Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30i10
         (725 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0692 + 30973171-30973908                                         31   0.93 
03_04_0062 + 16965323-16966024                                         29   2.8  
02_01_0018 + 119890-120238,120331-120424,120518-121529                 29   2.8  
04_03_0926 - 20861383-20862198,20862359-20862430,20862938-208631...    28   6.6  
01_05_0739 + 24807181-24809121                                         28   6.6  
08_02_0656 - 19740436-19741593                                         28   8.7  
05_04_0230 + 19250513-19250633,19250681-19251165                       28   8.7  

>02_05_0692 + 30973171-30973908
          Length = 245

 Score = 31.1 bits (67), Expect = 0.93
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = +2

Query: 290 RAHGGLRECRGPVSVQRARGDYIHGRRPRSH 382
           R  GG R+CRGP   Q  RG     R+PR H
Sbjct: 213 RLAGGGRQCRGPACRQSWRGGGASVRQPRIH 243


>03_04_0062 + 16965323-16966024
          Length = 233

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +1

Query: 265 VATATCGGSGPRWSSRVPRPCFCTTSSRRLYSRP 366
           VATAT       WSS+  RP F T + R +   P
Sbjct: 8   VATATAAAGPTAWSSQKYRPGFATNAQRSIIRPP 41


>02_01_0018 + 119890-120238,120331-120424,120518-121529
          Length = 484

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +3

Query: 282 WGVGPTVVFASAAALFLYNELEATIFTAGDHA 377
           W VGPTV+   AA ++  + L A  +  GD A
Sbjct: 69  WVVGPTVMLLFAAVIYFTSNLLADCYRTGDPA 100


>04_03_0926 -
           20861383-20862198,20862359-20862430,20862938-20863123,
           20863214-20863304,20863698-20863852,20864501-20864579,
           20866797-20867263
          Length = 621

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 17/60 (28%), Positives = 27/60 (45%)
 Frame = -1

Query: 383 DVSVVSGREYSRLELVVQKQGRGTREDHRGPDPPHVAVATQPFRYRFQVRVTNITMCREA 204
           ++S+   R  + L L+     RG        D P + + T PF +  Q  V N+ +C EA
Sbjct: 303 NISLFESRLGAMLFLISALLSRGLERIQADRDDPSLPLVTAPFGHASQ-EVVNLLLCGEA 361


>01_05_0739 + 24807181-24809121
          Length = 646

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 3/82 (3%)
 Frame = +2

Query: 290 RAHGGLRECR-GPVSVQRARGDYIHGR--RPRSHLCVGEDAHQSKHAARNDNSGSTRQSA 460
           +AHGG + C  G V +    G     +  R ++ LC    A    H  R    G+   + 
Sbjct: 508 KAHGGGKRCSWGQVDLNFGVGAPQCDKFARSKTGLCSAHCALVQDHCVRGGTLGA---AT 564

Query: 461 FGYCGPRSFDEVPEEPAASDPY 526
           F +     FDE+   P   DP+
Sbjct: 565 FQFATDAKFDEMEVTPVKGDPH 586


>08_02_0656 - 19740436-19741593
          Length = 385

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = +1

Query: 187 WRVDQLASLHIVIFVTLTWKR*RNG*VATATCGGSGPR 300
           W   Q   +H  ++  + W+  R G VA    GG G R
Sbjct: 309 WPAGQRVGVHASLWEKMVWEEQRGGWVADEEVGGGGVR 346


>05_04_0230 + 19250513-19250633,19250681-19251165
          Length = 201

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = +1

Query: 241 WKR*RNG*VATATCGGSGPRWSSRVPRP 324
           W+R R    A A  GGSG RW     RP
Sbjct: 163 WRRERGRPAAGAGSGGSGGRWQRERDRP 190


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,051,020
Number of Sequences: 37544
Number of extensions: 442620
Number of successful extensions: 1433
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1431
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)