Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30i10
         (725 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2106|AAF49950.3|  295|Drosophila melanogaster CG9760-PB...    30   2.8  
AY084176-1|AAL89914.1|  341|Drosophila melanogaster RE50262p pro...    29   8.5  
AE014296-1257|AAF50562.1|  424|Drosophila melanogaster CG8562-PA...    29   8.5  

>AE014296-2106|AAF49950.3|  295|Drosophila melanogaster CG9760-PB
           protein.
          Length = 295

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +3

Query: 513 PQIHITICWFLSLCYADYVRKHYC 584
           P  HI I W+    YA YV +H+C
Sbjct: 20  PPAHIVILWYFWENYARYVDRHFC 43


>AY084176-1|AAL89914.1|  341|Drosophila melanogaster RE50262p
           protein.
          Length = 341

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 16/50 (32%), Positives = 22/50 (44%)
 Frame = +2

Query: 386 CVGEDAHQSKHAARNDNSGSTRQSAFGYCGPRSFDEVPEEPAASDPYHDL 535
           C G D +++     N+   S+   A  Y GP +F E PE     D  H L
Sbjct: 170 CYGADPNRNFDFHWNEEGASSNPCADTYAGPTAFSE-PETITVRDLMHSL 218


>AE014296-1257|AAF50562.1|  424|Drosophila melanogaster CG8562-PA
           protein.
          Length = 424

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 16/50 (32%), Positives = 22/50 (44%)
 Frame = +2

Query: 386 CVGEDAHQSKHAARNDNSGSTRQSAFGYCGPRSFDEVPEEPAASDPYHDL 535
           C G D +++     N+   S+   A  Y GP +F E PE     D  H L
Sbjct: 253 CYGADPNRNFDFHWNEEGASSNPCADTYAGPTAFSE-PETITVRDLMHSL 301


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,149,608
Number of Sequences: 53049
Number of extensions: 720471
Number of successful extensions: 2243
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2243
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)