPFKVHRKLYKQAVDRGIFFEIMYSPIIRDSTARKNIISNA 755
            ++PF   R     A+DRG+ FE++YSP I+DST R+  IS+A
Sbjct: 153 EKLPFYFKRPPINVAIDRGLAFELVYSPAIKDSTMRRYTISSA 195


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,367,786
Number of Sequences: 237096
Number of extensions: 1871410
Number of successful extensions: 10128
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10128
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9590293096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)